RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 NGDNQ8NEJ9 315 aaKnown RBP30.28■■■□□ 2.44
TSPAN4-219ENST00000530404 PHRF1Q9P1Y6 1649 aaKnown RBP30.28■■■□□ 2.44
TSPAN4-219ENST00000530404 PAK3O75914 559 aaPredicted RBP30.26■■■□□ 2.43
TSPAN4-219ENST00000530404 BLMP54132 1417 aaPredicted RBP30.25■■■□□ 2.43
TSPAN4-219ENST00000530404 BTG4Q9NY30 223 aa30.25■■■□□ 2.43
TSPAN4-219ENST00000530404 ZRANB1Q9UGI0 708 aa30.24■■■□□ 2.43
TSPAN4-219ENST00000530404 A0A0G2JS52 829 aa30.22■■■□□ 2.43
TSPAN4-219ENST00000530404 MYT1Q01538 1121 aa30.22■■■□□ 2.43
TSPAN4-219ENST00000530404 NUDT16Q96DE0 195 aaKnown RBP30.22■■■□□ 2.43
TSPAN4-219ENST00000530404 DEFB132Q7Z7B7 95 aa30.21■■■□□ 2.43
TSPAN4-219ENST00000530404 ONECUT3O60422 494 aaPredicted RBP30.2■■■□□ 2.43
TSPAN4-219ENST00000530404 FAM98CQ17RN3 349 aaKnown RBP30.19■■■□□ 2.42
TSPAN4-219ENST00000530404 KRT27Q7Z3Y8 459 aa30.19■■■□□ 2.42
TSPAN4-219ENST00000530404 CDK19Q9BWU1 502 aa30.19■■■□□ 2.42
TSPAN4-219ENST00000530404 NBPF1Q3BBV0 1214 aa30.16■■■□□ 2.42
TSPAN4-219ENST00000530404 QRICH2Q9H0J4 1663 aa30.16■■■□□ 2.42
TSPAN4-219ENST00000530404 SF3B2Q13435 895 aaKnown RBP30.14■■■□□ 2.42
TSPAN4-219ENST00000530404 NUTM2GQ5VZR2 741 aa30.14■■■□□ 2.42
TSPAN4-219ENST00000530404 THSD7AQ9UPZ6 1657 aa30.14■■■□□ 2.41
TSPAN4-219ENST00000530404 PRDM11Q9NQV5 511 aa30.12■■■□□ 2.41
TSPAN4-219ENST00000530404 RGPD1P0DJD0 1748 aa30.12■■■□□ 2.41
TSPAN4-219ENST00000530404 ACEP12821 1306 aa30.11■■■□□ 2.41
TSPAN4-219ENST00000530404 KIAA0232Q92628 1395 aa30.11■■■□□ 2.41
TSPAN4-219ENST00000530404 CHRNA2Q15822 529 aa30.1■■■□□ 2.41
TSPAN4-219ENST00000530404 SPATA31A5Q5VU36 1347 aa30.1■■■□□ 2.41
TSPAN4-219ENST00000530404 SPATA31A7Q8IWB4 1347 aa30.1■■■□□ 2.41
TSPAN4-219ENST00000530404 POLR3AO14802 1390 aaPredicted RBP30.09■■■□□ 2.41
TSPAN4-219ENST00000530404 NRKQ7Z2Y5 1582 aa30.09■■■□□ 2.41
TSPAN4-219ENST00000530404 FAM182BQ5T319 152 aa30.08■■■□□ 2.41
TSPAN4-219ENST00000530404 ZC3H6P61129 1189 aaKnown RBP30.07■■■□□ 2.4
TSPAN4-219ENST00000530404 TNS1Q9HBL0 1735 aaKnown RBP30.07■■■□□ 2.4
TSPAN4-219ENST00000530404 NBPF8Q3BBV2 869 aa30.06■■■□□ 2.4
TSPAN4-219ENST00000530404 CCDC61Q9Y6R9 512 aa30.06■■■□□ 2.4
TSPAN4-219ENST00000530404 STRN4Q9NRL3 753 aa30.04■■■□□ 2.4
TSPAN4-219ENST00000530404 PLEKHG3A1L390 1219 aa30.02■■■□□ 2.4
TSPAN4-219ENST00000530404 PPIP5K1Q6PFW1 1433 aa30.02■■■□□ 2.4
TSPAN4-219ENST00000530404 CENPJQ9HC77 1338 aaPredicted RBP30.01■■■□□ 2.4
TSPAN4-219ENST00000530404 TRPM1Q7Z4N2 1603 aa30.01■■■□□ 2.39
TSPAN4-219ENST00000530404 SRPK2P78362 688 aaKnown RBP30.01■■■□□ 2.39
TSPAN4-219ENST00000530404 CABP2Q9NPB3 220 aa30■■■□□ 2.39
TSPAN4-219ENST00000530404 LMO7Q8WWI1 1683 aa30■■■□□ 2.39
TSPAN4-219ENST00000530404 SPATA31A1Q5TZJ5 1347 aa29.99■■■□□ 2.39
TSPAN4-219ENST00000530404 ABTB2Q8N961 1025 aa29.99■■■□□ 2.39
TSPAN4-219ENST00000530404 BAG6P46379 1132 aa29.98■■■□□ 2.39
TSPAN4-219ENST00000530404 CAMTA1Q9Y6Y1 1673 aa29.98■■■□□ 2.39
TSPAN4-219ENST00000530404 USP35Q9P2H5 1018 aa29.96■■■□□ 2.39
TSPAN4-219ENST00000530404 L3MBTL2Q969R5 705 aa29.95■■■□□ 2.39
TSPAN4-219ENST00000530404 EN1Q05925 392 aaPredicted RBP29.94■■■□□ 2.38
TSPAN4-219ENST00000530404 SIN3AQ96ST3 1273 aa29.94■■■□□ 2.38
TSPAN4-219ENST00000530404 SSH2Q76I76 1423 aa29.94■■■□□ 2.38
TSPAN4-219ENST00000530404 PSDA5PKW4 1024 aaPredicted RBP29.93■■■□□ 2.38
TSPAN4-219ENST00000530404 EVA1CP58658 441 aa29.92■■■□□ 2.38
TSPAN4-219ENST00000530404 LRP5O75197 1615 aa29.92■■■□□ 2.38
TSPAN4-219ENST00000530404 USP19O94966 1318 aa29.92■■■□□ 2.38
TSPAN4-219ENST00000530404 AKAP12Q02952 1782 aa29.9■■■□□ 2.38
TSPAN4-219ENST00000530404 PIK3C2AO00443 1686 aa29.9■■■□□ 2.38
TSPAN4-219ENST00000530404 LARP1Q6PKG0 1096 aaKnown RBP29.89■■■□□ 2.38
TSPAN4-219ENST00000530404 RGPD5Q99666 1765 aa29.89■■■□□ 2.38
TSPAN4-219ENST00000530404 CABP1Q9NZU7 370 aa29.88■■■□□ 2.37
TSPAN4-219ENST00000530404 CPDO75976 1380 aa29.88■■■□□ 2.37
TSPAN4-219ENST00000530404 NLRP13Q86W25 1043 aa29.87■■■□□ 2.37
TSPAN4-219ENST00000530404 USP6P35125 1406 aa29.87■■■□□ 2.37
TSPAN4-219ENST00000530404 NEUROD1Q13562 356 aa29.86■■■□□ 2.37
TSPAN4-219ENST00000530404 PARP4Q9UKK3 1724 aaKnown RBP29.85■■■□□ 2.37
TSPAN4-219ENST00000530404 ZBTB7CA1YPR0 619 aa29.85■■■□□ 2.37
TSPAN4-219ENST00000530404 TRIM37O94972 964 aa29.85■■■□□ 2.37
TSPAN4-219ENST00000530404 GCP02774 474 aa29.85■■■□□ 2.37
TSPAN4-219ENST00000530404 WNK3Q9BYP7 1800 aa29.83■■■□□ 2.37
TSPAN4-219ENST00000530404 COL18A1P39060 1754 aa29.83■■■□□ 2.37
TSPAN4-219ENST00000530404 COL5A2P05997 1499 aaPredicted RBP29.83■■■□□ 2.37
TSPAN4-219ENST00000530404 DISP2A7MBM2 1401 aa29.83■■■□□ 2.37
TSPAN4-219ENST00000530404 EZH2Q15910 746 aaKnown RBP29.83■■■□□ 2.37
TSPAN4-219ENST00000530404 SLIT3O75094 1523 aa29.82■■■□□ 2.36
TSPAN4-219ENST00000530404 BARGINQ6ZT62 677 aa29.82■■■□□ 2.36
TSPAN4-219ENST00000530404 RREB1Q92766 1687 aa29.82■■■□□ 2.36
TSPAN4-219ENST00000530404 FAM196AQ6ZSG2 479 aa29.81■■■□□ 2.36
TSPAN4-219ENST00000530404 ROCK2O75116 1388 aaKnown RBP29.8■■■□□ 2.36
TSPAN4-219ENST00000530404 NLRP6P59044 892 aa29.8■■■□□ 2.36
TSPAN4-219ENST00000530404 TCP11L2Q8N4U5 519 aa29.8■■■□□ 2.36
TSPAN4-219ENST00000530404 SBF2Q86WG5 1849 aa29.8■■■□□ 2.36
TSPAN4-219ENST00000530404 NUP188Q5SRE5 1749 aa29.79■■■□□ 2.36
TSPAN4-219ENST00000530404 BRD4O60885 1362 aaPredicted RBP29.79■■■□□ 2.36
TSPAN4-219ENST00000530404 EVC2Q86UK5 1308 aa29.79■■■□□ 2.36
TSPAN4-219ENST00000530404 PDE3BQ13370 1112 aa29.78■■■□□ 2.36
TSPAN4-219ENST00000530404 R3HDM1Q15032 1099 aaKnown RBP29.77■■■□□ 2.36
TSPAN4-219ENST00000530404 LRRC37A3O60309 1634 aa29.75■■■□□ 2.35
TSPAN4-219ENST00000530404 APBA3O96018 575 aa29.75■■■□□ 2.35
TSPAN4-219ENST00000530404 CAMKK2Q96RR4 588 aa29.74■■■□□ 2.35
TSPAN4-219ENST00000530404 MON2Q7Z3U7 1717 aa29.74■■■□□ 2.35
TSPAN4-219ENST00000530404 CRB1P82279 1406 aa29.73■■■□□ 2.35
TSPAN4-219ENST00000530404 PEAK1Q9H792 1746 aa29.72■■■□□ 2.35
TSPAN4-219ENST00000530404 THRAP3Q9Y2W1 955 aaKnown RBP29.71■■■□□ 2.35
TSPAN4-219ENST00000530404 AATKQ6ZMQ8 1374 aa29.7■■■□□ 2.35
TSPAN4-219ENST00000530404 SOX12O15370 315 aa29.68■■■□□ 2.34
TSPAN4-219ENST00000530404 TTC21BQ7Z4L5 1316 aa29.68■■■□□ 2.34
TSPAN4-219ENST00000530404 CPSF1Q10570 1443 aaKnown RBP29.66■■■□□ 2.34
TSPAN4-219ENST00000530404 AXIN2Q9Y2T1 843 aa29.66■■■□□ 2.34
TSPAN4-219ENST00000530404 TOM1L2Q6ZVM7 507 aa29.65■■■□□ 2.34
TSPAN4-219ENST00000530404 LTN1O94822 1766 aa29.64■■■□□ 2.34
TSPAN4-219ENST00000530404 PARD3Q8TEW0 1356 aa29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms