RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PRR20EP86478 221 aa15.03■□□□□ -0
CSDE1-213ENST00000530784 PRR20CP86479 221 aa15.03■□□□□ -0
CSDE1-213ENST00000530784 PRR20DP86480 221 aa15.03■□□□□ -0
CSDE1-213ENST00000530784 PRR20BP86481 221 aa15.03■□□□□ -0
CSDE1-213ENST00000530784 PRR20AP86496 221 aa15.03■□□□□ -0
CSDE1-213ENST00000530784 WNT7AO00755 349 aa15.01□□□□□ -0.01
CSDE1-213ENST00000530784 RC3H1Q5TC82 1133 aaKnown RBP15.01□□□□□ -0.01
CSDE1-213ENST00000530784 NR6A1Q15406 480 aa15□□□□□ -0.01
CSDE1-213ENST00000530784 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
CSDE1-213ENST00000530784 ZNF511Q8NB15 262 aa14.99□□□□□ -0.01
CSDE1-213ENST00000530784 NRG2O14511 850 aaPredicted RBP14.98□□□□□ -0.01
CSDE1-213ENST00000530784 LAPTM4AQ15012 233 aa14.98□□□□□ -0.01
CSDE1-213ENST00000530784 MRGPRX2Q96LB1 330 aa14.98□□□□□ -0.01
CSDE1-213ENST00000530784 EPS8L1Q8TE68 723 aa14.97□□□□□ -0.01
CSDE1-213ENST00000530784 ARMC2Q8NEN0 867 aa14.95□□□□□ -0.02
CSDE1-213ENST00000530784 BANK1Q8NDB2 785 aa14.94□□□□□ -0.02
CSDE1-213ENST00000530784 FOXJ1Q92949 421 aa14.94□□□□□ -0.02
CSDE1-213ENST00000530784 TMEM132AQ24JP5 1023 aa14.93□□□□□ -0.02
CSDE1-213ENST00000530784 EHBP1Q8NDI1 1231 aa14.93□□□□□ -0.02
CSDE1-213ENST00000530784 TOR4AQ9NXH8 423 aa14.93□□□□□ -0.02
CSDE1-213ENST00000530784 CYP4X1Q8N118 509 aa14.92□□□□□ -0.02
CSDE1-213ENST00000530784 TRIM34Q9BYJ4 488 aa14.91□□□□□ -0.02
CSDE1-213ENST00000530784 FKBPLQ9UIM3 349 aa14.91□□□□□ -0.02
CSDE1-213ENST00000530784 NBPF14Q5TI25 921 aa14.9□□□□□ -0.02
CSDE1-213ENST00000530784 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
CSDE1-213ENST00000530784 TTC24A2A3L6 582 aaPredicted RBP14.89□□□□□ -0.03
CSDE1-213ENST00000530784 SNIP1Q8TAD8 396 aaKnown RBP14.89□□□□□ -0.03
CSDE1-213ENST00000530784 SIAH2O43255 324 aa14.88□□□□□ -0.03
CSDE1-213ENST00000530784 AGERQ15109 404 aa14.88□□□□□ -0.03
CSDE1-213ENST00000530784 GJD4Q96KN9 370 aaPredicted RBP14.88□□□□□ -0.03
CSDE1-213ENST00000530784 C4orf48Q5BLP8 95 aa14.87□□□□□ -0.03
CSDE1-213ENST00000530784 Q6ZNB5 142 aa14.87□□□□□ -0.03
CSDE1-213ENST00000530784 MTMR14Q8NCE2 650 aa14.87□□□□□ -0.03
CSDE1-213ENST00000530784 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
CSDE1-213ENST00000530784 VARSP26640 1264 aaKnown RBP14.86□□□□□ -0.03
CSDE1-213ENST00000530784 BPHLQ86WA6 291 aaPredicted RBP14.86□□□□□ -0.03
CSDE1-213ENST00000530784 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
CSDE1-213ENST00000530784 SH3BP5LQ7L8J4 393 aa14.85□□□□□ -0.03
CSDE1-213ENST00000530784 J3QL48 77 aa14.84□□□□□ -0.03
CSDE1-213ENST00000530784 SH3RF1Q7Z6J0 888 aa14.84□□□□□ -0.03
CSDE1-213ENST00000530784 PKDCCQ504Y2 493 aa14.83□□□□□ -0.04
CSDE1-213ENST00000530784 PDXDC2PQ6P474 469 aa14.83□□□□□ -0.04
CSDE1-213ENST00000530784 DGAT1O75907 488 aa14.82□□□□□ -0.04
CSDE1-213ENST00000530784 ALDH1A1P00352 501 aa14.82□□□□□ -0.04
CSDE1-213ENST00000530784 SMPD1P17405 629 aa14.82□□□□□ -0.04
CSDE1-213ENST00000530784 ZC3H4Q9UPT8 1303 aaKnown RBP14.82□□□□□ -0.04
CSDE1-213ENST00000530784 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
CSDE1-213ENST00000530784 PNMA1Q8ND90 353 aa14.81□□□□□ -0.04
CSDE1-213ENST00000530784 FAM174AQ8TBP5 190 aa14.81□□□□□ -0.04
CSDE1-213ENST00000530784 TLL2Q9Y6L7 1015 aa14.81□□□□□ -0.04
CSDE1-213ENST00000530784 CARD14Q9BXL6 1004 aa14.8□□□□□ -0.04
CSDE1-213ENST00000530784 SOCS7O14512 581 aa14.79□□□□□ -0.04
CSDE1-213ENST00000530784 LCE2BO14633 110 aa14.78□□□□□ -0.04
CSDE1-213ENST00000530784 ARHGAP9Q9BRR9 750 aa14.78□□□□□ -0.04
CSDE1-213ENST00000530784 OCSTAMPQ9BR26 566 aa14.77□□□□□ -0.05
CSDE1-213ENST00000530784 C1QTNF2Q9BXJ5 285 aa14.77□□□□□ -0.05
CSDE1-213ENST00000530784 PTK2Q05397 1052 aa14.76□□□□□ -0.05
CSDE1-213ENST00000530784 MPNDQ8N594 471 aa14.76□□□□□ -0.05
CSDE1-213ENST00000530784 TRAF7Q6Q0C0 670 aa14.75□□□□□ -0.05
CSDE1-213ENST00000530784 MYT1Q01538 1121 aa14.74□□□□□ -0.05
CSDE1-213ENST00000530784 ARID5BQ14865 1188 aa14.74□□□□□ -0.05
CSDE1-213ENST00000530784 ERFEQ4G0M1 354 aa14.74□□□□□ -0.05
CSDE1-213ENST00000530784 GPSM3Q9Y4H4 160 aa14.74□□□□□ -0.05
CSDE1-213ENST00000530784 APBB1O00213 710 aa14.73□□□□□ -0.05
CSDE1-213ENST00000530784 HPS1Q92902 700 aa14.73□□□□□ -0.05
CSDE1-213ENST00000530784 CDK15Q96Q40 435 aa14.73□□□□□ -0.05
CSDE1-213ENST00000530784 NDUFB9Q9Y6M9 179 aa14.73□□□□□ -0.05
CSDE1-213ENST00000530784 WASF2Q9Y6W5 498 aa14.73□□□□□ -0.05
CSDE1-213ENST00000530784 GPR37L1O60883 481 aa14.72□□□□□ -0.05
CSDE1-213ENST00000530784 MCM6Q14566 821 aa14.72□□□□□ -0.05
CSDE1-213ENST00000530784 ZBTB33Q86T24 672 aa14.72□□□□□ -0.05
CSDE1-213ENST00000530784 AVPP01185 164 aa14.71□□□□□ -0.05
CSDE1-213ENST00000530784 TRMT44Q8IYL2 757 aaKnown RBP14.71□□□□□ -0.05
CSDE1-213ENST00000530784 ADAM32Q8TC27 787 aa14.71□□□□□ -0.05
CSDE1-213ENST00000530784 TBC1D2BQ9UPU7 963 aa14.69□□□□□ -0.06
CSDE1-213ENST00000530784 ADH1CP00326 375 aa14.68□□□□□ -0.06
CSDE1-213ENST00000530784 GRM5P41594 1212 aa14.68□□□□□ -0.06
CSDE1-213ENST00000530784 ZBBXA8MT70 800 aa14.66□□□□□ -0.06
CSDE1-213ENST00000530784 ST8SIA5O15466 376 aa14.66□□□□□ -0.06
CSDE1-213ENST00000530784 FBXO45P0C2W1 286 aa14.66□□□□□ -0.06
CSDE1-213ENST00000530784 MAP4K5Q9Y4K4 846 aa14.66□□□□□ -0.06
CSDE1-213ENST00000530784 NNTQ13423 1086 aa14.65□□□□□ -0.06
CSDE1-213ENST00000530784 VASH1Q7L8A9 365 aaPredicted RBP14.65□□□□□ -0.06
CSDE1-213ENST00000530784 SLC10A4Q96EP9 437 aa14.65□□□□□ -0.06
CSDE1-213ENST00000530784 AAASQ9NRG9 546 aa14.65□□□□□ -0.06
CSDE1-213ENST00000530784 GDPD2Q9HCC8 539 aa14.64□□□□□ -0.07
CSDE1-213ENST00000530784 PRM3Q9NNZ6 103 aa14.64□□□□□ -0.07
CSDE1-213ENST00000530784 CRIPAKQ8N1N5 446 aa14.63□□□□□ -0.07
CSDE1-213ENST00000530784 AXIN1O15169 862 aa14.62□□□□□ -0.07
CSDE1-213ENST00000530784 NR3C2P08235 984 aa14.62□□□□□ -0.07
CSDE1-213ENST00000530784 CTC1Q2NKJ3 1217 aa14.62□□□□□ -0.07
CSDE1-213ENST00000530784 FSHRP23945 695 aa14.61□□□□□ -0.07
CSDE1-213ENST00000530784 SMCPP49901 116 aaPredicted RBP14.61□□□□□ -0.07
CSDE1-213ENST00000530784 NR5A1Q13285 461 aa14.61□□□□□ -0.07
CSDE1-213ENST00000530784 FLIIQ13045 1269 aa14.6□□□□□ -0.07
CSDE1-213ENST00000530784 NR1H3Q13133 447 aa14.6□□□□□ -0.07
CSDE1-213ENST00000530784 DZIP3Q86Y13 1208 aaKnown RBP14.6□□□□□ -0.07
CSDE1-213ENST00000530784 IRF5Q13568 498 aa14.59□□□□□ -0.07
CSDE1-213ENST00000530784 KCTD15Q96SI1 283 aaPredicted RBP14.59□□□□□ -0.07
CSDE1-213ENST00000530784 ABL2P42684 1182 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms