RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
CTSB-220ENST00000531089 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
CTSB-220ENST00000531089 BRWD3Q6RI45 1802 aa22.33■■□□□ 1.17
CTSB-220ENST00000531089 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
CTSB-220ENST00000531089 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
CTSB-220ENST00000531089 CCDC125Q86Z20 511 aa22.32■■□□□ 1.16
CTSB-220ENST00000531089 BTG4Q9NY30 223 aa22.32■■□□□ 1.16
CTSB-220ENST00000531089 ITSN1Q15811 1721 aa22.32■■□□□ 1.16
CTSB-220ENST00000531089 ACEP12821 1306 aa22.32■■□□□ 1.16
CTSB-220ENST00000531089 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
CTSB-220ENST00000531089 POLR3AO14802 1390 aaPredicted RBP22.3■■□□□ 1.16
CTSB-220ENST00000531089 CRYBG1Q9Y4K1 1723 aa22.29■■□□□ 1.16
CTSB-220ENST00000531089 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
CTSB-220ENST00000531089 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
CTSB-220ENST00000531089 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
CTSB-220ENST00000531089 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
CTSB-220ENST00000531089 COL14A1Q05707 1796 aaKnown RBP22.26■■□□□ 1.15
CTSB-220ENST00000531089 NRAPQ86VF7 1730 aa22.25■■□□□ 1.15
CTSB-220ENST00000531089 SRPK2P78362 688 aaKnown RBP22.24■■□□□ 1.15
CTSB-220ENST00000531089 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
CTSB-220ENST00000531089 PRDM11Q9NQV5 511 aa22.23■■□□□ 1.15
CTSB-220ENST00000531089 SRCAPQ6ZRS2 3230 aa22.23■■□□□ 1.15
CTSB-220ENST00000531089 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
CTSB-220ENST00000531089 FAM98CQ17RN3 349 aaKnown RBP22.23■■□□□ 1.15
CTSB-220ENST00000531089 SPATA31A5Q5VU36 1347 aa22.22■■□□□ 1.15
CTSB-220ENST00000531089 SPATA31A7Q8IWB4 1347 aa22.22■■□□□ 1.15
CTSB-220ENST00000531089 CHRNA2Q15822 529 aa22.22■■□□□ 1.15
CTSB-220ENST00000531089 ABTB2Q8N961 1025 aa22.22■■□□□ 1.15
CTSB-220ENST00000531089 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
CTSB-220ENST00000531089 CABP1Q9NZU7 370 aa22.21■■□□□ 1.15
CTSB-220ENST00000531089 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
CTSB-220ENST00000531089 PPIP5K1Q6PFW1 1433 aa22.19■■□□□ 1.14
CTSB-220ENST00000531089 TRPM1Q7Z4N2 1603 aa22.19■■□□□ 1.14
CTSB-220ENST00000531089 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
CTSB-220ENST00000531089 QRICH2Q9H0J4 1663 aa22.18■■□□□ 1.14
CTSB-220ENST00000531089 DEFB132Q7Z7B7 95 aa22.17■■□□□ 1.14
CTSB-220ENST00000531089 PHRF1Q9P1Y6 1649 aaKnown RBP22.17■■□□□ 1.14
CTSB-220ENST00000531089 ZRANB1Q9UGI0 708 aa22.16■■□□□ 1.14
CTSB-220ENST00000531089 A0A0G2JS52 829 aa22.15■■□□□ 1.14
CTSB-220ENST00000531089 MYT1Q01538 1121 aa22.15■■□□□ 1.14
CTSB-220ENST00000531089 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
CTSB-220ENST00000531089 SPATA31A1Q5TZJ5 1347 aa22.15■■□□□ 1.14
CTSB-220ENST00000531089 GCP02774 474 aa22.14■■□□□ 1.14
CTSB-220ENST00000531089 USP19O94966 1318 aa22.14■■□□□ 1.14
CTSB-220ENST00000531089 EVC2Q86UK5 1308 aa22.14■■□□□ 1.14
CTSB-220ENST00000531089 STRN4Q9NRL3 753 aa22.14■■□□□ 1.13
CTSB-220ENST00000531089 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.13
CTSB-220ENST00000531089 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
CTSB-220ENST00000531089 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
CTSB-220ENST00000531089 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
CTSB-220ENST00000531089 EVA1CP58658 441 aa22.11■■□□□ 1.13
CTSB-220ENST00000531089 SF3B2Q13435 895 aaKnown RBP22.11■■□□□ 1.13
CTSB-220ENST00000531089 CAMTA1Q9Y6Y1 1673 aa22.11■■□□□ 1.13
CTSB-220ENST00000531089 CPDO75976 1380 aa22.1■■□□□ 1.13
CTSB-220ENST00000531089 USP6P35125 1406 aa22.1■■□□□ 1.13
CTSB-220ENST00000531089 SSH2Q76I76 1423 aa22.1■■□□□ 1.13
CTSB-220ENST00000531089 NLRP6P59044 892 aa22.09■■□□□ 1.13
CTSB-220ENST00000531089 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
CTSB-220ENST00000531089 ZNF692Q9BU19 519 aaPredicted RBP22.08■■□□□ 1.13
CTSB-220ENST00000531089 THSD7AQ9UPZ6 1657 aa22.08■■□□□ 1.13
CTSB-220ENST00000531089 NRKQ7Z2Y5 1582 aa22.08■■□□□ 1.12
CTSB-220ENST00000531089 USP35Q9P2H5 1018 aa22.07■■□□□ 1.12
CTSB-220ENST00000531089 BARGINQ6ZT62 677 aa22.06■■□□□ 1.12
CTSB-220ENST00000531089 LMO7Q8WWI1 1683 aa22.05■■□□□ 1.12
CTSB-220ENST00000531089 TTC21BQ7Z4L5 1316 aa22.03■■□□□ 1.12
CTSB-220ENST00000531089 BAG6P46379 1132 aa22.03■■□□□ 1.12
CTSB-220ENST00000531089 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
CTSB-220ENST00000531089 TCP11L2Q8N4U5 519 aa22.02■■□□□ 1.12
CTSB-220ENST00000531089 EN1Q05925 392 aaPredicted RBP22.01■■□□□ 1.11
CTSB-220ENST00000531089 FAM196AQ6ZSG2 479 aa22.01■■□□□ 1.11
CTSB-220ENST00000531089 CPSF1Q10570 1443 aaKnown RBP22.01■■□□□ 1.11
CTSB-220ENST00000531089 THRAP3Q9Y2W1 955 aaKnown RBP22■■□□□ 1.11
CTSB-220ENST00000531089 AKAP12Q02952 1782 aa22■■□□□ 1.11
CTSB-220ENST00000531089 SLIT3O75094 1523 aa21.99■■□□□ 1.11
CTSB-220ENST00000531089 AXIN2Q9Y2T1 843 aa21.99■■□□□ 1.11
CTSB-220ENST00000531089 PIK3C2AO00443 1686 aa21.99■■□□□ 1.11
CTSB-220ENST00000531089 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
CTSB-220ENST00000531089 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
CTSB-220ENST00000531089 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
CTSB-220ENST00000531089 COL18A1P39060 1754 aa21.98■■□□□ 1.11
CTSB-220ENST00000531089 ZBTB7CA1YPR0 619 aa21.97■■□□□ 1.11
CTSB-220ENST00000531089 PDE3BQ13370 1112 aa21.97■■□□□ 1.11
CTSB-220ENST00000531089 ARHGEF25Q86VW2 580 aa21.97■■□□□ 1.11
CTSB-220ENST00000531089 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
CTSB-220ENST00000531089 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
CTSB-220ENST00000531089 TRIM37O94972 964 aa21.97■■□□□ 1.11
CTSB-220ENST00000531089 TTC21AQ8NDW8 1320 aa21.96■■□□□ 1.11
CTSB-220ENST00000531089 KTN1Q86UP2 1357 aaKnown RBP21.95■■□□□ 1.1
CTSB-220ENST00000531089 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
CTSB-220ENST00000531089 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
CTSB-220ENST00000531089 SLC12A5Q9H2X9 1139 aa21.94■■□□□ 1.1
CTSB-220ENST00000531089 CRB1P82279 1406 aa21.94■■□□□ 1.1
CTSB-220ENST00000531089 EZH2Q15910 746 aaKnown RBP21.93■■□□□ 1.1
CTSB-220ENST00000531089 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
CTSB-220ENST00000531089 RGPD5Q99666 1765 aa21.93■■□□□ 1.1
CTSB-220ENST00000531089 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
CTSB-220ENST00000531089 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
CTSB-220ENST00000531089 DISP2A7MBM2 1401 aa21.92■■□□□ 1.1
CTSB-220ENST00000531089 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
CTSB-220ENST00000531089 PSDA5PKW4 1024 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms