RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 VPS72Q15906 364 aa21.66■■□□□ 1.06
SNHG9-201ENST00000531523 HAP1P54257 671 aaPredicted RBP21.65■■□□□ 1.06
SNHG9-201ENST00000531523 CDK19Q9BWU1 502 aa21.65■■□□□ 1.06
SNHG9-201ENST00000531523 NRKQ7Z2Y5 1582 aa21.63■■□□□ 1.05
SNHG9-201ENST00000531523 NGDNQ8NEJ9 315 aaKnown RBP21.63■■□□□ 1.05
SNHG9-201ENST00000531523 L3MBTL2Q969R5 705 aa21.63■■□□□ 1.05
SNHG9-201ENST00000531523 THSD7AQ9UPZ6 1657 aa21.61■■□□□ 1.05
SNHG9-201ENST00000531523 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
SNHG9-201ENST00000531523 ONECUT3O60422 494 aaPredicted RBP21.6■■□□□ 1.05
SNHG9-201ENST00000531523 ACEP12821 1306 aa21.59■■□□□ 1.05
SNHG9-201ENST00000531523 CENPJQ9HC77 1338 aaPredicted RBP21.59■■□□□ 1.05
SNHG9-201ENST00000531523 PLEKHG3A1L390 1219 aa21.59■■□□□ 1.05
SNHG9-201ENST00000531523 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
SNHG9-201ENST00000531523 CCDC61Q9Y6R9 512 aa21.58■■□□□ 1.05
SNHG9-201ENST00000531523 LMO7Q8WWI1 1683 aa21.58■■□□□ 1.05
SNHG9-201ENST00000531523 PAK3O75914 559 aaPredicted RBP21.57■■□□□ 1.04
SNHG9-201ENST00000531523 BTG4Q9NY30 223 aa21.57■■□□□ 1.04
SNHG9-201ENST00000531523 PPIP5K1Q6PFW1 1433 aa21.56■■□□□ 1.04
SNHG9-201ENST00000531523 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
SNHG9-201ENST00000531523 KIAA0232Q92628 1395 aa21.55■■□□□ 1.04
SNHG9-201ENST00000531523 BLMP54132 1417 aaPredicted RBP21.55■■□□□ 1.04
SNHG9-201ENST00000531523 AKAP12Q02952 1782 aa21.53■■□□□ 1.04
SNHG9-201ENST00000531523 USP19O94966 1318 aa21.53■■□□□ 1.04
SNHG9-201ENST00000531523 CCDC125Q86Z20 511 aa21.52■■□□□ 1.04
SNHG9-201ENST00000531523 CABP2Q9NPB3 220 aa21.52■■□□□ 1.04
SNHG9-201ENST00000531523 CCDC9Q9Y3X0 531 aaKnown RBP21.52■■□□□ 1.04
SNHG9-201ENST00000531523 PIK3C2AO00443 1686 aa21.52■■□□□ 1.04
SNHG9-201ENST00000531523 SPATA31A5Q5VU36 1347 aa21.52■■□□□ 1.03
SNHG9-201ENST00000531523 SPATA31A7Q8IWB4 1347 aa21.52■■□□□ 1.03
SNHG9-201ENST00000531523 USP6P35125 1406 aa21.5■■□□□ 1.03
SNHG9-201ENST00000531523 SSH2Q76I76 1423 aa21.5■■□□□ 1.03
SNHG9-201ENST00000531523 SRPK2P78362 688 aaKnown RBP21.5■■□□□ 1.03
SNHG9-201ENST00000531523 NUTM2GQ5VZR2 741 aa21.5■■□□□ 1.03
SNHG9-201ENST00000531523 PRDM11Q9NQV5 511 aa21.5■■□□□ 1.03
SNHG9-201ENST00000531523 CAMTA1Q9Y6Y1 1673 aa21.5■■□□□ 1.03
SNHG9-201ENST00000531523 FAM98CQ17RN3 349 aaKnown RBP21.49■■□□□ 1.03
SNHG9-201ENST00000531523 SLIT3O75094 1523 aa21.49■■□□□ 1.03
SNHG9-201ENST00000531523 TNS1Q9HBL0 1735 aaKnown RBP21.49■■□□□ 1.03
SNHG9-201ENST00000531523 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
SNHG9-201ENST00000531523 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
SNHG9-201ENST00000531523 CHRNA2Q15822 529 aa21.48■■□□□ 1.03
SNHG9-201ENST00000531523 KRT27Q7Z3Y8 459 aa21.48■■□□□ 1.03
SNHG9-201ENST00000531523 CPDO75976 1380 aa21.48■■□□□ 1.03
SNHG9-201ENST00000531523 RGPD1P0DJD0 1748 aa21.47■■□□□ 1.03
SNHG9-201ENST00000531523 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
SNHG9-201ENST00000531523 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
SNHG9-201ENST00000531523 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
SNHG9-201ENST00000531523 COL18A1P39060 1754 aa21.45■■□□□ 1.02
SNHG9-201ENST00000531523 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
SNHG9-201ENST00000531523 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
SNHG9-201ENST00000531523 DEFB132Q7Z7B7 95 aa21.43■■□□□ 1.02
SNHG9-201ENST00000531523 CABP1Q9NZU7 370 aa21.43■■□□□ 1.02
SNHG9-201ENST00000531523 EVC2Q86UK5 1308 aa21.42■■□□□ 1.02
SNHG9-201ENST00000531523 COL5A2P05997 1499 aaPredicted RBP21.41■■□□□ 1.02
SNHG9-201ENST00000531523 SBNO2Q9Y2G9 1366 aa21.41■■□□□ 1.02
SNHG9-201ENST00000531523 WNK3Q9BYP7 1800 aa21.4■■□□□ 1.02
SNHG9-201ENST00000531523 PARP4Q9UKK3 1724 aaKnown RBP21.4■■□□□ 1.02
SNHG9-201ENST00000531523 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
SNHG9-201ENST00000531523 CPSF1Q10570 1443 aaKnown RBP21.39■■□□□ 1.02
SNHG9-201ENST00000531523 A0A0G2JS52 829 aa21.39■■□□□ 1.01
SNHG9-201ENST00000531523 GCP02774 474 aa21.39■■□□□ 1.01
SNHG9-201ENST00000531523 MYT1Q01538 1121 aa21.39■■□□□ 1.01
SNHG9-201ENST00000531523 STRN4Q9NRL3 753 aa21.39■■□□□ 1.01
SNHG9-201ENST00000531523 NLRP13Q86W25 1043 aa21.38■■□□□ 1.01
SNHG9-201ENST00000531523 FAM182BQ5T319 152 aa21.37■■□□□ 1.01
SNHG9-201ENST00000531523 ZRANB1Q9UGI0 708 aa21.37■■□□□ 1.01
SNHG9-201ENST00000531523 RGPD5Q99666 1765 aa21.37■■□□□ 1.01
SNHG9-201ENST00000531523 SRCAPQ6ZRS2 3230 aa21.36■■□□□ 1.01
SNHG9-201ENST00000531523 LARP1Q6PKG0 1096 aaKnown RBP21.36■■□□□ 1.01
SNHG9-201ENST00000531523 CD163L1Q9NR16 1453 aa21.36■■□□□ 1.01
SNHG9-201ENST00000531523 DISP2A7MBM2 1401 aa21.36■■□□□ 1.01
SNHG9-201ENST00000531523 NFAT5O94916 1531 aa21.35■■□□□ 1.01
SNHG9-201ENST00000531523 LRRC37A3O60309 1634 aa21.34■■□□□ 1.01
SNHG9-201ENST00000531523 BARGINQ6ZT62 677 aa21.34■■□□□ 1.01
SNHG9-201ENST00000531523 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
SNHG9-201ENST00000531523 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1
SNHG9-201ENST00000531523 TTC21BQ7Z4L5 1316 aa21.32■■□□□ 1
SNHG9-201ENST00000531523 NLRP6P59044 892 aa21.32■■□□□ 1
SNHG9-201ENST00000531523 SF3B2Q13435 895 aaKnown RBP21.32■■□□□ 1
SNHG9-201ENST00000531523 RREB1Q92766 1687 aa21.31■■□□□ 1
SNHG9-201ENST00000531523 TONSLQ96HA7 1378 aa21.31■■□□□ 1
SNHG9-201ENST00000531523 CRB1P82279 1406 aa21.3■■□□□ 1
SNHG9-201ENST00000531523 LRP5O75197 1615 aa21.3■■□□□ 1
SNHG9-201ENST00000531523 CARD11Q9BXL7 1154 aa21.3■■□□□ 1
SNHG9-201ENST00000531523 USP35Q9P2H5 1018 aa21.3■■□□□ 1
SNHG9-201ENST00000531523 EVA1CP58658 441 aa21.29■■□□□ 1
SNHG9-201ENST00000531523 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
SNHG9-201ENST00000531523 TTC21AQ8NDW8 1320 aa21.29■■□□□ 1
SNHG9-201ENST00000531523 BAG6P46379 1132 aa21.28■■□□□ 1
SNHG9-201ENST00000531523 ZNF692Q9BU19 519 aaPredicted RBP21.28■■□□□ 1
SNHG9-201ENST00000531523 ABCC6O95255 1503 aa21.28■■□□□ 1
SNHG9-201ENST00000531523 SBF2Q86WG5 1849 aa21.27■■□□□ 1
SNHG9-201ENST00000531523 KTN1Q86UP2 1357 aaKnown RBP21.27■■□□□ 1
SNHG9-201ENST00000531523 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
SNHG9-201ENST00000531523 LTN1O94822 1766 aa21.26■□□□□ 0.99
SNHG9-201ENST00000531523 EN1Q05925 392 aaPredicted RBP21.26■□□□□ 0.99
SNHG9-201ENST00000531523 AXIN2Q9Y2T1 843 aa21.26■□□□□ 0.99
SNHG9-201ENST00000531523 THRAP3Q9Y2W1 955 aaKnown RBP21.26■□□□□ 0.99
SNHG9-201ENST00000531523 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
SNHG9-201ENST00000531523 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms