RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 ARHGEF28Q8N1W1 1705 aaKnown RBP26.47■■□□□ 1.83
PSMC3-208ENST00000530887 KIAA1210Q9ULL0 1709 aa26.46■■□□□ 1.83
PSMC3-208ENST00000530887 PAK3O75914 559 aaPredicted RBP26.46■■□□□ 1.83
PSMC3-208ENST00000530887 NRAPQ86VF7 1730 aa26.45■■□□□ 1.83
PSMC3-208ENST00000530887 A0A0G2JS52 829 aa26.45■■□□□ 1.82
PSMC3-208ENST00000530887 PLEKHG5O94827 1062 aa26.45■■□□□ 1.82
PSMC3-208ENST00000530887 MYT1Q01538 1121 aa26.45■■□□□ 1.82
PSMC3-208ENST00000530887 NUDT16Q96DE0 195 aaKnown RBP26.45■■□□□ 1.82
PSMC3-208ENST00000530887 BAG6P46379 1132 aa26.43■■□□□ 1.82
PSMC3-208ENST00000530887 PRDM11Q9NQV5 511 aa26.43■■□□□ 1.82
PSMC3-208ENST00000530887 CCDC61Q9Y6R9 512 aa26.42■■□□□ 1.82
PSMC3-208ENST00000530887 SPATA31A5Q5VU36 1347 aa26.4■■□□□ 1.82
PSMC3-208ENST00000530887 SPATA31A7Q8IWB4 1347 aa26.4■■□□□ 1.82
PSMC3-208ENST00000530887 FAM98CQ17RN3 349 aaKnown RBP26.4■■□□□ 1.82
PSMC3-208ENST00000530887 POLR3AO14802 1390 aaPredicted RBP26.4■■□□□ 1.82
PSMC3-208ENST00000530887 CDK19Q9BWU1 502 aa26.39■■□□□ 1.82
PSMC3-208ENST00000530887 SRCAPQ6ZRS2 3230 aa26.39■■□□□ 1.81
PSMC3-208ENST00000530887 CRYBG1Q9Y4K1 1723 aa26.38■■□□□ 1.81
PSMC3-208ENST00000530887 BRD4O60885 1362 aaPredicted RBP26.37■■□□□ 1.81
PSMC3-208ENST00000530887 PLEKHG3A1L390 1219 aa26.37■■□□□ 1.81
PSMC3-208ENST00000530887 DEFB132Q7Z7B7 95 aa26.36■■□□□ 1.81
PSMC3-208ENST00000530887 NBPF8Q3BBV2 869 aa26.33■■□□□ 1.81
PSMC3-208ENST00000530887 TOPAZ1Q8N9V7 1692 aa26.33■■□□□ 1.81
PSMC3-208ENST00000530887 ACEP12821 1306 aa26.33■■□□□ 1.81
PSMC3-208ENST00000530887 KIAA0232Q92628 1395 aa26.33■■□□□ 1.8
PSMC3-208ENST00000530887 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
PSMC3-208ENST00000530887 SPATA31A1Q5TZJ5 1347 aa26.31■■□□□ 1.8
PSMC3-208ENST00000530887 PHRF1Q9P1Y6 1649 aaKnown RBP26.3■■□□□ 1.8
PSMC3-208ENST00000530887 THSD7AQ9UPZ6 1657 aa26.3■■□□□ 1.8
PSMC3-208ENST00000530887 DISP2A7MBM2 1401 aa26.3■■□□□ 1.8
PSMC3-208ENST00000530887 CENPJQ9HC77 1338 aaPredicted RBP26.29■■□□□ 1.8
PSMC3-208ENST00000530887 FAM196AQ6ZSG2 479 aa26.28■■□□□ 1.8
PSMC3-208ENST00000530887 NLRP13Q86W25 1043 aa26.28■■□□□ 1.8
PSMC3-208ENST00000530887 ABTB2Q8N961 1025 aa26.28■■□□□ 1.8
PSMC3-208ENST00000530887 CPDO75976 1380 aa26.28■■□□□ 1.8
PSMC3-208ENST00000530887 EVA1CP58658 441 aa26.27■■□□□ 1.8
PSMC3-208ENST00000530887 C11orf95C9JLR9 678 aaPredicted RBP26.26■■□□□ 1.79
PSMC3-208ENST00000530887 SRPK2P78362 688 aaKnown RBP26.26■■□□□ 1.79
PSMC3-208ENST00000530887 BARGINQ6ZT62 677 aa26.26■■□□□ 1.79
PSMC3-208ENST00000530887 LRP5O75197 1615 aa26.25■■□□□ 1.79
PSMC3-208ENST00000530887 USP19O94966 1318 aa26.24■■□□□ 1.79
PSMC3-208ENST00000530887 ZC3H6P61129 1189 aaKnown RBP26.24■■□□□ 1.79
PSMC3-208ENST00000530887 STRN4Q9NRL3 753 aa26.24■■□□□ 1.79
PSMC3-208ENST00000530887 THRAP3Q9Y2W1 955 aaKnown RBP26.24■■□□□ 1.79
PSMC3-208ENST00000530887 PARD3Q8TEW0 1356 aa26.23■■□□□ 1.79
PSMC3-208ENST00000530887 PPIP5K1Q6PFW1 1433 aa26.22■■□□□ 1.79
PSMC3-208ENST00000530887 SSH2Q76I76 1423 aa26.22■■□□□ 1.79
PSMC3-208ENST00000530887 CHRNA2Q15822 529 aa26.22■■□□□ 1.79
PSMC3-208ENST00000530887 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
PSMC3-208ENST00000530887 NRKQ7Z2Y5 1582 aa26.2■■□□□ 1.79
PSMC3-208ENST00000530887 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
PSMC3-208ENST00000530887 TCP11L2Q8N4U5 519 aa26.19■■□□□ 1.78
PSMC3-208ENST00000530887 EN1Q05925 392 aaPredicted RBP26.18■■□□□ 1.78
PSMC3-208ENST00000530887 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
PSMC3-208ENST00000530887 GCP02774 474 aa26.17■■□□□ 1.78
PSMC3-208ENST00000530887 EVC2Q86UK5 1308 aa26.16■■□□□ 1.78
PSMC3-208ENST00000530887 LMO7Q8WWI1 1683 aa26.15■■□□□ 1.78
PSMC3-208ENST00000530887 QRICH2Q9H0J4 1663 aa26.15■■□□□ 1.78
PSMC3-208ENST00000530887 CABP2Q9NPB3 220 aa26.14■■□□□ 1.78
PSMC3-208ENST00000530887 TNS1Q9HBL0 1735 aaKnown RBP26.14■■□□□ 1.77
PSMC3-208ENST00000530887 USP6P35125 1406 aa26.14■■□□□ 1.77
PSMC3-208ENST00000530887 CAMTA1Q9Y6Y1 1673 aa26.13■■□□□ 1.77
PSMC3-208ENST00000530887 ZNF692Q9BU19 519 aaPredicted RBP26.13■■□□□ 1.77
PSMC3-208ENST00000530887 USP35Q9P2H5 1018 aa26.13■■□□□ 1.77
PSMC3-208ENST00000530887 FAM182BQ5T319 152 aa26.11■■□□□ 1.77
PSMC3-208ENST00000530887 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
PSMC3-208ENST00000530887 TRIM37O94972 964 aa26.1■■□□□ 1.77
PSMC3-208ENST00000530887 NLRP6P59044 892 aa26.1■■□□□ 1.77
PSMC3-208ENST00000530887 LARP1Q6PKG0 1096 aaKnown RBP26.1■■□□□ 1.77
PSMC3-208ENST00000530887 L3MBTL2Q969R5 705 aa26.1■■□□□ 1.77
PSMC3-208ENST00000530887 CABP1Q9NZU7 370 aa26.1■■□□□ 1.77
PSMC3-208ENST00000530887 CRB1P82279 1406 aa26.09■■□□□ 1.77
PSMC3-208ENST00000530887 PSDA5PKW4 1024 aaPredicted RBP26.09■■□□□ 1.77
PSMC3-208ENST00000530887 APBA3O96018 575 aa26.09■■□□□ 1.77
PSMC3-208ENST00000530887 CAMKK2Q96RR4 588 aa26.09■■□□□ 1.77
PSMC3-208ENST00000530887 COL5A2P05997 1499 aaPredicted RBP26.09■■□□□ 1.77
PSMC3-208ENST00000530887 EZH2Q15910 746 aaKnown RBP26.07■■□□□ 1.76
PSMC3-208ENST00000530887 KCNH5Q8NCM2 988 aa26.07■■□□□ 1.76
PSMC3-208ENST00000530887 SLIT3O75094 1523 aa26.07■■□□□ 1.76
PSMC3-208ENST00000530887 ROCK2O75116 1388 aaKnown RBP26.07■■□□□ 1.76
PSMC3-208ENST00000530887 TRPM1Q7Z4N2 1603 aa26.06■■□□□ 1.76
PSMC3-208ENST00000530887 NBPF14Q5TI25 921 aa26.06■■□□□ 1.76
PSMC3-208ENST00000530887 CDCA7Q9BWT1 371 aaPredicted RBP26.06■■□□□ 1.76
PSMC3-208ENST00000530887 PARP4Q9UKK3 1724 aaKnown RBP26.05■■□□□ 1.76
PSMC3-208ENST00000530887 TTC21AQ8NDW8 1320 aa26.05■■□□□ 1.76
PSMC3-208ENST00000530887 R3HDM1Q15032 1099 aaKnown RBP26.04■■□□□ 1.76
PSMC3-208ENST00000530887 OVOS2A0A0G2JMS6 1433 aa26.02■■□□□ 1.76
PSMC3-208ENST00000530887 OVOS2A0A0J9YW53 1432 aa26.02■■□□□ 1.76
PSMC3-208ENST00000530887 OVOS2Q6IE36 1432 aa26.02■■□□□ 1.76
PSMC3-208ENST00000530887 SBNO2Q9Y2G9 1366 aa25.99■■□□□ 1.75
PSMC3-208ENST00000530887 TOM1L2Q6ZVM7 507 aa25.99■■□□□ 1.75
PSMC3-208ENST00000530887 WDR17Q8IZU2 1322 aa25.98■■□□□ 1.75
PSMC3-208ENST00000530887 DDB1Q16531 1140 aa25.98■■□□□ 1.75
PSMC3-208ENST00000530887 RREB1Q92766 1687 aa25.97■■□□□ 1.75
PSMC3-208ENST00000530887 TTC21BQ7Z4L5 1316 aa25.97■■□□□ 1.75
PSMC3-208ENST00000530887 ABCC6O95255 1503 aa25.97■■□□□ 1.75
PSMC3-208ENST00000530887 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
PSMC3-208ENST00000530887 PIK3C2AO00443 1686 aa25.96■■□□□ 1.75
PSMC3-208ENST00000530887 ZBTB7CA1YPR0 619 aa25.95■■□□□ 1.74
PSMC3-208ENST00000530887 ARHGEF25Q86VW2 580 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms