RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 ARID3AQ99856 593 aa11.55□□□□□ -0.56
VPS26B-205ENST00000530402 GGCXP38435 758 aa11.54□□□□□ -0.56
VPS26B-205ENST00000530402 ARMC2Q8NEN0 867 aa11.54□□□□□ -0.56
VPS26B-205ENST00000530402 FCF1Q9Y324 198 aaKnown RBP11.54□□□□□ -0.56
VPS26B-205ENST00000530402 VAC14Q08AM6 782 aa11.53□□□□□ -0.56
VPS26B-205ENST00000530402 UNC93B1Q9H1C4 597 aa11.52□□□□□ -0.57
VPS26B-205ENST00000530402 C1orf115Q9H7X2 142 aa11.52□□□□□ -0.57
VPS26B-205ENST00000530402 POM121CA8CG34 1229 aa11.51□□□□□ -0.57
VPS26B-205ENST00000530402 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
VPS26B-205ENST00000530402 GPR37L1O60883 481 aa11.51□□□□□ -0.57
VPS26B-205ENST00000530402 NBPF14Q5TI25 921 aa11.5□□□□□ -0.57
VPS26B-205ENST00000530402 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
VPS26B-205ENST00000530402 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
VPS26B-205ENST00000530402 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
VPS26B-205ENST00000530402 CCDC97Q96F63 343 aaPredicted RBP11.48□□□□□ -0.57
VPS26B-205ENST00000530402 ZBBXA8MT70 800 aa11.47□□□□□ -0.57
VPS26B-205ENST00000530402 RNF223E7ERA6 249 aa11.47□□□□□ -0.57
VPS26B-205ENST00000530402 ZBTB24O43167 697 aaPredicted RBP11.47□□□□□ -0.57
VPS26B-205ENST00000530402 PTK2Q05397 1052 aa11.47□□□□□ -0.57
VPS26B-205ENST00000530402 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
VPS26B-205ENST00000530402 GPKOWQ92917 476 aaPredicted RBP eCLIP11.47□□□□□ -0.57
VPS26B-205ENST00000530402 GLMNQ92990 594 aa11.47□□□□□ -0.57
VPS26B-205ENST00000530402 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
VPS26B-205ENST00000530402 NR1H3Q13133 447 aa11.46□□□□□ -0.57
VPS26B-205ENST00000530402 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
VPS26B-205ENST00000530402 FBXO45P0C2W1 286 aa11.45□□□□□ -0.58
VPS26B-205ENST00000530402 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS26B-205ENST00000530402 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
VPS26B-205ENST00000530402 HDGFL1Q5TGJ6 251 aa11.45□□□□□ -0.58
VPS26B-205ENST00000530402 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
VPS26B-205ENST00000530402 AGERQ15109 404 aa11.44□□□□□ -0.58
VPS26B-205ENST00000530402 LINC01559Q495D7 138 aa11.44□□□□□ -0.58
VPS26B-205ENST00000530402 ANKLE1Q8NAG6 615 aa11.44□□□□□ -0.58
VPS26B-205ENST00000530402 BAP1Q92560 729 aa11.44□□□□□ -0.58
VPS26B-205ENST00000530402 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
VPS26B-205ENST00000530402 ARHGAP9Q9BRR9 750 aa11.43□□□□□ -0.58
VPS26B-205ENST00000530402 SERPINA10Q9UK55 444 aa11.43□□□□□ -0.58
VPS26B-205ENST00000530402 SOX11P35716 441 aa11.42□□□□□ -0.58
VPS26B-205ENST00000530402 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
VPS26B-205ENST00000530402 ZBTB33Q86T24 672 aa11.41□□□□□ -0.58
VPS26B-205ENST00000530402 MAGEB6P1A0A0J9YX57 407 aa11.4□□□□□ -0.58
VPS26B-205ENST00000530402 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
VPS26B-205ENST00000530402 ZNF511Q8NB15 262 aa11.39□□□□□ -0.59
VPS26B-205ENST00000530402 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
VPS26B-205ENST00000530402 ADAMTS19Q8TE59 1207 aa11.38□□□□□ -0.59
VPS26B-205ENST00000530402 ALG2Q9H553 416 aa11.38□□□□□ -0.59
VPS26B-205ENST00000530402 PCDHB9Q9Y5E1 797 aa11.38□□□□□ -0.59
VPS26B-205ENST00000530402 TRIM32Q13049 653 aa11.37□□□□□ -0.59
VPS26B-205ENST00000530402 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
VPS26B-205ENST00000530402 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
VPS26B-205ENST00000530402 ZNF592Q92610 1267 aa11.37□□□□□ -0.59
VPS26B-205ENST00000530402 FOXJ1Q92949 421 aa11.37□□□□□ -0.59
VPS26B-205ENST00000530402 SH3BP5LQ7L8J4 393 aa11.36□□□□□ -0.59
VPS26B-205ENST00000530402 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
VPS26B-205ENST00000530402 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
VPS26B-205ENST00000530402 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
VPS26B-205ENST00000530402 SH3BP2P78314 561 aa11.34□□□□□ -0.59
VPS26B-205ENST00000530402 OCSTAMPQ9BR26 566 aa11.34□□□□□ -0.59
VPS26B-205ENST00000530402 RPIAP49247 311 aa11.33□□□□□ -0.6
VPS26B-205ENST00000530402 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
VPS26B-205ENST00000530402 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
VPS26B-205ENST00000530402 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
VPS26B-205ENST00000530402 ARXQ96QS3 562 aa11.32□□□□□ -0.6
VPS26B-205ENST00000530402 WNT7BP56706 349 aa11.3□□□□□ -0.6
VPS26B-205ENST00000530402 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
VPS26B-205ENST00000530402 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
VPS26B-205ENST00000530402 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
VPS26B-205ENST00000530402 C4orf48Q5BLP8 95 aa11.29□□□□□ -0.6
VPS26B-205ENST00000530402 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
VPS26B-205ENST00000530402 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
VPS26B-205ENST00000530402 RFX1P22670 979 aa11.28□□□□□ -0.6
VPS26B-205ENST00000530402 SLC19A1P41440 591 aa11.28□□□□□ -0.6
VPS26B-205ENST00000530402 HOMEZQ8IX15 550 aa11.28□□□□□ -0.6
VPS26B-205ENST00000530402 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
VPS26B-205ENST00000530402 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
VPS26B-205ENST00000530402 TFIP11Q9UBB9 837 aaKnown RBP11.28□□□□□ -0.6
VPS26B-205ENST00000530402 PALM3A6NDB9 673 aaPredicted RBP11.27□□□□□ -0.61
VPS26B-205ENST00000530402 SKOR1P84550 965 aa11.27□□□□□ -0.61
VPS26B-205ENST00000530402 UCN2Q96RP3 112 aa11.27□□□□□ -0.61
VPS26B-205ENST00000530402 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
VPS26B-205ENST00000530402 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
VPS26B-205ENST00000530402 FAM174AQ8TBP5 190 aa11.26□□□□□ -0.61
VPS26B-205ENST00000530402 A0A0G2JS52 829 aa11.25□□□□□ -0.61
VPS26B-205ENST00000530402 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
VPS26B-205ENST00000530402 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
VPS26B-205ENST00000530402 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
VPS26B-205ENST00000530402 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
VPS26B-205ENST00000530402 SKIP12755 728 aa11.24□□□□□ -0.61
VPS26B-205ENST00000530402 NBPF20Q3BBV1 942 aa11.24□□□□□ -0.61
VPS26B-205ENST00000530402 ATP9BO43861 1147 aa11.23□□□□□ -0.61
VPS26B-205ENST00000530402 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
VPS26B-205ENST00000530402 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
VPS26B-205ENST00000530402 CDV3Q9UKY7 258 aaKnown RBP11.23□□□□□ -0.61
VPS26B-205ENST00000530402 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
VPS26B-205ENST00000530402 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
VPS26B-205ENST00000530402 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.61
VPS26B-205ENST00000530402 VASH1Q7L8A9 365 aaPredicted RBP11.21□□□□□ -0.61
VPS26B-205ENST00000530402 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
VPS26B-205ENST00000530402 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
VPS26B-205ENST00000530402 MAFBQ9Y5Q3 323 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms