RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CCDC9Q9Y3X0 531 aaKnown RBP30.18■■■□□ 2.42
SMPD1-204ENST00000530395 FAM83GA6ND36 823 aa30.17■■■□□ 2.42
SMPD1-204ENST00000530395 CCDC125Q86Z20 511 aa30.15■■■□□ 2.42
SMPD1-204ENST00000530395 QRICH2Q9H0J4 1663 aa30.14■■■□□ 2.41
SMPD1-204ENST00000530395 CCDC61Q9Y6R9 512 aa30.13■■■□□ 2.41
SMPD1-204ENST00000530395 CENPJQ9HC77 1338 aaPredicted RBP30.12■■■□□ 2.41
SMPD1-204ENST00000530395 POLR3AO14802 1390 aaPredicted RBP30.12■■■□□ 2.41
SMPD1-204ENST00000530395 PHRF1Q9P1Y6 1649 aaKnown RBP30.11■■■□□ 2.41
SMPD1-204ENST00000530395 SEPT12Q8IYM1 358 aa30.11■■■□□ 2.41
SMPD1-204ENST00000530395 BTG4Q9NY30 223 aa30.11■■■□□ 2.41
SMPD1-204ENST00000530395 L3MBTL2Q969R5 705 aa30.1■■■□□ 2.41
SMPD1-204ENST00000530395 ACEP12821 1306 aa30.09■■■□□ 2.41
SMPD1-204ENST00000530395 TRPM1Q7Z4N2 1603 aa30.07■■■□□ 2.4
SMPD1-204ENST00000530395 PLEKHG3A1L390 1219 aa30.07■■■□□ 2.4
SMPD1-204ENST00000530395 ONECUT3O60422 494 aaPredicted RBP30.07■■■□□ 2.4
SMPD1-204ENST00000530395 SRPK2P78362 688 aaKnown RBP30.07■■■□□ 2.4
SMPD1-204ENST00000530395 NBPF8Q3BBV2 869 aa30.06■■■□□ 2.4
SMPD1-204ENST00000530395 PRDM11Q9NQV5 511 aa30.06■■■□□ 2.4
SMPD1-204ENST00000530395 BLMP54132 1417 aaPredicted RBP30.05■■■□□ 2.4
SMPD1-204ENST00000530395 A0A0G2JS52 829 aa30.04■■■□□ 2.4
SMPD1-204ENST00000530395 MYT1Q01538 1121 aa30.04■■■□□ 2.4
SMPD1-204ENST00000530395 SIN3AQ96ST3 1273 aa30.04■■■□□ 2.4
SMPD1-204ENST00000530395 PPIP5K1Q6PFW1 1433 aa30.04■■■□□ 2.4
SMPD1-204ENST00000530395 KRT27Q7Z3Y8 459 aa30.02■■■□□ 2.4
SMPD1-204ENST00000530395 NEUROD1Q13562 356 aa30.01■■■□□ 2.39
SMPD1-204ENST00000530395 KIAA0232Q92628 1395 aa30.01■■■□□ 2.39
SMPD1-204ENST00000530395 FAM98CQ17RN3 349 aaKnown RBP30■■■□□ 2.39
SMPD1-204ENST00000530395 NUTM2GQ5VZR2 741 aa29.99■■■□□ 2.39
SMPD1-204ENST00000530395 CABP2Q9NPB3 220 aa29.99■■■□□ 2.39
SMPD1-204ENST00000530395 SF3B2Q13435 895 aaKnown RBP29.98■■■□□ 2.39
SMPD1-204ENST00000530395 NRKQ7Z2Y5 1582 aa29.98■■■□□ 2.39
SMPD1-204ENST00000530395 SPATA31A5Q5VU36 1347 aa29.97■■■□□ 2.39
SMPD1-204ENST00000530395 SPATA31A7Q8IWB4 1347 aa29.97■■■□□ 2.39
SMPD1-204ENST00000530395 ABTB2Q8N961 1025 aa29.97■■■□□ 2.39
SMPD1-204ENST00000530395 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
SMPD1-204ENST00000530395 ROCK2O75116 1388 aaKnown RBP29.97■■■□□ 2.39
SMPD1-204ENST00000530395 BRD4O60885 1362 aaPredicted RBP29.95■■■□□ 2.39
SMPD1-204ENST00000530395 ZC3H6P61129 1189 aaKnown RBP29.94■■■□□ 2.38
SMPD1-204ENST00000530395 THSD7AQ9UPZ6 1657 aa29.93■■■□□ 2.38
SMPD1-204ENST00000530395 CHRNA2Q15822 529 aa29.93■■■□□ 2.38
SMPD1-204ENST00000530395 EVC2Q86UK5 1308 aa29.93■■■□□ 2.38
SMPD1-204ENST00000530395 SRCAPQ6ZRS2 3230 aa29.92■■■□□ 2.38
SMPD1-204ENST00000530395 USP19O94966 1318 aa29.91■■■□□ 2.38
SMPD1-204ENST00000530395 NLRP13Q86W25 1043 aa29.9■■■□□ 2.38
SMPD1-204ENST00000530395 STRN4Q9NRL3 753 aa29.9■■■□□ 2.38
SMPD1-204ENST00000530395 CABP1Q9NZU7 370 aa29.89■■■□□ 2.38
SMPD1-204ENST00000530395 CPDO75976 1380 aa29.89■■■□□ 2.37
SMPD1-204ENST00000530395 USP6P35125 1406 aa29.88■■■□□ 2.37
SMPD1-204ENST00000530395 SPATA31A1Q5TZJ5 1347 aa29.88■■■□□ 2.37
SMPD1-204ENST00000530395 RGPD1P0DJD0 1748 aa29.87■■■□□ 2.37
SMPD1-204ENST00000530395 LMO7Q8WWI1 1683 aa29.86■■■□□ 2.37
SMPD1-204ENST00000530395 DEFB132Q7Z7B7 95 aa29.86■■■□□ 2.37
SMPD1-204ENST00000530395 EVA1CP58658 441 aa29.85■■■□□ 2.37
SMPD1-204ENST00000530395 SSH2Q76I76 1423 aa29.84■■■□□ 2.37
SMPD1-204ENST00000530395 CAMTA1Q9Y6Y1 1673 aa29.83■■■□□ 2.37
SMPD1-204ENST00000530395 AKAP12Q02952 1782 aa29.82■■■□□ 2.36
SMPD1-204ENST00000530395 GCP02774 474 aa29.82■■■□□ 2.36
SMPD1-204ENST00000530395 BAG6P46379 1132 aa29.81■■■□□ 2.36
SMPD1-204ENST00000530395 PIK3C2AO00443 1686 aa29.81■■■□□ 2.36
SMPD1-204ENST00000530395 SLIT3O75094 1523 aa29.8■■■□□ 2.36
SMPD1-204ENST00000530395 NLRP6P59044 892 aa29.79■■■□□ 2.36
SMPD1-204ENST00000530395 TONSLQ96HA7 1378 aa29.78■■■□□ 2.36
SMPD1-204ENST00000530395 USP35Q9P2H5 1018 aa29.78■■■□□ 2.36
SMPD1-204ENST00000530395 FAM182BQ5T319 152 aa29.76■■■□□ 2.35
SMPD1-204ENST00000530395 ZNF692Q9BU19 519 aaPredicted RBP29.76■■■□□ 2.35
SMPD1-204ENST00000530395 LARP1Q6PKG0 1096 aaKnown RBP29.75■■■□□ 2.35
SMPD1-204ENST00000530395 BARGINQ6ZT62 677 aa29.75■■■□□ 2.35
SMPD1-204ENST00000530395 TNS1Q9HBL0 1735 aaKnown RBP29.75■■■□□ 2.35
SMPD1-204ENST00000530395 SBNO2Q9Y2G9 1366 aa29.75■■■□□ 2.35
SMPD1-204ENST00000530395 COL5A2P05997 1499 aaPredicted RBP29.74■■■□□ 2.35
SMPD1-204ENST00000530395 CARD11Q9BXL7 1154 aa29.74■■■□□ 2.35
SMPD1-204ENST00000530395 ZBTB7CA1YPR0 619 aa29.73■■■□□ 2.35
SMPD1-204ENST00000530395 TCP11L2Q8N4U5 519 aa29.73■■■□□ 2.35
SMPD1-204ENST00000530395 THRAP3Q9Y2W1 955 aaKnown RBP29.71■■■□□ 2.35
SMPD1-204ENST00000530395 MON2Q7Z3U7 1717 aa29.71■■■□□ 2.35
SMPD1-204ENST00000530395 TTC21BQ7Z4L5 1316 aa29.71■■■□□ 2.35
SMPD1-204ENST00000530395 AATKQ6ZMQ8 1374 aa29.7■■■□□ 2.35
SMPD1-204ENST00000530395 FAM196AQ6ZSG2 479 aa29.7■■■□□ 2.35
SMPD1-204ENST00000530395 TTC21AQ8NDW8 1320 aa29.7■■■□□ 2.34
SMPD1-204ENST00000530395 PDE3BQ13370 1112 aa29.69■■■□□ 2.34
SMPD1-204ENST00000530395 CRB1P82279 1406 aa29.69■■■□□ 2.34
SMPD1-204ENST00000530395 PARP4Q9UKK3 1724 aaKnown RBP29.68■■■□□ 2.34
SMPD1-204ENST00000530395 KTN1Q86UP2 1357 aaKnown RBP29.68■■■□□ 2.34
SMPD1-204ENST00000530395 DISP2A7MBM2 1401 aa29.68■■■□□ 2.34
SMPD1-204ENST00000530395 CPSF1Q10570 1443 aaKnown RBP29.68■■■□□ 2.34
SMPD1-204ENST00000530395 COL18A1P39060 1754 aa29.67■■■□□ 2.34
SMPD1-204ENST00000530395 EN1Q05925 392 aaPredicted RBP29.66■■■□□ 2.34
SMPD1-204ENST00000530395 KCNH5Q8NCM2 988 aa29.66■■■□□ 2.34
SMPD1-204ENST00000530395 TRIM26Q12899 539 aaPredicted RBP29.63■■■□□ 2.33
SMPD1-204ENST00000530395 TRIM37O94972 964 aa29.62■■■□□ 2.33
SMPD1-204ENST00000530395 WNK3Q9BYP7 1800 aa29.61■■■□□ 2.33
SMPD1-204ENST00000530395 RGPD5Q99666 1765 aa29.6■■■□□ 2.33
SMPD1-204ENST00000530395 TOM1L2Q6ZVM7 507 aa29.59■■■□□ 2.33
SMPD1-204ENST00000530395 SOX12O15370 315 aa29.58■■■□□ 2.33
SMPD1-204ENST00000530395 NFAT5O94916 1531 aa29.58■■■□□ 2.33
SMPD1-204ENST00000530395 USP54Q70EL1 1684 aa29.58■■■□□ 2.33
SMPD1-204ENST00000530395 ARHGEF25Q86VW2 580 aa29.58■■■□□ 2.33
SMPD1-204ENST00000530395 TMC1Q8TDI8 760 aa29.58■■■□□ 2.33
SMPD1-204ENST00000530395 LRRC37A3O60309 1634 aa29.57■■■□□ 2.32
SMPD1-204ENST00000530395 LRP5O75197 1615 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms