RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 VPS72Q15906 364 aa27.78■■■□□ 2.04
SYVN1-212ENST00000530451 COL14A1Q05707 1796 aaKnown RBP27.78■■■□□ 2.04
SYVN1-212ENST00000530451 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
SYVN1-212ENST00000530451 QRICH2Q9H0J4 1663 aa27.75■■■□□ 2.03
SYVN1-212ENST00000530451 BTG4Q9NY30 223 aa27.75■■■□□ 2.03
SYVN1-212ENST00000530451 SEPT12Q8IYM1 358 aa27.74■■■□□ 2.03
SYVN1-212ENST00000530451 L3MBTL2Q969R5 705 aa27.74■■■□□ 2.03
SYVN1-212ENST00000530451 PHRF1Q9P1Y6 1649 aaKnown RBP27.72■■■□□ 2.03
SYVN1-212ENST00000530451 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
SYVN1-212ENST00000530451 NUTM2GQ5VZR2 741 aa27.72■■■□□ 2.03
SYVN1-212ENST00000530451 ACEP12821 1306 aa27.71■■■□□ 2.03
SYVN1-212ENST00000530451 A0A0G2JS52 829 aa27.7■■■□□ 2.02
SYVN1-212ENST00000530451 MYT1Q01538 1121 aa27.7■■■□□ 2.02
SYVN1-212ENST00000530451 CCDC61Q9Y6R9 512 aa27.7■■■□□ 2.02
SYVN1-212ENST00000530451 CENPJQ9HC77 1338 aaPredicted RBP27.69■■■□□ 2.02
SYVN1-212ENST00000530451 SRPK2P78362 688 aaKnown RBP27.69■■■□□ 2.02
SYVN1-212ENST00000530451 TRPM1Q7Z4N2 1603 aa27.68■■■□□ 2.02
SYVN1-212ENST00000530451 NBPF8Q3BBV2 869 aa27.68■■■□□ 2.02
SYVN1-212ENST00000530451 CABP2Q9NPB3 220 aa27.67■■■□□ 2.02
SYVN1-212ENST00000530451 PRDM11Q9NQV5 511 aa27.67■■■□□ 2.02
SYVN1-212ENST00000530451 POLR3AO14802 1390 aaPredicted RBP27.67■■■□□ 2.02
SYVN1-212ENST00000530451 CCDC125Q86Z20 511 aa27.66■■■□□ 2.02
SYVN1-212ENST00000530451 PLEKHG3A1L390 1219 aa27.65■■■□□ 2.02
SYVN1-212ENST00000530451 ONECUT3O60422 494 aaPredicted RBP27.65■■■□□ 2.02
SYVN1-212ENST00000530451 FAM98CQ17RN3 349 aaKnown RBP27.65■■■□□ 2.02
SYVN1-212ENST00000530451 ZC3H6P61129 1189 aaKnown RBP27.64■■■□□ 2.02
SYVN1-212ENST00000530451 CHRNA2Q15822 529 aa27.64■■■□□ 2.02
SYVN1-212ENST00000530451 PPIP5K1Q6PFW1 1433 aa27.64■■■□□ 2.02
SYVN1-212ENST00000530451 KIAA0232Q92628 1395 aa27.63■■■□□ 2.01
SYVN1-212ENST00000530451 KRT27Q7Z3Y8 459 aa27.63■■■□□ 2.01
SYVN1-212ENST00000530451 BLMP54132 1417 aaPredicted RBP27.61■■■□□ 2.01
SYVN1-212ENST00000530451 ABTB2Q8N961 1025 aa27.61■■■□□ 2.01
SYVN1-212ENST00000530451 STRN4Q9NRL3 753 aa27.58■■■□□ 2.01
SYVN1-212ENST00000530451 SPATA31A5Q5VU36 1347 aa27.58■■■□□ 2.01
SYVN1-212ENST00000530451 SPATA31A7Q8IWB4 1347 aa27.58■■■□□ 2.01
SYVN1-212ENST00000530451 NRKQ7Z2Y5 1582 aa27.57■■■□□ 2
SYVN1-212ENST00000530451 DEFB132Q7Z7B7 95 aa27.57■■■□□ 2
SYVN1-212ENST00000530451 ZRANB1Q9UGI0 708 aa27.57■■■□□ 2
SYVN1-212ENST00000530451 SF3B2Q13435 895 aaKnown RBP27.56■■■□□ 2
SYVN1-212ENST00000530451 ROCK2O75116 1388 aaKnown RBP27.56■■■□□ 2
SYVN1-212ENST00000530451 CABP1Q9NZU7 370 aa27.55■■■□□ 2
SYVN1-212ENST00000530451 FAM182BQ5T319 152 aa27.54■■■□□ 2
SYVN1-212ENST00000530451 THSD7AQ9UPZ6 1657 aa27.53■■■□□ 2
SYVN1-212ENST00000530451 SPATA31A1Q5TZJ5 1347 aa27.5■■□□□ 1.99
SYVN1-212ENST00000530451 EVC2Q86UK5 1308 aa27.5■■□□□ 1.99
SYVN1-212ENST00000530451 NLRP13Q86W25 1043 aa27.5■■□□□ 1.99
SYVN1-212ENST00000530451 USP35Q9P2H5 1018 aa27.5■■□□□ 1.99
SYVN1-212ENST00000530451 EVA1CP58658 441 aa27.49■■□□□ 1.99
SYVN1-212ENST00000530451 CAMTA1Q9Y6Y1 1673 aa27.49■■□□□ 1.99
SYVN1-212ENST00000530451 USP19O94966 1318 aa27.48■■□□□ 1.99
SYVN1-212ENST00000530451 LMO7Q8WWI1 1683 aa27.48■■□□□ 1.99
SYVN1-212ENST00000530451 USP6P35125 1406 aa27.48■■□□□ 1.99
SYVN1-212ENST00000530451 RGPD1P0DJD0 1748 aa27.47■■□□□ 1.99
SYVN1-212ENST00000530451 ZBTB7CA1YPR0 619 aa27.47■■□□□ 1.99
SYVN1-212ENST00000530451 AKAP12Q02952 1782 aa27.47■■□□□ 1.99
SYVN1-212ENST00000530451 GCP02774 474 aa27.46■■□□□ 1.99
SYVN1-212ENST00000530451 SSH2Q76I76 1423 aa27.45■■□□□ 1.98
SYVN1-212ENST00000530451 PIK3C2AO00443 1686 aa27.45■■□□□ 1.98
SYVN1-212ENST00000530451 NLRP6P59044 892 aa27.44■■□□□ 1.98
SYVN1-212ENST00000530451 LARP1Q6PKG0 1096 aaKnown RBP27.44■■□□□ 1.98
SYVN1-212ENST00000530451 CPDO75976 1380 aa27.43■■□□□ 1.98
SYVN1-212ENST00000530451 BRD4O60885 1362 aaPredicted RBP27.42■■□□□ 1.98
SYVN1-212ENST00000530451 BAG6P46379 1132 aa27.41■■□□□ 1.98
SYVN1-212ENST00000530451 TNS1Q9HBL0 1735 aaKnown RBP27.41■■□□□ 1.98
SYVN1-212ENST00000530451 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
SYVN1-212ENST00000530451 SRCAPQ6ZRS2 3230 aa27.39■■□□□ 1.98
SYVN1-212ENST00000530451 SLIT3O75094 1523 aa27.38■■□□□ 1.97
SYVN1-212ENST00000530451 CARD11Q9BXL7 1154 aa27.38■■□□□ 1.97
SYVN1-212ENST00000530451 TONSLQ96HA7 1378 aa27.37■■□□□ 1.97
SYVN1-212ENST00000530451 EN1Q05925 392 aaPredicted RBP27.36■■□□□ 1.97
SYVN1-212ENST00000530451 COL5A2P05997 1499 aaPredicted RBP27.36■■□□□ 1.97
SYVN1-212ENST00000530451 TCP11L2Q8N4U5 519 aa27.35■■□□□ 1.97
SYVN1-212ENST00000530451 TTC21BQ7Z4L5 1316 aa27.35■■□□□ 1.97
SYVN1-212ENST00000530451 COL18A1P39060 1754 aa27.35■■□□□ 1.97
SYVN1-212ENST00000530451 BARGINQ6ZT62 677 aa27.34■■□□□ 1.97
SYVN1-212ENST00000530451 ZNF692Q9BU19 519 aaPredicted RBP27.34■■□□□ 1.97
SYVN1-212ENST00000530451 MON2Q7Z3U7 1717 aa27.33■■□□□ 1.97
SYVN1-212ENST00000530451 SOX12O15370 315 aa27.33■■□□□ 1.97
SYVN1-212ENST00000530451 TRIM37O94972 964 aa27.32■■□□□ 1.96
SYVN1-212ENST00000530451 PDE3BQ13370 1112 aa27.32■■□□□ 1.96
SYVN1-212ENST00000530451 PSDA5PKW4 1024 aaPredicted RBP27.31■■□□□ 1.96
SYVN1-212ENST00000530451 FAM196AQ6ZSG2 479 aa27.31■■□□□ 1.96
SYVN1-212ENST00000530451 KTN1Q86UP2 1357 aaKnown RBP27.31■■□□□ 1.96
SYVN1-212ENST00000530451 PARP4Q9UKK3 1724 aaKnown RBP27.3■■□□□ 1.96
SYVN1-212ENST00000530451 AATKQ6ZMQ8 1374 aa27.29■■□□□ 1.96
SYVN1-212ENST00000530451 CPSF1Q10570 1443 aaKnown RBP27.29■■□□□ 1.96
SYVN1-212ENST00000530451 CRB1P82279 1406 aa27.28■■□□□ 1.96
SYVN1-212ENST00000530451 SBNO2Q9Y2G9 1366 aa27.27■■□□□ 1.96
SYVN1-212ENST00000530451 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
SYVN1-212ENST00000530451 THRAP3Q9Y2W1 955 aaKnown RBP27.27■■□□□ 1.96
SYVN1-212ENST00000530451 WNK3Q9BYP7 1800 aa27.27■■□□□ 1.96
SYVN1-212ENST00000530451 TTC21AQ8NDW8 1320 aa27.26■■□□□ 1.95
SYVN1-212ENST00000530451 EZH2Q15910 746 aaKnown RBP27.26■■□□□ 1.95
SYVN1-212ENST00000530451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.26■■□□□ 1.95
SYVN1-212ENST00000530451 TMC1Q8TDI8 760 aa27.26■■□□□ 1.95
SYVN1-212ENST00000530451 AXIN2Q9Y2T1 843 aa27.26■■□□□ 1.95
SYVN1-212ENST00000530451 TOM1L2Q6ZVM7 507 aa27.25■■□□□ 1.95
SYVN1-212ENST00000530451 APBA3O96018 575 aa27.24■■□□□ 1.95
SYVN1-212ENST00000530451 KCNH5Q8NCM2 988 aa27.24■■□□□ 1.95
SYVN1-212ENST00000530451 ARHGEF25Q86VW2 580 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 1263.6 ms