RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
SF3B2-210ENST00000530981 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-210ENST00000530981 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
SF3B2-210ENST00000530981 ILDR2Q71H61 639 aa12.92□□□□□ -0.34
SF3B2-210ENST00000530981 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
SF3B2-210ENST00000530981 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
SF3B2-210ENST00000530981 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
SF3B2-210ENST00000530981 POTEAQ6S8J7 498 aa12.91□□□□□ -0.34
SF3B2-210ENST00000530981 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
SF3B2-210ENST00000530981 MYOM1P52179 1685 aa12.91□□□□□ -0.34
SF3B2-210ENST00000530981 A0A1W2PP64 1363 aa12.91□□□□□ -0.34
SF3B2-210ENST00000530981 NRKQ7Z2Y5 1582 aa12.9□□□□□ -0.34
SF3B2-210ENST00000530981 TMF1P82094 1093 aa12.9□□□□□ -0.34
SF3B2-210ENST00000530981 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
SF3B2-210ENST00000530981 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
SF3B2-210ENST00000530981 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
SF3B2-210ENST00000530981 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
SF3B2-210ENST00000530981 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
SF3B2-210ENST00000530981 C8orf37Q96NL8 207 aa12.88□□□□□ -0.35
SF3B2-210ENST00000530981 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
SF3B2-210ENST00000530981 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
SF3B2-210ENST00000530981 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
SF3B2-210ENST00000530981 NME9Q86XW9 330 aa12.87□□□□□ -0.35
SF3B2-210ENST00000530981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
SF3B2-210ENST00000530981 AFF2P51816 1311 aa12.87□□□□□ -0.35
SF3B2-210ENST00000530981 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
SF3B2-210ENST00000530981 USP19O94966 1318 aa12.86□□□□□ -0.35
SF3B2-210ENST00000530981 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
SF3B2-210ENST00000530981 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
SF3B2-210ENST00000530981 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-210ENST00000530981 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-210ENST00000530981 KIF7Q2M1P5 1343 aa12.85□□□□□ -0.35
SF3B2-210ENST00000530981 FBLN1P23142 703 aa12.84□□□□□ -0.35
SF3B2-210ENST00000530981 NLRP6P59044 892 aa12.84□□□□□ -0.35
SF3B2-210ENST00000530981 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
SF3B2-210ENST00000530981 POLR3GLQ9BT43 218 aa12.84□□□□□ -0.35
SF3B2-210ENST00000530981 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
SF3B2-210ENST00000530981 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
SF3B2-210ENST00000530981 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-210ENST00000530981 SLIT2O94813 1529 aa12.83□□□□□ -0.36
SF3B2-210ENST00000530981 ANKRD36BQ8N2N9 1353 aa12.82□□□□□ -0.36
SF3B2-210ENST00000530981 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
SF3B2-210ENST00000530981 TERF2IPQ9NYB0 399 aa12.82□□□□□ -0.36
SF3B2-210ENST00000530981 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
SF3B2-210ENST00000530981 SLIT3O75094 1523 aa12.82□□□□□ -0.36
SF3B2-210ENST00000530981 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-210ENST00000530981 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
SF3B2-210ENST00000530981 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 FYB1O15117 783 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 GCP02774 474 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-210ENST00000530981 TTC21AQ8NDW8 1320 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
SF3B2-210ENST00000530981 SOX12O15370 315 aa12.8□□□□□ -0.36
SF3B2-210ENST00000530981 NLRP13Q86W25 1043 aa12.8□□□□□ -0.36
SF3B2-210ENST00000530981 PANK3Q9H999 370 aa12.8□□□□□ -0.36
SF3B2-210ENST00000530981 USP21Q9UK80 565 aa12.8□□□□□ -0.36
SF3B2-210ENST00000530981 COL18A1P39060 1754 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 NFAT5O94916 1531 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-210ENST00000530981 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
SF3B2-210ENST00000530981 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 USP54Q70EL1 1684 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 CAMTA1Q9Y6Y1 1673 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
SF3B2-210ENST00000530981 LMO7Q8WWI1 1683 aa12.78□□□□□ -0.36
SF3B2-210ENST00000530981 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
SF3B2-210ENST00000530981 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
SF3B2-210ENST00000530981 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
SF3B2-210ENST00000530981 ATRNO75882 1429 aa12.78□□□□□ -0.36
SF3B2-210ENST00000530981 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
SF3B2-210ENST00000530981 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
SF3B2-210ENST00000530981 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
SF3B2-210ENST00000530981 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.37
SF3B2-210ENST00000530981 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
SF3B2-210ENST00000530981 PRDM11Q9NQV5 511 aa12.77□□□□□ -0.37
SF3B2-210ENST00000530981 CPDO75976 1380 aa12.77□□□□□ -0.37
SF3B2-210ENST00000530981 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
SF3B2-210ENST00000530981 GLI3P10071 1580 aa12.76□□□□□ -0.37
SF3B2-210ENST00000530981 ZBTB7CA1YPR0 619 aa12.75□□□□□ -0.37
SF3B2-210ENST00000530981 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-210ENST00000530981 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
SF3B2-210ENST00000530981 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
SF3B2-210ENST00000530981 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
SF3B2-210ENST00000530981 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-210ENST00000530981 AATKQ6ZMQ8 1374 aa12.72□□□□□ -0.37
SF3B2-210ENST00000530981 LTN1O94822 1766 aa12.72□□□□□ -0.37
SF3B2-210ENST00000530981 RXRBP28702 533 aa12.72□□□□□ -0.37
SF3B2-210ENST00000530981 VPS72Q15906 364 aa12.72□□□□□ -0.37
SF3B2-210ENST00000530981 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
SF3B2-210ENST00000530981 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-210ENST00000530981 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-210ENST00000530981 RGS12O14924 1447 aa12.71□□□□□ -0.37
SF3B2-210ENST00000530981 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
SF3B2-210ENST00000530981 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms