RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 TRIM34Q9BYJ4 488 aa18.57■□□□□ 0.56
PCDHA4-203ENST00000530339 CNTROBQ8N137 903 aa18.56■□□□□ 0.56
PCDHA4-203ENST00000530339 PKNOX2Q96KN3 472 aa18.56■□□□□ 0.56
PCDHA4-203ENST00000530339 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
PCDHA4-203ENST00000530339 RRP9O43818 475 aaKnown RBP18.55■□□□□ 0.56
PCDHA4-203ENST00000530339 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
PCDHA4-203ENST00000530339 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
PCDHA4-203ENST00000530339 MVPQ14764 893 aaKnown RBP18.54■□□□□ 0.56
PCDHA4-203ENST00000530339 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
PCDHA4-203ENST00000530339 NAT10Q9H0A0 1025 aaKnown RBP18.54■□□□□ 0.56
PCDHA4-203ENST00000530339 CTDP1Q9Y5B0 961 aaPredicted RBP18.54■□□□□ 0.56
PCDHA4-203ENST00000530339 CUL7Q14999 1698 aa18.54■□□□□ 0.56
PCDHA4-203ENST00000530339 ERC1Q8IUD2 1116 aa18.54■□□□□ 0.56
PCDHA4-203ENST00000530339 RBM10P98175 930 aaKnown RBP18.53■□□□□ 0.56
PCDHA4-203ENST00000530339 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
PCDHA4-203ENST00000530339 TRIM5Q9C035 493 aa18.53■□□□□ 0.56
PCDHA4-203ENST00000530339 ERICH2A1L162 156 aa18.53■□□□□ 0.56
PCDHA4-203ENST00000530339 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
PCDHA4-203ENST00000530339 SAFBQ15424 915 aaKnown RBP eCLIP18.52■□□□□ 0.56
PCDHA4-203ENST00000530339 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
PCDHA4-203ENST00000530339 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.56
PCDHA4-203ENST00000530339 PDCP20941 246 aa18.52■□□□□ 0.55
PCDHA4-203ENST00000530339 ATF7IPQ6VMQ6 1270 aa18.52■□□□□ 0.55
PCDHA4-203ENST00000530339 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.55
PCDHA4-203ENST00000530339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
PCDHA4-203ENST00000530339 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
PCDHA4-203ENST00000530339 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
PCDHA4-203ENST00000530339 CLASRPQ8N2M8 674 aaKnown RBP18.51■□□□□ 0.55
PCDHA4-203ENST00000530339 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
PCDHA4-203ENST00000530339 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 ACBD3Q9H3P7 528 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 GPRASP1Q5JY77 1395 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 NAIPQ13075 1403 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 EPRSP07814 1512 aaKnown RBP18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 SDF4Q9BRK5 362 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 SLFN5Q08AF3 891 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
PCDHA4-203ENST00000530339 DHX8Q14562 1220 aaKnown RBP18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 FBXW7Q969H0 707 aa18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 CCDC27Q2M243 656 aa18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 RALYLQ86SE5 291 aaKnown RBP18.49■□□□□ 0.55
PCDHA4-203ENST00000530339 AFAP1Q8N556 730 aa18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 CHD1LQ86WJ1 897 aa18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 FIBPO43427 364 aa18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 APPP05067 770 aa18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 HSP90B2PQ58FF3 399 aa18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
PCDHA4-203ENST00000530339 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
PCDHA4-203ENST00000530339 GNAI2P04899 355 aa18.47■□□□□ 0.55
PCDHA4-203ENST00000530339 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
PCDHA4-203ENST00000530339 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
PCDHA4-203ENST00000530339 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
PCDHA4-203ENST00000530339 ZSCAN30Q86W11 494 aa18.46■□□□□ 0.55
PCDHA4-203ENST00000530339 TCEAL9Q9UHQ7 104 aa18.46■□□□□ 0.55
PCDHA4-203ENST00000530339 NFXL1Q6ZNB6 911 aa18.46■□□□□ 0.55
PCDHA4-203ENST00000530339 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
PCDHA4-203ENST00000530339 IQGAP2Q13576 1575 aa18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 NLRP6P59044 892 aa18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 XBP1P17861 261 aa18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 PCMTD1Q96MG8 357 aaPredicted RBP18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 KINO60870 393 aaKnown RBP18.45■□□□□ 0.54
PCDHA4-203ENST00000530339 UQCRHLA0A096LP55 91 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 UQCRHP07919 91 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 CCDC192P0DO97 292 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 VPS37DQ86XT2 251 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 PRM3Q9NNZ6 103 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 BRMS1Q9HCU9 246 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 FOSBP53539 338 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 OLFM4Q6UX06 510 aa18.44■□□□□ 0.54
PCDHA4-203ENST00000530339 C11orf95C9JLR9 678 aaPredicted RBP18.43■□□□□ 0.54
PCDHA4-203ENST00000530339 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
PCDHA4-203ENST00000530339 DHX16O60231 1041 aaKnown RBP18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 HMGB2P26583 209 aaKnown RBP18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 CWC15Q9P013 229 aaKnown RBP18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 PRAM1Q96QH2 718 aa18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 FSD1Q9BTV5 496 aa18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 CCP110O43303 1012 aa18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
PCDHA4-203ENST00000530339 ANKRD1Q15327 319 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 PDE4CQ08493 712 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 SPC24Q8NBT2 197 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 FCHSD2O94868 740 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 AK7Q96M32 723 aa18.41■□□□□ 0.54
PCDHA4-203ENST00000530339 PRKCSHP14314 528 aaPredicted RBP18.4■□□□□ 0.54
PCDHA4-203ENST00000530339 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
PCDHA4-203ENST00000530339 RUFY1Q96T51 708 aa18.4■□□□□ 0.54
PCDHA4-203ENST00000530339 SART3Q15020 963 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms