RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 NGDNQ8NEJ9 315 aaKnown RBP26.96■■□□□ 1.91
SSSCA1-206ENST00000531405 BTG4Q9NY30 223 aa26.96■■□□□ 1.91
SSSCA1-206ENST00000531405 STAC3Q96MF2 364 aa26.95■■□□□ 1.9
SSSCA1-206ENST00000531405 TOPAZ1Q8N9V7 1692 aa26.95■■□□□ 1.9
SSSCA1-206ENST00000531405 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
SSSCA1-206ENST00000531405 KIAA1210Q9ULL0 1709 aa26.94■■□□□ 1.9
SSSCA1-206ENST00000531405 PAK3O75914 559 aaPredicted RBP26.94■■□□□ 1.9
SSSCA1-206ENST00000531405 KRT27Q7Z3Y8 459 aa26.94■■□□□ 1.9
SSSCA1-206ENST00000531405 A0A0G2JS52 829 aa26.93■■□□□ 1.9
SSSCA1-206ENST00000531405 HRCP23327 699 aa26.93■■□□□ 1.9
SSSCA1-206ENST00000531405 MYT1Q01538 1121 aa26.93■■□□□ 1.9
SSSCA1-206ENST00000531405 FAM98CQ17RN3 349 aaKnown RBP26.91■■□□□ 1.9
SSSCA1-206ENST00000531405 SF3B2Q13435 895 aaKnown RBP26.9■■□□□ 1.9
SSSCA1-206ENST00000531405 NUDT16Q96DE0 195 aaKnown RBP26.9■■□□□ 1.9
SSSCA1-206ENST00000531405 THSD7AQ9UPZ6 1657 aa26.87■■□□□ 1.89
SSSCA1-206ENST00000531405 RGPD1P0DJD0 1748 aa26.86■■□□□ 1.89
SSSCA1-206ENST00000531405 CDK19Q9BWU1 502 aa26.86■■□□□ 1.89
SSSCA1-206ENST00000531405 PRDM11Q9NQV5 511 aa26.85■■□□□ 1.89
SSSCA1-206ENST00000531405 SPATA31A5Q5VU36 1347 aa26.84■■□□□ 1.89
SSSCA1-206ENST00000531405 SPATA31A7Q8IWB4 1347 aa26.84■■□□□ 1.89
SSSCA1-206ENST00000531405 KIAA0232Q92628 1395 aa26.83■■□□□ 1.88
SSSCA1-206ENST00000531405 FAM182BQ5T319 152 aa26.82■■□□□ 1.88
SSSCA1-206ENST00000531405 NUTM2GQ5VZR2 741 aa26.82■■□□□ 1.88
SSSCA1-206ENST00000531405 TNS1Q9HBL0 1735 aaKnown RBP26.82■■□□□ 1.88
SSSCA1-206ENST00000531405 CHRNA2Q15822 529 aa26.81■■□□□ 1.88
SSSCA1-206ENST00000531405 NBPF1Q3BBV0 1214 aa26.8■■□□□ 1.88
SSSCA1-206ENST00000531405 POLR3AO14802 1390 aaPredicted RBP26.8■■□□□ 1.88
SSSCA1-206ENST00000531405 ACEP12821 1306 aa26.79■■□□□ 1.88
SSSCA1-206ENST00000531405 NRKQ7Z2Y5 1582 aa26.79■■□□□ 1.88
SSSCA1-206ENST00000531405 QRICH2Q9H0J4 1663 aa26.79■■□□□ 1.88
SSSCA1-206ENST00000531405 ZC3H6P61129 1189 aaKnown RBP26.77■■□□□ 1.88
SSSCA1-206ENST00000531405 BAG6P46379 1132 aa26.76■■□□□ 1.87
SSSCA1-206ENST00000531405 NBPF8Q3BBV2 869 aa26.76■■□□□ 1.87
SSSCA1-206ENST00000531405 STRN4Q9NRL3 753 aa26.76■■□□□ 1.87
SSSCA1-206ENST00000531405 CCDC61Q9Y6R9 512 aa26.75■■□□□ 1.87
SSSCA1-206ENST00000531405 LRP5O75197 1615 aa26.75■■□□□ 1.87
SSSCA1-206ENST00000531405 SPATA31A1Q5TZJ5 1347 aa26.74■■□□□ 1.87
SSSCA1-206ENST00000531405 PLEKHG3A1L390 1219 aa26.73■■□□□ 1.87
SSSCA1-206ENST00000531405 PSDA5PKW4 1024 aaPredicted RBP26.72■■□□□ 1.87
SSSCA1-206ENST00000531405 LMO7Q8WWI1 1683 aa26.72■■□□□ 1.87
SSSCA1-206ENST00000531405 EN1Q05925 392 aaPredicted RBP26.71■■□□□ 1.87
SSSCA1-206ENST00000531405 PPIP5K1Q6PFW1 1433 aa26.71■■□□□ 1.87
SSSCA1-206ENST00000531405 CAMTA1Q9Y6Y1 1673 aa26.7■■□□□ 1.87
SSSCA1-206ENST00000531405 ABTB2Q8N961 1025 aa26.7■■□□□ 1.86
SSSCA1-206ENST00000531405 SRPK2P78362 688 aaKnown RBP26.69■■□□□ 1.86
SSSCA1-206ENST00000531405 USP35Q9P2H5 1018 aa26.69■■□□□ 1.86
SSSCA1-206ENST00000531405 CENPJQ9HC77 1338 aaPredicted RBP26.68■■□□□ 1.86
SSSCA1-206ENST00000531405 SSH2Q76I76 1423 aa26.68■■□□□ 1.86
SSSCA1-206ENST00000531405 CABP2Q9NPB3 220 aa26.67■■□□□ 1.86
SSSCA1-206ENST00000531405 USP19O94966 1318 aa26.65■■□□□ 1.86
SSSCA1-206ENST00000531405 EVA1CP58658 441 aa26.65■■□□□ 1.86
SSSCA1-206ENST00000531405 TRPM1Q7Z4N2 1603 aa26.65■■□□□ 1.86
SSSCA1-206ENST00000531405 DISP2A7MBM2 1401 aa26.65■■□□□ 1.86
SSSCA1-206ENST00000531405 CPDO75976 1380 aa26.63■■□□□ 1.85
SSSCA1-206ENST00000531405 LARP1Q6PKG0 1096 aaKnown RBP26.63■■□□□ 1.85
SSSCA1-206ENST00000531405 TRIM37O94972 964 aa26.62■■□□□ 1.85
SSSCA1-206ENST00000531405 PARP4Q9UKK3 1724 aaKnown RBP26.6■■□□□ 1.85
SSSCA1-206ENST00000531405 EZH2Q15910 746 aaKnown RBP26.6■■□□□ 1.85
SSSCA1-206ENST00000531405 NLRP13Q86W25 1043 aa26.6■■□□□ 1.85
SSSCA1-206ENST00000531405 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
SSSCA1-206ENST00000531405 GCP02774 474 aa26.59■■□□□ 1.85
SSSCA1-206ENST00000531405 FAM196AQ6ZSG2 479 aa26.59■■□□□ 1.85
SSSCA1-206ENST00000531405 BARGINQ6ZT62 677 aa26.59■■□□□ 1.85
SSSCA1-206ENST00000531405 L3MBTL2Q969R5 705 aa26.59■■□□□ 1.85
SSSCA1-206ENST00000531405 RREB1Q92766 1687 aa26.59■■□□□ 1.85
SSSCA1-206ENST00000531405 USP6P35125 1406 aa26.57■■□□□ 1.84
SSSCA1-206ENST00000531405 COL5A2P05997 1499 aaPredicted RBP26.57■■□□□ 1.84
SSSCA1-206ENST00000531405 AKAP12Q02952 1782 aa26.57■■□□□ 1.84
SSSCA1-206ENST00000531405 R3HDM1Q15032 1099 aaKnown RBP26.57■■□□□ 1.84
SSSCA1-206ENST00000531405 CABP1Q9NZU7 370 aa26.57■■□□□ 1.84
SSSCA1-206ENST00000531405 NUP188Q5SRE5 1749 aa26.56■■□□□ 1.84
SSSCA1-206ENST00000531405 RGPD5Q99666 1765 aa26.56■■□□□ 1.84
SSSCA1-206ENST00000531405 TCP11L2Q8N4U5 519 aa26.56■■□□□ 1.84
SSSCA1-206ENST00000531405 SLIT3O75094 1523 aa26.55■■□□□ 1.84
SSSCA1-206ENST00000531405 ZBTB7CA1YPR0 619 aa26.55■■□□□ 1.84
SSSCA1-206ENST00000531405 PDE3BQ13370 1112 aa26.55■■□□□ 1.84
SSSCA1-206ENST00000531405 CAMKK2Q96RR4 588 aa26.55■■□□□ 1.84
SSSCA1-206ENST00000531405 SIN3AQ96ST3 1273 aa26.55■■□□□ 1.84
SSSCA1-206ENST00000531405 COL18A1P39060 1754 aa26.55■■□□□ 1.84
SSSCA1-206ENST00000531405 WNK3Q9BYP7 1800 aa26.54■■□□□ 1.84
SSSCA1-206ENST00000531405 BRD4O60885 1362 aaPredicted RBP26.54■■□□□ 1.84
SSSCA1-206ENST00000531405 APBA3O96018 575 aa26.53■■□□□ 1.84
SSSCA1-206ENST00000531405 SBF2Q86WG5 1849 aa26.53■■□□□ 1.84
SSSCA1-206ENST00000531405 NLRP6P59044 892 aa26.52■■□□□ 1.84
SSSCA1-206ENST00000531405 LRRC37A3O60309 1634 aa26.5■■□□□ 1.83
SSSCA1-206ENST00000531405 PEAK1Q9H792 1746 aa26.5■■□□□ 1.83
SSSCA1-206ENST00000531405 CRB1P82279 1406 aa26.49■■□□□ 1.83
SSSCA1-206ENST00000531405 EVC2Q86UK5 1308 aa26.49■■□□□ 1.83
SSSCA1-206ENST00000531405 THRAP3Q9Y2W1 955 aaKnown RBP26.49■■□□□ 1.83
SSSCA1-206ENST00000531405 NEUROD1Q13562 356 aa26.48■■□□□ 1.83
SSSCA1-206ENST00000531405 ROCK2O75116 1388 aaKnown RBP26.47■■□□□ 1.83
SSSCA1-206ENST00000531405 AATKQ6ZMQ8 1374 aa26.46■■□□□ 1.83
SSSCA1-206ENST00000531405 PARD3Q8TEW0 1356 aa26.46■■□□□ 1.83
SSSCA1-206ENST00000531405 MON2Q7Z3U7 1717 aa26.43■■□□□ 1.82
SSSCA1-206ENST00000531405 CPSF1Q10570 1443 aaKnown RBP26.41■■□□□ 1.82
SSSCA1-206ENST00000531405 AXIN2Q9Y2T1 843 aa26.41■■□□□ 1.82
SSSCA1-206ENST00000531405 TTC21BQ7Z4L5 1316 aa26.4■■□□□ 1.82
SSSCA1-206ENST00000531405 SOX12O15370 315 aa26.4■■□□□ 1.82
SSSCA1-206ENST00000531405 TOM1L2Q6ZVM7 507 aa26.4■■□□□ 1.82
SSSCA1-206ENST00000531405 RGPD3A6NKT7 1758 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms