RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PHF23Q9BUL5 403 aaPredicted RBP29.03■■■□□ 2.24
CCS-207ENST00000531990 NINLQ9Y2I6 1382 aa29.01■■■□□ 2.24
CCS-207ENST00000531990 USP6P35125 1406 aa29.01■■■□□ 2.23
CCS-207ENST00000531990 HDGFL2Q7Z4V5 671 aaPredicted RBP28.99■■■□□ 2.23
CCS-207ENST00000531990 TERF2IPQ9NYB0 399 aa28.99■■■□□ 2.23
CCS-207ENST00000531990 CPSF1Q10570 1443 aaKnown RBP28.98■■■□□ 2.23
CCS-207ENST00000531990 HAP1P54257 671 aaPredicted RBP28.98■■■□□ 2.23
CCS-207ENST00000531990 SLC12A5Q9H2X9 1139 aa28.98■■■□□ 2.23
CCS-207ENST00000531990 KTN1Q86UP2 1357 aaKnown RBP28.98■■■□□ 2.23
CCS-207ENST00000531990 PLEKHG5O94827 1062 aa28.96■■■□□ 2.23
CCS-207ENST00000531990 MON2Q7Z3U7 1717 aa28.96■■■□□ 2.23
CCS-207ENST00000531990 ADAMTS2O95450 1211 aa28.95■■■□□ 2.22
CCS-207ENST00000531990 ABTB2Q8N961 1025 aa28.95■■■□□ 2.22
CCS-207ENST00000531990 ABCA3Q99758 1704 aa28.93■■■□□ 2.22
CCS-207ENST00000531990 CD163L1Q9NR16 1453 aa28.92■■■□□ 2.22
CCS-207ENST00000531990 MARF1Q9Y4F3 1742 aaKnown RBP28.92■■■□□ 2.22
CCS-207ENST00000531990 CABLES1Q8TDN4 633 aa28.92■■■□□ 2.22
CCS-207ENST00000531990 POLR3GLQ9BT43 218 aa28.91■■■□□ 2.22
CCS-207ENST00000531990 SSH2Q76I76 1423 aa28.91■■■□□ 2.22
CCS-207ENST00000531990 A0A1W2PP64 1363 aa28.9■■■□□ 2.22
CCS-207ENST00000531990 NUTM2GQ5VZR2 741 aa28.9■■■□□ 2.22
CCS-207ENST00000531990 NRKQ7Z2Y5 1582 aa28.9■■■□□ 2.22
CCS-207ENST00000531990 TTC21BQ7Z4L5 1316 aa28.9■■■□□ 2.22
CCS-207ENST00000531990 TTC21AQ8NDW8 1320 aa28.9■■■□□ 2.22
CCS-207ENST00000531990 C8orf37Q96NL8 207 aa28.89■■■□□ 2.22
CCS-207ENST00000531990 NLRP13Q86W25 1043 aa28.88■■■□□ 2.21
CCS-207ENST00000531990 ANKRD36BQ8N2N9 1353 aa28.88■■■□□ 2.21
CCS-207ENST00000531990 CRYBG1Q9Y4K1 1723 aa28.87■■■□□ 2.21
CCS-207ENST00000531990 ZEB1P37275 1124 aaPredicted RBP28.87■■■□□ 2.21
CCS-207ENST00000531990 NGLY1Q96IV0 654 aa28.87■■■□□ 2.21
CCS-207ENST00000531990 MYOM1P52179 1685 aa28.86■■■□□ 2.21
CCS-207ENST00000531990 EDC4Q6P2E9 1401 aaKnown RBP28.86■■■□□ 2.21
CCS-207ENST00000531990 PIK3C2AO00443 1686 aa28.85■■■□□ 2.21
CCS-207ENST00000531990 PHRF1Q9P1Y6 1649 aaKnown RBP28.84■■■□□ 2.21
CCS-207ENST00000531990 NLRP6P59044 892 aa28.84■■■□□ 2.21
CCS-207ENST00000531990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.84■■■□□ 2.21
CCS-207ENST00000531990 ZNF772Q68DY9 489 aaPredicted RBP28.82■■■□□ 2.2
CCS-207ENST00000531990 AFF2P51816 1311 aa28.82■■■□□ 2.2
CCS-207ENST00000531990 SOCS7O14512 581 aa28.81■■■□□ 2.2
CCS-207ENST00000531990 USP19O94966 1318 aa28.8■■■□□ 2.2
CCS-207ENST00000531990 RGS17Q9UGC6 210 aaPredicted RBP28.79■■■□□ 2.2
CCS-207ENST00000531990 C11orf95C9JLR9 678 aaPredicted RBP28.78■■■□□ 2.2
CCS-207ENST00000531990 NME9Q86XW9 330 aa28.75■■■□□ 2.19
CCS-207ENST00000531990 FNBP4Q8N3X1 1017 aaPredicted RBP28.75■■■□□ 2.19
CCS-207ENST00000531990 GCP02774 474 aa28.74■■■□□ 2.19
CCS-207ENST00000531990 PRDM11Q9NQV5 511 aa28.74■■■□□ 2.19
CCS-207ENST00000531990 USP21Q9UK80 565 aa28.74■■■□□ 2.19
CCS-207ENST00000531990 USP31Q70CQ4 1352 aa28.74■■■□□ 2.19
CCS-207ENST00000531990 SLIT3O75094 1523 aa28.74■■■□□ 2.19
CCS-207ENST00000531990 USP54Q70EL1 1684 aa28.74■■■□□ 2.19
CCS-207ENST00000531990 KIF7Q2M1P5 1343 aa28.73■■■□□ 2.19
CCS-207ENST00000531990 COL14A1Q05707 1796 aaKnown RBP28.73■■■□□ 2.19
CCS-207ENST00000531990 PLCH1Q4KWH8 1693 aa28.73■■■□□ 2.19
CCS-207ENST00000531990 ZC3H6P61129 1189 aaKnown RBP28.72■■■□□ 2.19
CCS-207ENST00000531990 KCNH5Q8NCM2 988 aa28.72■■■□□ 2.19
CCS-207ENST00000531990 KIAA0232Q92628 1395 aa28.72■■■□□ 2.19
CCS-207ENST00000531990 NWD2Q9ULI1 1742 aa28.71■■■□□ 2.19
CCS-207ENST00000531990 SLIT2O94813 1529 aa28.7■■■□□ 2.19
CCS-207ENST00000531990 FAM83GA6ND36 823 aa28.7■■■□□ 2.18
CCS-207ENST00000531990 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
CCS-207ENST00000531990 ZRANB1Q9UGI0 708 aa28.69■■■□□ 2.18
CCS-207ENST00000531990 NSD3Q9BZ95 1437 aa28.69■■■□□ 2.18
CCS-207ENST00000531990 CPDO75976 1380 aa28.68■■■□□ 2.18
CCS-207ENST00000531990 KIF20BQ96Q89 1820 aa28.68■■■□□ 2.18
CCS-207ENST00000531990 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.68■■■□□ 2.18
CCS-207ENST00000531990 COG3Q96JB2 828 aa28.67■■■□□ 2.18
CCS-207ENST00000531990 CARD14Q9BXL6 1004 aa28.67■■■□□ 2.18
CCS-207ENST00000531990 QTRT2Q9H974 415 aaKnown RBP28.67■■■□□ 2.18
CCS-207ENST00000531990 BCL9LQ86UU0 1499 aa28.66■■■□□ 2.18
CCS-207ENST00000531990 CCDC7Q96M83 1385 aa28.66■■■□□ 2.18
CCS-207ENST00000531990 SOX12O15370 315 aa28.66■■■□□ 2.18
CCS-207ENST00000531990 UNC5CLQ8IV45 518 aa28.66■■■□□ 2.18
CCS-207ENST00000531990 PANK3Q9H999 370 aa28.66■■■□□ 2.18
CCS-207ENST00000531990 TRPC5Q9UL62 973 aaPredicted RBP28.66■■■□□ 2.18
CCS-207ENST00000531990 CHRNA2Q15822 529 aa28.65■■■□□ 2.18
CCS-207ENST00000531990 OVOS2A0A0J9YW53 1432 aa28.65■■■□□ 2.18
CCS-207ENST00000531990 OVOS2Q6IE36 1432 aa28.65■■■□□ 2.18
CCS-207ENST00000531990 ZBTB7CA1YPR0 619 aa28.64■■■□□ 2.18
CCS-207ENST00000531990 BTG4Q9NY30 223 aa28.64■■■□□ 2.18
CCS-207ENST00000531990 FYB1O15117 783 aa28.63■■■□□ 2.17
CCS-207ENST00000531990 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
CCS-207ENST00000531990 WASHC2AQ641Q2 1341 aa28.62■■■□□ 2.17
CCS-207ENST00000531990 NRAPQ86VF7 1730 aa28.61■■■□□ 2.17
CCS-207ENST00000531990 NFAT5O94916 1531 aa28.61■■■□□ 2.17
CCS-207ENST00000531990 RXRBP28702 533 aa28.61■■■□□ 2.17
CCS-207ENST00000531990 GGNBP2Q9H3C7 697 aa28.61■■■□□ 2.17
CCS-207ENST00000531990 ATRNO75882 1429 aa28.6■■■□□ 2.17
CCS-207ENST00000531990 RBM6P78332 1123 aaKnown RBP28.59■■■□□ 2.17
CCS-207ENST00000531990 ARHGEF25Q86VW2 580 aa28.57■■■□□ 2.16
CCS-207ENST00000531990 CCDC9Q9Y3X0 531 aaKnown RBP28.57■■■□□ 2.16
CCS-207ENST00000531990 AATKQ6ZMQ8 1374 aa28.57■■■□□ 2.16
CCS-207ENST00000531990 LMO7Q8WWI1 1683 aa28.57■■■□□ 2.16
CCS-207ENST00000531990 LTN1O94822 1766 aa28.56■■■□□ 2.16
CCS-207ENST00000531990 KNSTRNQ9Y448 316 aa28.56■■■□□ 2.16
CCS-207ENST00000531990 EVA1CP58658 441 aa28.55■■■□□ 2.16
CCS-207ENST00000531990 VPS72Q15906 364 aa28.55■■■□□ 2.16
CCS-207ENST00000531990 CAMTA1Q9Y6Y1 1673 aa28.54■■■□□ 2.16
CCS-207ENST00000531990 GJD4Q96KN9 370 aaPredicted RBP28.53■■■□□ 2.16
CCS-207ENST00000531990 STRN4Q9NRL3 753 aa28.53■■■□□ 2.16
CCS-207ENST00000531990 COL18A1P39060 1754 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 350.4 ms