RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 PSME1Q06323 249 aa15.31■□□□□ 0.04
CAPN1-218ENST00000530442 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
CAPN1-218ENST00000530442 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
CAPN1-218ENST00000530442 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
CAPN1-218ENST00000530442 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
CAPN1-218ENST00000530442 LRP6O75581 1613 aa15.3■□□□□ 0.04
CAPN1-218ENST00000530442 KIF7Q2M1P5 1343 aa15.3■□□□□ 0.04
CAPN1-218ENST00000530442 ANKRD36BQ8N2N9 1353 aa15.3■□□□□ 0.04
CAPN1-218ENST00000530442 LRRC59Q96AG4 307 aaKnown RBP15.3■□□□□ 0.04
CAPN1-218ENST00000530442 KIF20BQ96Q89 1820 aa15.29■□□□□ 0.04
CAPN1-218ENST00000530442 KTN1Q86UP2 1357 aaKnown RBP15.29■□□□□ 0.04
CAPN1-218ENST00000530442 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
CAPN1-218ENST00000530442 BRD4O60885 1362 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-218ENST00000530442 EDC4Q6P2E9 1401 aaKnown RBP15.27■□□□□ 0.04
CAPN1-218ENST00000530442 CCDC7Q96M83 1385 aa15.27■□□□□ 0.04
CAPN1-218ENST00000530442 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
CAPN1-218ENST00000530442 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
CAPN1-218ENST00000530442 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-218ENST00000530442 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-218ENST00000530442 ZNF692Q9BU19 519 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-218ENST00000530442 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
CAPN1-218ENST00000530442 SPATA31A6Q5VVP1 1343 aa15.24■□□□□ 0.03
CAPN1-218ENST00000530442 TTC21BQ7Z4L5 1316 aa15.24■□□□□ 0.03
CAPN1-218ENST00000530442 SLIT3O75094 1523 aa15.24■□□□□ 0.03
CAPN1-218ENST00000530442 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
CAPN1-218ENST00000530442 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
CAPN1-218ENST00000530442 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
CAPN1-218ENST00000530442 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
CAPN1-218ENST00000530442 OVOS2A0A0J9YW53 1432 aa15.21■□□□□ 0.03
CAPN1-218ENST00000530442 OVOS2Q6IE36 1432 aa15.21■□□□□ 0.03
CAPN1-218ENST00000530442 PLCH1Q4KWH8 1693 aa15.21■□□□□ 0.03
CAPN1-218ENST00000530442 USP19O94966 1318 aa15.2■□□□□ 0.02
CAPN1-218ENST00000530442 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
CAPN1-218ENST00000530442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.02
CAPN1-218ENST00000530442 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
CAPN1-218ENST00000530442 CARD14Q9BXL6 1004 aa15.2■□□□□ 0.02
CAPN1-218ENST00000530442 NFAT5O94916 1531 aa15.19■□□□□ 0.02
CAPN1-218ENST00000530442 CABLES1Q8TDN4 633 aa15.19■□□□□ 0.02
CAPN1-218ENST00000530442 USP31Q70CQ4 1352 aa15.19■□□□□ 0.02
CAPN1-218ENST00000530442 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-218ENST00000530442 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-218ENST00000530442 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
CAPN1-218ENST00000530442 NME9Q86XW9 330 aa15.18■□□□□ 0.02
CAPN1-218ENST00000530442 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-218ENST00000530442 LTN1O94822 1766 aa15.18■□□□□ 0.02
CAPN1-218ENST00000530442 PANK3Q9H999 370 aa15.17■□□□□ 0.02
CAPN1-218ENST00000530442 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
CAPN1-218ENST00000530442 COL14A1Q05707 1796 aaKnown RBP15.16■□□□□ 0.02
CAPN1-218ENST00000530442 NLRP6P59044 892 aa15.16■□□□□ 0.02
CAPN1-218ENST00000530442 NRAPQ86VF7 1730 aa15.16■□□□□ 0.02
CAPN1-218ENST00000530442 NWD2Q9ULI1 1742 aa15.16■□□□□ 0.02
CAPN1-218ENST00000530442 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
CAPN1-218ENST00000530442 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.15■□□□□ 0.02
CAPN1-218ENST00000530442 NLRP13Q86W25 1043 aa15.15■□□□□ 0.02
CAPN1-218ENST00000530442 ADAMTS2O95450 1211 aa15.14■□□□□ 0.01
CAPN1-218ENST00000530442 COL18A1P39060 1754 aa15.13■□□□□ 0.01
CAPN1-218ENST00000530442 KIAA0232Q92628 1395 aa15.12■□□□□ 0.01
CAPN1-218ENST00000530442 FYB1O15117 783 aa15.12■□□□□ 0.01
CAPN1-218ENST00000530442 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-218ENST00000530442 MEX3CQ5U5Q3 659 aaKnown RBP15.12■□□□□ 0.01
CAPN1-218ENST00000530442 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
CAPN1-218ENST00000530442 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
CAPN1-218ENST00000530442 SLIT2O94813 1529 aa15.12■□□□□ 0.01
CAPN1-218ENST00000530442 CPDO75976 1380 aa15.11■□□□□ 0.01
CAPN1-218ENST00000530442 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
CAPN1-218ENST00000530442 GCP02774 474 aa15.11■□□□□ 0.01
CAPN1-218ENST00000530442 C8orf37Q96NL8 207 aa15.11■□□□□ 0.01
CAPN1-218ENST00000530442 ABCC6O95255 1503 aa15.11■□□□□ 0.01
CAPN1-218ENST00000530442 NSD2O96028 1365 aa15.11■□□□□ 0.01
CAPN1-218ENST00000530442 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
CAPN1-218ENST00000530442 SOX12O15370 315 aa15.09■□□□□ 0.01
CAPN1-218ENST00000530442 PER1O15534 1290 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-218ENST00000530442 COG3Q96JB2 828 aa15.09■□□□□ 0.01
CAPN1-218ENST00000530442 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
CAPN1-218ENST00000530442 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
CAPN1-218ENST00000530442 KCNH5Q8NCM2 988 aa15.08■□□□□ 0
CAPN1-218ENST00000530442 AFF2P51816 1311 aa15.08■□□□□ 0
CAPN1-218ENST00000530442 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
CAPN1-218ENST00000530442 BCL9LQ86UU0 1499 aa15.08■□□□□ 0
CAPN1-218ENST00000530442 CAMTA1Q9Y6Y1 1673 aa15.07■□□□□ 0
CAPN1-218ENST00000530442 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
CAPN1-218ENST00000530442 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
CAPN1-218ENST00000530442 FAM83GA6ND36 823 aa15.06■□□□□ 0
CAPN1-218ENST00000530442 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
CAPN1-218ENST00000530442 CHRNA2Q15822 529 aa15.06■□□□□ 0
CAPN1-218ENST00000530442 RGS17Q9UGC6 210 aaPredicted RBP15.06■□□□□ 0
CAPN1-218ENST00000530442 ARHGEF25Q86VW2 580 aa15.05■□□□□ -0
CAPN1-218ENST00000530442 FNBP4Q8N3X1 1017 aaPredicted RBP15.05■□□□□ -0
CAPN1-218ENST00000530442 NGLY1Q96IV0 654 aa15.05■□□□□ -0
CAPN1-218ENST00000530442 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
CAPN1-218ENST00000530442 NPC1L1Q9UHC9 1359 aa15.05■□□□□ -0
CAPN1-218ENST00000530442 COL5A2P05997 1499 aaPredicted RBP15.04■□□□□ -0
CAPN1-218ENST00000530442 AATKQ6ZMQ8 1374 aa15.04■□□□□ -0
CAPN1-218ENST00000530442 FBLN1P23142 703 aa15.04■□□□□ -0
CAPN1-218ENST00000530442 ATRNO75882 1429 aa15.03■□□□□ -0
CAPN1-218ENST00000530442 WNK3Q9BYP7 1800 aa15.03■□□□□ -0
CAPN1-218ENST00000530442 FAM208AQ9UK61 1670 aaKnown RBP15.03■□□□□ -0
CAPN1-218ENST00000530442 GLI3P10071 1580 aa15.02■□□□□ -0
CAPN1-218ENST00000530442 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
CAPN1-218ENST00000530442 MAP3K19Q56UN5 1328 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms