RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 QTRT2Q9H974 415 aaKnown RBP18.32■□□□□ 0.52
LINC01016-204ENST00000531046 USP21Q9UK80 565 aa18.32■□□□□ 0.52
LINC01016-204ENST00000531046 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
LINC01016-204ENST00000531046 ABCA3Q99758 1704 aa18.3■□□□□ 0.52
LINC01016-204ENST00000531046 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
LINC01016-204ENST00000531046 RXRBP28702 533 aa18.29■□□□□ 0.52
LINC01016-204ENST00000531046 USP47Q96K76 1375 aa18.29■□□□□ 0.52
LINC01016-204ENST00000531046 TESK2Q96S53 571 aa18.28■□□□□ 0.52
LINC01016-204ENST00000531046 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
LINC01016-204ENST00000531046 ABTB2Q8N961 1025 aa18.27■□□□□ 0.52
LINC01016-204ENST00000531046 USP6P35125 1406 aa18.26■□□□□ 0.51
LINC01016-204ENST00000531046 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
LINC01016-204ENST00000531046 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
LINC01016-204ENST00000531046 TRPC5Q9UL62 973 aaPredicted RBP18.25■□□□□ 0.51
LINC01016-204ENST00000531046 BCL9LQ86UU0 1499 aa18.25■□□□□ 0.51
LINC01016-204ENST00000531046 CRYBG1Q9Y4K1 1723 aa18.24■□□□□ 0.51
LINC01016-204ENST00000531046 RBM6P78332 1123 aaKnown RBP18.24■□□□□ 0.51
LINC01016-204ENST00000531046 SLIT2O94813 1529 aa18.23■□□□□ 0.51
LINC01016-204ENST00000531046 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
LINC01016-204ENST00000531046 ATRNO75882 1429 aa18.23■□□□□ 0.51
LINC01016-204ENST00000531046 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
LINC01016-204ENST00000531046 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
LINC01016-204ENST00000531046 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
LINC01016-204ENST00000531046 PHRF1Q9P1Y6 1649 aaKnown RBP18.21■□□□□ 0.51
LINC01016-204ENST00000531046 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
LINC01016-204ENST00000531046 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
LINC01016-204ENST00000531046 AKAP12Q02952 1782 aa18.21■□□□□ 0.51
LINC01016-204ENST00000531046 PLCH1Q4KWH8 1693 aa18.21■□□□□ 0.51
LINC01016-204ENST00000531046 BRD4O60885 1362 aaPredicted RBP18.2■□□□□ 0.5
LINC01016-204ENST00000531046 NLRP6P59044 892 aa18.2■□□□□ 0.5
LINC01016-204ENST00000531046 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
LINC01016-204ENST00000531046 CPSF1Q10570 1443 aaKnown RBP18.2■□□□□ 0.5
LINC01016-204ENST00000531046 SSH2Q76I76 1423 aa18.2■□□□□ 0.5
LINC01016-204ENST00000531046 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
LINC01016-204ENST00000531046 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
LINC01016-204ENST00000531046 CHRNA2Q15822 529 aa18.19■□□□□ 0.5
LINC01016-204ENST00000531046 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
LINC01016-204ENST00000531046 RGS12O14924 1447 aa18.18■□□□□ 0.5
LINC01016-204ENST00000531046 SLC24A1O60721 1099 aa18.18■□□□□ 0.5
LINC01016-204ENST00000531046 TMF1P82094 1093 aa18.18■□□□□ 0.5
LINC01016-204ENST00000531046 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
LINC01016-204ENST00000531046 PUS7Q96PZ0 661 aaKnown RBP18.18■□□□□ 0.5
LINC01016-204ENST00000531046 CD163L1Q9NR16 1453 aa18.18■□□□□ 0.5
LINC01016-204ENST00000531046 USP19O94966 1318 aa18.18■□□□□ 0.5
LINC01016-204ENST00000531046 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
LINC01016-204ENST00000531046 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
LINC01016-204ENST00000531046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
LINC01016-204ENST00000531046 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
LINC01016-204ENST00000531046 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
LINC01016-204ENST00000531046 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
LINC01016-204ENST00000531046 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
LINC01016-204ENST00000531046 NWD2Q9ULI1 1742 aa18.16■□□□□ 0.5
LINC01016-204ENST00000531046 GCP02774 474 aa18.16■□□□□ 0.5
LINC01016-204ENST00000531046 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
LINC01016-204ENST00000531046 EP400Q96L91 3159 aa18.16■□□□□ 0.5
LINC01016-204ENST00000531046 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
LINC01016-204ENST00000531046 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
LINC01016-204ENST00000531046 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
LINC01016-204ENST00000531046 TTC21AQ8NDW8 1320 aa18.15■□□□□ 0.5
LINC01016-204ENST00000531046 A0A1W2PP64 1363 aa18.15■□□□□ 0.5
LINC01016-204ENST00000531046 VPS72Q15906 364 aa18.14■□□□□ 0.49
LINC01016-204ENST00000531046 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
LINC01016-204ENST00000531046 GLI3P10071 1580 aa18.13■□□□□ 0.49
LINC01016-204ENST00000531046 SOX12O15370 315 aa18.13■□□□□ 0.49
LINC01016-204ENST00000531046 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
LINC01016-204ENST00000531046 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
LINC01016-204ENST00000531046 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
LINC01016-204ENST00000531046 NME9Q86XW9 330 aa18.12■□□□□ 0.49
LINC01016-204ENST00000531046 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
LINC01016-204ENST00000531046 NINLQ9Y2I6 1382 aa18.11■□□□□ 0.49
LINC01016-204ENST00000531046 SLIT3O75094 1523 aa18.1■□□□□ 0.49
LINC01016-204ENST00000531046 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
LINC01016-204ENST00000531046 CPDO75976 1380 aa18.1■□□□□ 0.49
LINC01016-204ENST00000531046 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
LINC01016-204ENST00000531046 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.48
LINC01016-204ENST00000531046 CAMTA1Q9Y6Y1 1673 aa18.07■□□□□ 0.48
LINC01016-204ENST00000531046 EVA1CP58658 441 aa18.07■□□□□ 0.48
LINC01016-204ENST00000531046 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 A0A0G2JS52 829 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 MYT1Q01538 1121 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
LINC01016-204ENST00000531046 SEPT12Q8IYM1 358 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 LMO7Q8WWI1 1683 aa18.06■□□□□ 0.48
LINC01016-204ENST00000531046 USP31Q70CQ4 1352 aa18.05■□□□□ 0.48
LINC01016-204ENST00000531046 UPF1Q92900 1129 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC01016-204ENST00000531046 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
LINC01016-204ENST00000531046 ARHGEF25Q86VW2 580 aa18.04■□□□□ 0.48
LINC01016-204ENST00000531046 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
LINC01016-204ENST00000531046 AATKQ6ZMQ8 1374 aa18.04■□□□□ 0.48
LINC01016-204ENST00000531046 NFAT5O94916 1531 aa18.03■□□□□ 0.48
LINC01016-204ENST00000531046 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
LINC01016-204ENST00000531046 AXIN2Q9Y2T1 843 aa18.03■□□□□ 0.48
LINC01016-204ENST00000531046 MYOM1P52179 1685 aa18.03■□□□□ 0.48
LINC01016-204ENST00000531046 ONECUT3O60422 494 aaPredicted RBP18.02■□□□□ 0.48
LINC01016-204ENST00000531046 BRWD3Q6RI45 1802 aa18.02■□□□□ 0.47
LINC01016-204ENST00000531046 USP54Q70EL1 1684 aa18.01■□□□□ 0.47
LINC01016-204ENST00000531046 COL18A1P39060 1754 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms