RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-219ENST00000531050 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 PWP2Q15269 919 aaKnown RBP9.57□□□□□ -0.88
PTPRK-219ENST00000531050 AXDND1Q5T1B0 1012 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-219ENST00000531050 CHMP7Q8WUX9 453 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-219ENST00000531050 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 LMBRD1Q9NUN5 540 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 NPC1L1Q9UHC9 1359 aa9.57□□□□□ -0.88
PTPRK-219ENST00000531050 RIOK3O14730 519 aaKnown RBP9.56□□□□□ -0.88
PTPRK-219ENST00000531050 PTMAP06454 111 aaKnown RBP9.56□□□□□ -0.88
PTPRK-219ENST00000531050 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.88
PTPRK-219ENST00000531050 COG6Q9Y2V7 657 aa9.56□□□□□ -0.88
PTPRK-219ENST00000531050 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
PTPRK-219ENST00000531050 MORC2Q9Y6X9 1032 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-219ENST00000531050 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
PTPRK-219ENST00000531050 PER1O15534 1290 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-219ENST00000531050 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
PTPRK-219ENST00000531050 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
PTPRK-219ENST00000531050 PPP6R1Q9UPN7 881 aa9.56□□□□□ -0.88
PTPRK-219ENST00000531050 LRSAM1Q6UWE0 723 aa9.55□□□□□ -0.88
PTPRK-219ENST00000531050 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTPRK-219ENST00000531050 PMFBP1Q8TBY8 1022 aa9.55□□□□□ -0.88
PTPRK-219ENST00000531050 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
PTPRK-219ENST00000531050 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
PTPRK-219ENST00000531050 NCBP1Q09161 790 aaKnown RBP9.55□□□□□ -0.88
PTPRK-219ENST00000531050 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
PTPRK-219ENST00000531050 SPINK5Q9NQ38 1064 aaPredicted RBP9.55□□□□□ -0.88
PTPRK-219ENST00000531050 ERICH4A6NGS2 130 aa9.54□□□□□ -0.88
PTPRK-219ENST00000531050 NOP2P46087 812 aaKnown RBP9.54□□□□□ -0.88
PTPRK-219ENST00000531050 MCTP1Q6DN14 999 aa9.54□□□□□ -0.88
PTPRK-219ENST00000531050 GPT2Q8TD30 523 aa9.54□□□□□ -0.88
PTPRK-219ENST00000531050 NKTRP30414 1462 aaKnown RBP9.54□□□□□ -0.88
PTPRK-219ENST00000531050 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-219ENST00000531050 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
PTPRK-219ENST00000531050 KIF2CQ99661 725 aa9.53□□□□□ -0.88
PTPRK-219ENST00000531050 ABCC10Q5T3U5 1492 aa9.53□□□□□ -0.88
PTPRK-219ENST00000531050 FAM193AP78312 1265 aa9.53□□□□□ -0.88
PTPRK-219ENST00000531050 MPNDQ8N594 471 aa9.53□□□□□ -0.88
PTPRK-219ENST00000531050 RNF214Q8ND24 703 aa9.53□□□□□ -0.88
PTPRK-219ENST00000531050 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
PTPRK-219ENST00000531050 RALGAPBQ86X10 1494 aa9.52□□□□□ -0.88
PTPRK-219ENST00000531050 ST20-MTHFSA0A0A6YYL1 179 aa9.52□□□□□ -0.88
PTPRK-219ENST00000531050 SYCE3A1L190 88 aa9.52□□□□□ -0.88
PTPRK-219ENST00000531050 JPH4Q96JJ6 628 aa9.52□□□□□ -0.88
PTPRK-219ENST00000531050 DIAPH3Q9NSV4 1193 aa9.52□□□□□ -0.88
PTPRK-219ENST00000531050 CLASP1Q7Z460 1538 aa9.52□□□□□ -0.89
PTPRK-219ENST00000531050 SHANK2Q9UPX8 1470 aa9.52□□□□□ -0.89
PTPRK-219ENST00000531050 FBLN2P98095 1184 aa9.52□□□□□ -0.89
PTPRK-219ENST00000531050 KIF18AQ8NI77 898 aa9.52□□□□□ -0.89
PTPRK-219ENST00000531050 TTC12Q9H892 705 aaPredicted RBP9.52□□□□□ -0.89
PTPRK-219ENST00000531050 TMEM63CQ9P1W3 806 aa9.52□□□□□ -0.89
PTPRK-219ENST00000531050 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
PTPRK-219ENST00000531050 HNRNPH2P55795 449 aaKnown RBP9.51□□□□□ -0.89
PTPRK-219ENST00000531050 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 EP400NLQ6ZTU2 488 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 RSPH14Q9UHP6 348 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 ATP10BO94823 1461 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 SYCP1Q15431 976 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
PTPRK-219ENST00000531050 ANKRD30AQ9BXX3 1397 aa9.51□□□□□ -0.89
PTPRK-219ENST00000531050 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
PTPRK-219ENST00000531050 KRT222Q8N1A0 295 aa9.5□□□□□ -0.89
PTPRK-219ENST00000531050 CARD11Q9BXL7 1154 aa9.5□□□□□ -0.89
PTPRK-219ENST00000531050 FAM53CQ9NYF3 392 aa9.5□□□□□ -0.89
PTPRK-219ENST00000531050 UHRF1BP1Q6BDS2 1440 aa9.5□□□□□ -0.89
PTPRK-219ENST00000531050 DHX16O60231 1041 aaKnown RBP9.5□□□□□ -0.89
PTPRK-219ENST00000531050 CARD10Q9BWT7 1032 aa9.5□□□□□ -0.89
PTPRK-219ENST00000531050 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
PTPRK-219ENST00000531050 TNNT3P45378 269 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 KDM5DQ9BY66 1539 aa9.49□□□□□ -0.89
PTPRK-219ENST00000531050 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 CYP2C19P33261 490 aa9.49□□□□□ -0.89
PTPRK-219ENST00000531050 GTF2A1P52655 376 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 CT47A1Q5JQC4 288 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 MYCBPQ99417 103 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 RWDD1Q9H446 243 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
PTPRK-219ENST00000531050 C9orf84Q5VXU9 1444 aa9.49□□□□□ -0.89
PTPRK-219ENST00000531050 ANKRD50Q9ULJ7 1429 aa9.49□□□□□ -0.89
PTPRK-219ENST00000531050 ARHGEF5Q12774 1597 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
PTPRK-219ENST00000531050 CHAF1AQ13111 956 aaPredicted RBP9.48□□□□□ -0.89
PTPRK-219ENST00000531050 CREBRFQ8IUR6 639 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 NCAPGQ9BPX3 1015 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 LMOD3Q0VAK6 560 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 TMX1Q9H3N1 280 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 SHROOM2Q13796 1616 aa9.48□□□□□ -0.89
PTPRK-219ENST00000531050 RLBP1P12271 317 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 BANK1Q8NDB2 785 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 PREX2Q70Z35 1606 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 PLEKHD1A6NEE1 506 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 PATL2C9JE40 543 aaKnown RBP9.47□□□□□ -0.89
PTPRK-219ENST00000531050 PKP1Q13835 747 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 NAA30Q147X3 362 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-219ENST00000531050 ICE2Q659A1 982 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms