RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
CTNND1-228ENST00000531007 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
CTNND1-228ENST00000531007 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
CTNND1-228ENST00000531007 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
CTNND1-228ENST00000531007 ADGRB2O60241 1585 aa13.49□□□□□ -0.25
CTNND1-228ENST00000531007 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
CTNND1-228ENST00000531007 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
CTNND1-228ENST00000531007 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
CTNND1-228ENST00000531007 RALBP1Q15311 655 aa13.47□□□□□ -0.25
CTNND1-228ENST00000531007 PANK3Q9H999 370 aa13.47□□□□□ -0.25
CTNND1-228ENST00000531007 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
CTNND1-228ENST00000531007 ROBO2Q9HCK4 1378 aa13.46□□□□□ -0.25
CTNND1-228ENST00000531007 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
CTNND1-228ENST00000531007 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
CTNND1-228ENST00000531007 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.25
CTNND1-228ENST00000531007 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
CTNND1-228ENST00000531007 MYOM1P52179 1685 aa13.46□□□□□ -0.26
CTNND1-228ENST00000531007 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
CTNND1-228ENST00000531007 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
CTNND1-228ENST00000531007 KCNA6P17658 529 aa13.45□□□□□ -0.26
CTNND1-228ENST00000531007 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
CTNND1-228ENST00000531007 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CTNND1-228ENST00000531007 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
CTNND1-228ENST00000531007 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
CTNND1-228ENST00000531007 CDK19Q9BWU1 502 aa13.44□□□□□ -0.26
CTNND1-228ENST00000531007 NWD1Q149M9 1564 aa13.44□□□□□ -0.26
CTNND1-228ENST00000531007 ANKRD36BQ8N2N9 1353 aa13.44□□□□□ -0.26
CTNND1-228ENST00000531007 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
CTNND1-228ENST00000531007 SAFB2Q14151 953 aaKnown RBP eCLIP13.43□□□□□ -0.26
CTNND1-228ENST00000531007 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
CTNND1-228ENST00000531007 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
CTNND1-228ENST00000531007 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
CTNND1-228ENST00000531007 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
CTNND1-228ENST00000531007 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CTNND1-228ENST00000531007 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
CTNND1-228ENST00000531007 TTLL13PA6NNM8 815 aa13.42□□□□□ -0.26
CTNND1-228ENST00000531007 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
CTNND1-228ENST00000531007 ATP7BP35670 1465 aa13.42□□□□□ -0.26
CTNND1-228ENST00000531007 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
CTNND1-228ENST00000531007 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
CTNND1-228ENST00000531007 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
CTNND1-228ENST00000531007 NSD2O96028 1365 aa13.41□□□□□ -0.26
CTNND1-228ENST00000531007 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
CTNND1-228ENST00000531007 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
CTNND1-228ENST00000531007 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
CTNND1-228ENST00000531007 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
CTNND1-228ENST00000531007 C7P10643 843 aa13.39□□□□□ -0.27
CTNND1-228ENST00000531007 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
CTNND1-228ENST00000531007 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
CTNND1-228ENST00000531007 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
CTNND1-228ENST00000531007 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
CTNND1-228ENST00000531007 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
CTNND1-228ENST00000531007 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
CTNND1-228ENST00000531007 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
CTNND1-228ENST00000531007 CDC42BPGQ6DT37 1551 aa13.37□□□□□ -0.27
CTNND1-228ENST00000531007 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
CTNND1-228ENST00000531007 METRNQ9UJH8 293 aa13.37□□□□□ -0.27
CTNND1-228ENST00000531007 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
CTNND1-228ENST00000531007 BRD4O60885 1362 aaPredicted RBP13.35□□□□□ -0.27
CTNND1-228ENST00000531007 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 PPIP5K1Q6PFW1 1433 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 NSD3Q9BZ95 1437 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 ITSN1Q15811 1721 aa13.35□□□□□ -0.27
CTNND1-228ENST00000531007 CPSF1Q10570 1443 aaKnown RBP13.34□□□□□ -0.27
CTNND1-228ENST00000531007 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
CTNND1-228ENST00000531007 A0A1W2PP64 1363 aa13.33□□□□□ -0.27
CTNND1-228ENST00000531007 DCCP43146 1447 aa13.33□□□□□ -0.28
CTNND1-228ENST00000531007 CD163L1Q9NR16 1453 aa13.33□□□□□ -0.28
CTNND1-228ENST00000531007 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
CTNND1-228ENST00000531007 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
CTNND1-228ENST00000531007 FMN2Q9NZ56 1722 aa13.32□□□□□ -0.28
CTNND1-228ENST00000531007 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
CTNND1-228ENST00000531007 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
CTNND1-228ENST00000531007 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
CTNND1-228ENST00000531007 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
CTNND1-228ENST00000531007 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
CTNND1-228ENST00000531007 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
CTNND1-228ENST00000531007 IER5LQ5T953 404 aa13.29□□□□□ -0.28
CTNND1-228ENST00000531007 CERKQ8TCT0 537 aa13.29□□□□□ -0.28
CTNND1-228ENST00000531007 PRR36Q9H6K5 1346 aa13.29□□□□□ -0.28
CTNND1-228ENST00000531007 AKAP12Q02952 1782 aa13.29□□□□□ -0.28
CTNND1-228ENST00000531007 INSRP06213 1382 aa13.29□□□□□ -0.28
CTNND1-228ENST00000531007 MON2Q7Z3U7 1717 aa13.28□□□□□ -0.28
CTNND1-228ENST00000531007 PSEN1P49768 467 aa13.28□□□□□ -0.28
CTNND1-228ENST00000531007 PDAP1Q13442 181 aaKnown RBP13.28□□□□□ -0.28
CTNND1-228ENST00000531007 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
CTNND1-228ENST00000531007 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
CTNND1-228ENST00000531007 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.29
CTNND1-228ENST00000531007 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.29
CTNND1-228ENST00000531007 ACEP12821 1306 aa13.26□□□□□ -0.29
CTNND1-228ENST00000531007 PPP2R1AP30153 589 aa13.26□□□□□ -0.29
CTNND1-228ENST00000531007 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
CTNND1-228ENST00000531007 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
CTNND1-228ENST00000531007 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
CTNND1-228ENST00000531007 USP6P35125 1406 aa13.25□□□□□ -0.29
CTNND1-228ENST00000531007 FYB1O15117 783 aa13.25□□□□□ -0.29
CTNND1-228ENST00000531007 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms