RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 A0A1W2PP64 1363 aa16.23■□□□□ 0.19
CHD7-211ENST00000532149 METP08581 1390 aa16.23■□□□□ 0.19
CHD7-211ENST00000532149 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
CHD7-211ENST00000532149 PTCH1Q13635 1447 aa16.21■□□□□ 0.19
CHD7-211ENST00000532149 HAX1O00165 279 aa16.21■□□□□ 0.19
CHD7-211ENST00000532149 EVX2Q03828 476 aa16.21■□□□□ 0.19
CHD7-211ENST00000532149 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
CHD7-211ENST00000532149 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
CHD7-211ENST00000532149 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
CHD7-211ENST00000532149 SAFB2Q14151 953 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHD7-211ENST00000532149 CDC42BPGQ6DT37 1551 aa16.17■□□□□ 0.18
CHD7-211ENST00000532149 CD163L1Q9NR16 1453 aa16.17■□□□□ 0.18
CHD7-211ENST00000532149 GOLGA2Q08379 1002 aa16.17■□□□□ 0.18
CHD7-211ENST00000532149 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
CHD7-211ENST00000532149 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
CHD7-211ENST00000532149 ADAMTSL3P82987 1691 aa16.17■□□□□ 0.18
CHD7-211ENST00000532149 CEP170BQ9Y4F5 1589 aaPredicted RBP16.17■□□□□ 0.18
CHD7-211ENST00000532149 FYB1O15117 783 aa16.16■□□□□ 0.18
CHD7-211ENST00000532149 LTKP29376 864 aa16.16■□□□□ 0.18
CHD7-211ENST00000532149 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
CHD7-211ENST00000532149 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
CHD7-211ENST00000532149 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
CHD7-211ENST00000532149 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
CHD7-211ENST00000532149 MTHFSP49914 203 aa16.15■□□□□ 0.18
CHD7-211ENST00000532149 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
CHD7-211ENST00000532149 ANKLE2Q86XL3 938 aa16.15■□□□□ 0.18
CHD7-211ENST00000532149 NUDT16Q96DE0 195 aaKnown RBP16.15■□□□□ 0.18
CHD7-211ENST00000532149 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
CHD7-211ENST00000532149 PPIP5K1Q6PFW1 1433 aa16.14■□□□□ 0.17
CHD7-211ENST00000532149 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
CHD7-211ENST00000532149 E9PSI1 815 aa16.14■□□□□ 0.17
CHD7-211ENST00000532149 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
CHD7-211ENST00000532149 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
CHD7-211ENST00000532149 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
CHD7-211ENST00000532149 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
CHD7-211ENST00000532149 WDR63Q8IWG1 891 aa16.12■□□□□ 0.17
CHD7-211ENST00000532149 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
CHD7-211ENST00000532149 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
CHD7-211ENST00000532149 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
CHD7-211ENST00000532149 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
CHD7-211ENST00000532149 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
CHD7-211ENST00000532149 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
CHD7-211ENST00000532149 ITSN1Q15811 1721 aa16.1■□□□□ 0.17
CHD7-211ENST00000532149 MON2Q7Z3U7 1717 aa16.1■□□□□ 0.17
CHD7-211ENST00000532149 AKAP12Q02952 1782 aa16.1■□□□□ 0.17
CHD7-211ENST00000532149 SHPRHQ149N8 1683 aa16.09■□□□□ 0.17
CHD7-211ENST00000532149 NEFMP07197 916 aa16.09■□□□□ 0.17
CHD7-211ENST00000532149 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
CHD7-211ENST00000532149 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
CHD7-211ENST00000532149 COG3Q96JB2 828 aa16.08■□□□□ 0.16
CHD7-211ENST00000532149 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
CHD7-211ENST00000532149 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.16
CHD7-211ENST00000532149 APAF1O14727 1248 aa16.07■□□□□ 0.16
CHD7-211ENST00000532149 CT47B1P0C2W7 299 aaPredicted RBP16.07■□□□□ 0.16
CHD7-211ENST00000532149 TOPAZ1Q8N9V7 1692 aa16.06■□□□□ 0.16
CHD7-211ENST00000532149 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
CHD7-211ENST00000532149 FCHSD2O94868 740 aa16.06■□□□□ 0.16
CHD7-211ENST00000532149 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
CHD7-211ENST00000532149 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
CHD7-211ENST00000532149 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
CHD7-211ENST00000532149 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
CHD7-211ENST00000532149 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
CHD7-211ENST00000532149 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
CHD7-211ENST00000532149 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
CHD7-211ENST00000532149 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD7-211ENST00000532149 AAMPQ13685 434 aa16.04■□□□□ 0.16
CHD7-211ENST00000532149 IL16Q14005 1332 aa16.03■□□□□ 0.16
CHD7-211ENST00000532149 WWC1Q8IX03 1113 aa16.03■□□□□ 0.16
CHD7-211ENST00000532149 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
CHD7-211ENST00000532149 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
CHD7-211ENST00000532149 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
CHD7-211ENST00000532149 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
CHD7-211ENST00000532149 MAPK8IP3Q9UPT6 1336 aa16.02■□□□□ 0.16
CHD7-211ENST00000532149 TNNT2P45379 298 aaPredicted RBP16.02■□□□□ 0.16
CHD7-211ENST00000532149 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
CHD7-211ENST00000532149 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
CHD7-211ENST00000532149 IQSEC2Q5JU85 1478 aa16.02■□□□□ 0.15
CHD7-211ENST00000532149 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
CHD7-211ENST00000532149 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
CHD7-211ENST00000532149 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
CHD7-211ENST00000532149 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
CHD7-211ENST00000532149 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
CHD7-211ENST00000532149 USP6P35125 1406 aa16■□□□□ 0.15
CHD7-211ENST00000532149 TTC21BQ7Z4L5 1316 aa15.99■□□□□ 0.15
CHD7-211ENST00000532149 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
CHD7-211ENST00000532149 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
CHD7-211ENST00000532149 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
CHD7-211ENST00000532149 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
CHD7-211ENST00000532149 ACEP12821 1306 aa15.98■□□□□ 0.15
CHD7-211ENST00000532149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHD7-211ENST00000532149 CCDC146Q8IYE0 955 aa15.98■□□□□ 0.15
CHD7-211ENST00000532149 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
CHD7-211ENST00000532149 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
CHD7-211ENST00000532149 PRR36Q9H6K5 1346 aa15.97■□□□□ 0.15
CHD7-211ENST00000532149 NRKQ7Z2Y5 1582 aa15.97■□□□□ 0.15
CHD7-211ENST00000532149 SSH2Q76I76 1423 aa15.97■□□□□ 0.15
CHD7-211ENST00000532149 MS4A1P11836 297 aa15.97■□□□□ 0.15
CHD7-211ENST00000532149 LMOD3Q0VAK6 560 aa15.97■□□□□ 0.15
CHD7-211ENST00000532149 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
CHD7-211ENST00000532149 PLEKHF1Q96S99 279 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms