RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
SSBP3-213ENST00000530618 NRKQ7Z2Y5 1582 aa6.84□□□□□ -1.31
SSBP3-213ENST00000530618 KRT28Q7Z3Y7 464 aa6.84□□□□□ -1.31
SSBP3-213ENST00000530618 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-213ENST00000530618 NEUROD1Q13562 356 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 UNC5CLQ8IV45 518 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 CABLES1Q8TDN4 633 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 PRAM1Q96QH2 718 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 PHF8Q9UPP1 1060 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 RREB1Q92766 1687 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 BLMP54132 1417 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-213ENST00000530618 WNK3Q9BYP7 1800 aa6.83□□□□□ -1.32
SSBP3-213ENST00000530618 VPS72Q15906 364 aa6.82□□□□□ -1.32
SSBP3-213ENST00000530618 COL18A1P39060 1754 aa6.82□□□□□ -1.32
SSBP3-213ENST00000530618 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
SSBP3-213ENST00000530618 SBF2Q86WG5 1849 aa6.81□□□□□ -1.32
SSBP3-213ENST00000530618 NUP188Q5SRE5 1749 aa6.81□□□□□ -1.32
SSBP3-213ENST00000530618 PEAK1Q9H792 1746 aa6.81□□□□□ -1.32
SSBP3-213ENST00000530618 QRICH2Q9H0J4 1663 aa6.81□□□□□ -1.32
SSBP3-213ENST00000530618 UTRNP46939 3433 aa6.8□□□□□ -1.32
SSBP3-213ENST00000530618 FAM83GA6ND36 823 aa6.8□□□□□ -1.32
SSBP3-213ENST00000530618 SAFB2Q14151 953 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSBP3-213ENST00000530618 PMFBP1Q8TBY8 1022 aa6.8□□□□□ -1.32
SSBP3-213ENST00000530618 PARP4Q9UKK3 1724 aaKnown RBP6.8□□□□□ -1.32
SSBP3-213ENST00000530618 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
SSBP3-213ENST00000530618 DISP2A7MBM2 1401 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 DEFB132Q7Z7B7 95 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 SEPT12Q8IYM1 358 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 PIK3C2AO00443 1686 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 CAMTA1Q9Y6Y1 1673 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 RGPD5Q99666 1765 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 POLR3AO14802 1390 aaPredicted RBP6.79□□□□□ -1.32
SSBP3-213ENST00000530618 TRPM1Q7Z4N2 1603 aa6.79□□□□□ -1.32
SSBP3-213ENST00000530618 MINK1Q8N4C8 1332 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-213ENST00000530618 WASLO00401 505 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-213ENST00000530618 CCDC125Q86Z20 511 aa6.78□□□□□ -1.32
SSBP3-213ENST00000530618 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
SSBP3-213ENST00000530618 HIRIP3Q9BW71 556 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-213ENST00000530618 TRAK1Q9UPV9 953 aa6.78□□□□□ -1.32
SSBP3-213ENST00000530618 SPATA31A5Q5VU36 1347 aa6.77□□□□□ -1.32
SSBP3-213ENST00000530618 SPATA31A7Q8IWB4 1347 aa6.77□□□□□ -1.32
SSBP3-213ENST00000530618 RGPD3A6NKT7 1758 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-213ENST00000530618 RGPD4Q7Z3J3 1758 aa6.77□□□□□ -1.33
SSBP3-213ENST00000530618 SLIT3O75094 1523 aa6.77□□□□□ -1.33
SSBP3-213ENST00000530618 LRRC37A3O60309 1634 aa6.77□□□□□ -1.33
SSBP3-213ENST00000530618 DSG3P32926 999 aa6.77□□□□□ -1.33
SSBP3-213ENST00000530618 PSME1Q06323 249 aa6.77□□□□□ -1.33
SSBP3-213ENST00000530618 EIF3AQ14152 1382 aaKnown RBP6.77□□□□□ -1.33
SSBP3-213ENST00000530618 USP54Q70EL1 1684 aa6.77□□□□□ -1.33
SSBP3-213ENST00000530618 MON2Q7Z3U7 1717 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 SLC24A1O60721 1099 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 KRT27Q7Z3Y8 459 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 SIN3AQ96ST3 1273 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 BTG4Q9NY30 223 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 KDM2AQ9Y2K7 1162 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 KIAA0232Q92628 1395 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 SSH2Q76I76 1423 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 USP19O94966 1318 aa6.76□□□□□ -1.33
SSBP3-213ENST00000530618 FAM98CQ17RN3 349 aaKnown RBP6.75□□□□□ -1.33
SSBP3-213ENST00000530618 NUDT16Q96DE0 195 aaKnown RBP6.75□□□□□ -1.33
SSBP3-213ENST00000530618 POGKQ9P215 609 aa6.75□□□□□ -1.33
SSBP3-213ENST00000530618 ZRANB1Q9UGI0 708 aa6.75□□□□□ -1.33
SSBP3-213ENST00000530618 SPATA31A1Q5TZJ5 1347 aa6.75□□□□□ -1.33
SSBP3-213ENST00000530618 CASZ1Q86V15 1759 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 COL5A2P05997 1499 aaPredicted RBP6.74□□□□□ -1.33
SSBP3-213ENST00000530618 CPDO75976 1380 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 GPRASP1Q5JY77 1395 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 PLEKHG5O94827 1062 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 NBPF1Q3BBV0 1214 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 FAM182BQ5T319 152 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 L3MBTL2Q969R5 705 aa6.74□□□□□ -1.33
SSBP3-213ENST00000530618 ROCK2O75116 1388 aaKnown RBP6.73□□□□□ -1.33
SSBP3-213ENST00000530618 PLEKHG3A1L390 1219 aa6.73□□□□□ -1.33
SSBP3-213ENST00000530618 ACEP12821 1306 aa6.73□□□□□ -1.33
SSBP3-213ENST00000530618 NFAT5O94916 1531 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 HOXD11P31277 338 aaPredicted RBP6.72□□□□□ -1.33
SSBP3-213ENST00000530618 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 NBPF8Q3BBV2 869 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 LMOD2Q6P5Q4 547 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 CDK19Q9BWU1 502 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 USP6P35125 1406 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 PPIP5K1Q6PFW1 1433 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 LTN1O94822 1766 aa6.72□□□□□ -1.33
SSBP3-213ENST00000530618 GOLGB1Q14789 3259 aaKnown RBP6.72□□□□□ -1.33
SSBP3-213ENST00000530618 EN1Q05925 392 aaPredicted RBP6.71□□□□□ -1.34
SSBP3-213ENST00000530618 NGDNQ8NEJ9 315 aaKnown RBP6.71□□□□□ -1.34
SSBP3-213ENST00000530618 CAMKK2Q96RR4 588 aa6.71□□□□□ -1.34
SSBP3-213ENST00000530618 CARD11Q9BXL7 1154 aa6.71□□□□□ -1.34
SSBP3-213ENST00000530618 PRDM11Q9NQV5 511 aa6.71□□□□□ -1.34
SSBP3-213ENST00000530618 PSDA5PKW4 1024 aaPredicted RBP6.7□□□□□ -1.34
SSBP3-213ENST00000530618 HAP1P54257 671 aaPredicted RBP6.7□□□□□ -1.34
SSBP3-213ENST00000530618 CCDC9Q9Y3X0 531 aaKnown RBP6.7□□□□□ -1.34
SSBP3-213ENST00000530618 CCDC61Q9Y6R9 512 aa6.7□□□□□ -1.34
SSBP3-213ENST00000530618 BRD4O60885 1362 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 PAPPAQ13219 1627 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 CPSF1Q10570 1443 aaKnown RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 NHSQ6T4R5 1651 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 CD163L1Q9NR16 1453 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 PAK3O75914 559 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 BAG6P46379 1132 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms