RNA–Protein interactions for RNA: ENST00000530335.1

ME3-208, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-208ENST00000530335 SRPK2P78362 688 aaKnown RBP29.84■■■□□ 2.37
ME3-208ENST00000530335 ACEP12821 1306 aa29.82■■■□□ 2.36
ME3-208ENST00000530335 PLEKHG5O94827 1062 aa29.82■■■□□ 2.36
ME3-208ENST00000530335 RALGAPBQ86X10 1494 aa29.81■■■□□ 2.36
ME3-208ENST00000530335 PPIP5K1Q6PFW1 1433 aa29.81■■■□□ 2.36
ME3-208ENST00000530335 PAK3O75914 559 aaPredicted RBP29.81■■■□□ 2.36
ME3-208ENST00000530335 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
ME3-208ENST00000530335 UNC5CLQ8IV45 518 aa29.8■■■□□ 2.36
ME3-208ENST00000530335 CABP2Q9NPB3 220 aa29.8■■■□□ 2.36
ME3-208ENST00000530335 PHRF1Q9P1Y6 1649 aaKnown RBP29.78■■■□□ 2.36
ME3-208ENST00000530335 COL14A1Q05707 1796 aaKnown RBP29.77■■■□□ 2.36
ME3-208ENST00000530335 EVC2Q86UK5 1308 aa29.77■■■□□ 2.36
ME3-208ENST00000530335 GLI3P10071 1580 aa29.76■■■□□ 2.35
ME3-208ENST00000530335 NRAPQ86VF7 1730 aa29.76■■■□□ 2.35
ME3-208ENST00000530335 GJD4Q96KN9 370 aaPredicted RBP29.75■■■□□ 2.35
ME3-208ENST00000530335 UPF1Q92900 1129 aaKnown RBP eCLIP29.73■■■□□ 2.35
ME3-208ENST00000530335 FAM83GA6ND36 823 aa29.72■■■□□ 2.35
ME3-208ENST00000530335 CARD11Q9BXL7 1154 aa29.72■■■□□ 2.35
ME3-208ENST00000530335 SBNO2Q9Y2G9 1366 aa29.72■■■□□ 2.35
ME3-208ENST00000530335 BRD4O60885 1362 aaPredicted RBP29.7■■■□□ 2.35
ME3-208ENST00000530335 AKAP12Q02952 1782 aa29.68■■■□□ 2.34
ME3-208ENST00000530335 VPS72Q15906 364 aa29.68■■■□□ 2.34
ME3-208ENST00000530335 CABP1Q9NZU7 370 aa29.68■■■□□ 2.34
ME3-208ENST00000530335 NRKQ7Z2Y5 1582 aa29.66■■■□□ 2.34
ME3-208ENST00000530335 USP6P35125 1406 aa29.66■■■□□ 2.34
ME3-208ENST00000530335 NUTM2GQ5VZR2 741 aa29.64■■■□□ 2.34
ME3-208ENST00000530335 ABTB2Q8N961 1025 aa29.64■■■□□ 2.34
ME3-208ENST00000530335 ATAD2Q6PL18 1390 aa29.64■■■□□ 2.33
ME3-208ENST00000530335 BTG4Q9NY30 223 aa29.63■■■□□ 2.33
ME3-208ENST00000530335 BRWD3Q6RI45 1802 aa29.63■■■□□ 2.33
ME3-208ENST00000530335 PRDM11Q9NQV5 511 aa29.62■■■□□ 2.33
ME3-208ENST00000530335 USP19O94966 1318 aa29.61■■■□□ 2.33
ME3-208ENST00000530335 EP400Q96L91 3159 aa29.61■■■□□ 2.33
ME3-208ENST00000530335 KIAA0232Q92628 1395 aa29.61■■■□□ 2.33
ME3-208ENST00000530335 SSH2Q76I76 1423 aa29.61■■■□□ 2.33
ME3-208ENST00000530335 PIK3C2AO00443 1686 aa29.6■■■□□ 2.33
ME3-208ENST00000530335 CCDC9Q9Y3X0 531 aaKnown RBP29.58■■■□□ 2.33
ME3-208ENST00000530335 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
ME3-208ENST00000530335 CLSPNQ9HAW4 1339 aa29.57■■■□□ 2.32
ME3-208ENST00000530335 NLRP13Q86W25 1043 aa29.57■■■□□ 2.32
ME3-208ENST00000530335 ONECUT3O60422 494 aaPredicted RBP29.55■■■□□ 2.32
ME3-208ENST00000530335 ZNF692Q9BU19 519 aaPredicted RBP29.55■■■□□ 2.32
ME3-208ENST00000530335 CPSF1Q10570 1443 aaKnown RBP29.54■■■□□ 2.32
ME3-208ENST00000530335 CPDO75976 1380 aa29.54■■■□□ 2.32
ME3-208ENST00000530335 LMO7Q8WWI1 1683 aa29.54■■■□□ 2.32
ME3-208ENST00000530335 ZC3H6P61129 1189 aaKnown RBP29.54■■■□□ 2.32
ME3-208ENST00000530335 SLIT3O75094 1523 aa29.54■■■□□ 2.32
ME3-208ENST00000530335 CHRNA2Q15822 529 aa29.53■■■□□ 2.32
ME3-208ENST00000530335 SEPT12Q8IYM1 358 aa29.52■■■□□ 2.32
ME3-208ENST00000530335 GCP02774 474 aa29.5■■■□□ 2.31
ME3-208ENST00000530335 SPATA31A5Q5VU36 1347 aa29.49■■■□□ 2.31
ME3-208ENST00000530335 TTC21BQ7Z4L5 1316 aa29.49■■■□□ 2.31
ME3-208ENST00000530335 SPATA31A7Q8IWB4 1347 aa29.49■■■□□ 2.31
ME3-208ENST00000530335 NLRP6P59044 892 aa29.49■■■□□ 2.31
ME3-208ENST00000530335 TIMELESSQ9UNS1 1208 aa29.49■■■□□ 2.31
ME3-208ENST00000530335 CCER1Q8TC90 406 aaPredicted RBP29.48■■■□□ 2.31
ME3-208ENST00000530335 KTN1Q86UP2 1357 aaKnown RBP29.48■■■□□ 2.31
ME3-208ENST00000530335 TTC21AQ8NDW8 1320 aa29.47■■■□□ 2.31
ME3-208ENST00000530335 CAMTA1Q9Y6Y1 1673 aa29.47■■■□□ 2.31
ME3-208ENST00000530335 PUS7Q96PZ0 661 aaKnown RBP29.47■■■□□ 2.31
ME3-208ENST00000530335 TESK2Q96S53 571 aa29.47■■■□□ 2.31
ME3-208ENST00000530335 CD163L1Q9NR16 1453 aa29.47■■■□□ 2.31
ME3-208ENST00000530335 THSD7AQ9UPZ6 1657 aa29.47■■■□□ 2.31
ME3-208ENST00000530335 ST20-MTHFSA0A0A6YYL1 179 aa29.46■■■□□ 2.31
ME3-208ENST00000530335 FAM98CQ17RN3 349 aaKnown RBP29.45■■■□□ 2.31
ME3-208ENST00000530335 USP54Q70EL1 1684 aa29.44■■■□□ 2.3
ME3-208ENST00000530335 STRN4Q9NRL3 753 aa29.43■■■□□ 2.3
ME3-208ENST00000530335 SPATA31A1Q5TZJ5 1347 aa29.43■■■□□ 2.3
ME3-208ENST00000530335 SLC24A1O60721 1099 aa29.42■■■□□ 2.3
ME3-208ENST00000530335 USP47Q96K76 1375 aa29.41■■■□□ 2.3
ME3-208ENST00000530335 KRT27Q7Z3Y8 459 aa29.41■■■□□ 2.3
ME3-208ENST00000530335 CCDC125Q86Z20 511 aa29.41■■■□□ 2.3
ME3-208ENST00000530335 TMC1Q8TDI8 760 aa29.41■■■□□ 2.3
ME3-208ENST00000530335 COL18A1P39060 1754 aa29.41■■■□□ 2.3
ME3-208ENST00000530335 A0A0G2JS52 829 aa29.4■■■□□ 2.3
ME3-208ENST00000530335 MYT1Q01538 1121 aa29.4■■■□□ 2.3
ME3-208ENST00000530335 SLC12A5Q9H2X9 1139 aa29.39■■■□□ 2.3
ME3-208ENST00000530335 AATKQ6ZMQ8 1374 aa29.39■■■□□ 2.29
ME3-208ENST00000530335 COL5A2P05997 1499 aaPredicted RBP29.38■■■□□ 2.29
ME3-208ENST00000530335 EVA1CP58658 441 aa29.38■■■□□ 2.29
ME3-208ENST00000530335 NINLQ9Y2I6 1382 aa29.38■■■□□ 2.29
ME3-208ENST00000530335 HDGFL2Q7Z4V5 671 aaPredicted RBP29.37■■■□□ 2.29
ME3-208ENST00000530335 BLMP54132 1417 aaPredicted RBP29.37■■■□□ 2.29
ME3-208ENST00000530335 NFAT5O94916 1531 aa29.36■■■□□ 2.29
ME3-208ENST00000530335 KCNH5Q8NCM2 988 aa29.36■■■□□ 2.29
ME3-208ENST00000530335 A0A1W2PP64 1363 aa29.36■■■□□ 2.29
ME3-208ENST00000530335 EDC4Q6P2E9 1401 aaKnown RBP29.36■■■□□ 2.29
ME3-208ENST00000530335 TERF2IPQ9NYB0 399 aa29.35■■■□□ 2.29
ME3-208ENST00000530335 USP31Q70CQ4 1352 aa29.35■■■□□ 2.29
ME3-208ENST00000530335 LARP1Q6PKG0 1096 aaKnown RBP29.34■■■□□ 2.29
ME3-208ENST00000530335 RGPD5Q99666 1765 aa29.34■■■□□ 2.29
ME3-208ENST00000530335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.33■■■□□ 2.29
ME3-208ENST00000530335 ZBTB7CA1YPR0 619 aa29.32■■■□□ 2.28
ME3-208ENST00000530335 BARGINQ6ZT62 677 aa29.31■■■□□ 2.28
ME3-208ENST00000530335 ARHGEF25Q86VW2 580 aa29.31■■■□□ 2.28
ME3-208ENST00000530335 TMF1P82094 1093 aa29.3■■■□□ 2.28
ME3-208ENST00000530335 USP35Q9P2H5 1018 aa29.3■■■□□ 2.28
ME3-208ENST00000530335 ABCC6O95255 1503 aa29.3■■■□□ 2.28
ME3-208ENST00000530335 NME9Q86XW9 330 aa29.29■■■□□ 2.28
ME3-208ENST00000530335 CRB1P82279 1406 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms