RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 NUTM2BA6NNL0 878 aaPredicted RBP7.85□□□□□ -1.15
CTR9-205ENST00000529898 NUTM2EB1AL46 878 aaPredicted RBP7.85□□□□□ -1.15
CTR9-205ENST00000529898 J3QL48 77 aa7.85□□□□□ -1.15
CTR9-205ENST00000529898 PER1O15534 1290 aaPredicted RBP7.85□□□□□ -1.15
CTR9-205ENST00000529898 NUTM2DQ5VT03 806 aaPredicted RBP7.85□□□□□ -1.15
CTR9-205ENST00000529898 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
CTR9-205ENST00000529898 NUTM2AQ8IVF1 878 aaPredicted RBP7.85□□□□□ -1.15
CTR9-205ENST00000529898 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
CTR9-205ENST00000529898 BAP1Q92560 729 aa7.85□□□□□ -1.15
CTR9-205ENST00000529898 POLR3EQ9NVU0 708 aa7.85□□□□□ -1.15
CTR9-205ENST00000529898 ST8SIA5O15466 376 aa7.84□□□□□ -1.15
CTR9-205ENST00000529898 GOPCQ9HD26 462 aa7.84□□□□□ -1.15
CTR9-205ENST00000529898 VARSP26640 1264 aaKnown RBP7.83□□□□□ -1.16
CTR9-205ENST00000529898 EHBP1Q8NDI1 1231 aa7.83□□□□□ -1.16
CTR9-205ENST00000529898 MAP10Q9P2G4 905 aa7.83□□□□□ -1.16
CTR9-205ENST00000529898 AXIN1O15169 862 aa7.82□□□□□ -1.16
CTR9-205ENST00000529898 CTHP32929 405 aa7.82□□□□□ -1.16
CTR9-205ENST00000529898 FBXO31Q5XUX0 539 aaPredicted RBP7.82□□□□□ -1.16
CTR9-205ENST00000529898 HELBQ8NG08 1087 aaPredicted RBP7.82□□□□□ -1.16
CTR9-205ENST00000529898 POTECB2RU33 542 aa7.81□□□□□ -1.16
CTR9-205ENST00000529898 PROCA1Q8NCQ7 364 aaPredicted RBP7.81□□□□□ -1.16
CTR9-205ENST00000529898 HPS1Q92902 700 aa7.81□□□□□ -1.16
CTR9-205ENST00000529898 LINC01559Q495D7 138 aa7.8□□□□□ -1.16
CTR9-205ENST00000529898 ARMC2Q8NEN0 867 aa7.8□□□□□ -1.16
CTR9-205ENST00000529898 DACH1Q9UI36 760 aa7.8□□□□□ -1.16
CTR9-205ENST00000529898 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
CTR9-205ENST00000529898 CDK15Q96Q40 435 aa7.79□□□□□ -1.16
CTR9-205ENST00000529898 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
CTR9-205ENST00000529898 SH3RF1Q7Z6J0 888 aa7.78□□□□□ -1.16
CTR9-205ENST00000529898 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
CTR9-205ENST00000529898 FOXJ1Q92949 421 aa7.77□□□□□ -1.17
CTR9-205ENST00000529898 BRPF1P55201 1214 aaPredicted RBP7.76□□□□□ -1.17
CTR9-205ENST00000529898 BPHLQ86WA6 291 aaPredicted RBP7.76□□□□□ -1.17
CTR9-205ENST00000529898 FAM174AQ8TBP5 190 aa7.76□□□□□ -1.17
CTR9-205ENST00000529898 TSC1Q92574 1164 aa7.76□□□□□ -1.17
CTR9-205ENST00000529898 GPKOWQ92917 476 aaPredicted RBP eCLIP7.76□□□□□ -1.17
CTR9-205ENST00000529898 C1QTNF2Q9BXJ5 285 aa7.76□□□□□ -1.17
CTR9-205ENST00000529898 SH3BP5LQ7L8J4 393 aa7.75□□□□□ -1.17
CTR9-205ENST00000529898 ATP13A2Q9NQ11 1180 aa7.75□□□□□ -1.17
CTR9-205ENST00000529898 GMPR2Q9P2T1 348 aaKnown RBP7.75□□□□□ -1.17
CTR9-205ENST00000529898 NEUROD2Q15784 382 aa7.74□□□□□ -1.17
CTR9-205ENST00000529898 NBPF14Q5TI25 921 aa7.74□□□□□ -1.17
CTR9-205ENST00000529898 ZNF775Q96BV0 537 aaPredicted RBP7.74□□□□□ -1.17
CTR9-205ENST00000529898 KLF16Q9BXK1 252 aaPredicted RBP7.74□□□□□ -1.17
CTR9-205ENST00000529898 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
CTR9-205ENST00000529898 WASF2Q9Y6W5 498 aa7.74□□□□□ -1.17
CTR9-205ENST00000529898 TRMT44Q8IYL2 757 aaKnown RBP7.73□□□□□ -1.17
CTR9-205ENST00000529898 LRRN4Q8WUT4 740 aa7.73□□□□□ -1.17
CTR9-205ENST00000529898 ZC3H4Q9UPT8 1303 aaKnown RBP7.73□□□□□ -1.17
CTR9-205ENST00000529898 ADH1CP00326 375 aa7.72□□□□□ -1.17
CTR9-205ENST00000529898 GRM5P41594 1212 aa7.72□□□□□ -1.17
CTR9-205ENST00000529898 PDXDC2PQ6P474 469 aa7.72□□□□□ -1.17
CTR9-205ENST00000529898 RFC5P40937 340 aa7.71□□□□□ -1.18
CTR9-205ENST00000529898 NR5A1Q13285 461 aa7.71□□□□□ -1.18
CTR9-205ENST00000529898 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
CTR9-205ENST00000529898 SENP2Q9HC62 589 aa7.71□□□□□ -1.18
CTR9-205ENST00000529898 FKBPLQ9UIM3 349 aa7.71□□□□□ -1.18
CTR9-205ENST00000529898 MAP4K5Q9Y4K4 846 aa7.71□□□□□ -1.18
CTR9-205ENST00000529898 NNTQ13423 1086 aa7.7□□□□□ -1.18
CTR9-205ENST00000529898 TPRNQ4KMQ1 711 aa7.7□□□□□ -1.18
CTR9-205ENST00000529898 PCMTD1Q96MG8 357 aaPredicted RBP7.7□□□□□ -1.18
CTR9-205ENST00000529898 C11orf95C9JLR9 678 aaPredicted RBP7.69□□□□□ -1.18
CTR9-205ENST00000529898 CAPN5O15484 640 aaPredicted RBP7.69□□□□□ -1.18
CTR9-205ENST00000529898 AP1G2O75843 785 aa7.69□□□□□ -1.18
CTR9-205ENST00000529898 TMEM259Q4ZIN3 620 aa7.69□□□□□ -1.18
CTR9-205ENST00000529898 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
CTR9-205ENST00000529898 TRIM46Q7Z4K8 759 aa7.69□□□□□ -1.18
CTR9-205ENST00000529898 IL27Q8NEV9 243 aa7.69□□□□□ -1.18
CTR9-205ENST00000529898 KIFC2Q96AC6 838 aa7.69□□□□□ -1.18
CTR9-205ENST00000529898 GPSM3Q9Y4H4 160 aa7.69□□□□□ -1.18
CTR9-205ENST00000529898 TIMP2P16035 220 aa7.68□□□□□ -1.18
CTR9-205ENST00000529898 AGERQ15109 404 aa7.68□□□□□ -1.18
CTR9-205ENST00000529898 NR6A1Q15406 480 aa7.68□□□□□ -1.18
CTR9-205ENST00000529898 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
CTR9-205ENST00000529898 ERFEQ4G0M1 354 aa7.67□□□□□ -1.18
CTR9-205ENST00000529898 NR3C2P08235 984 aa7.66□□□□□ -1.18
CTR9-205ENST00000529898 SNRPBP14678 240 aaKnown RBP7.66□□□□□ -1.18
CTR9-205ENST00000529898 OCSTAMPQ9BR26 566 aa7.66□□□□□ -1.18
CTR9-205ENST00000529898 HMX1Q9NP08 348 aaPredicted RBP7.66□□□□□ -1.18
CTR9-205ENST00000529898 SOCS7O14512 581 aa7.65□□□□□ -1.18
CTR9-205ENST00000529898 WDR4P57081 412 aaKnown RBP7.65□□□□□ -1.18
CTR9-205ENST00000529898 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
CTR9-205ENST00000529898 TRIM34Q9BYJ4 488 aa7.65□□□□□ -1.18
CTR9-205ENST00000529898 ARID5BQ14865 1188 aa7.64□□□□□ -1.19
CTR9-205ENST00000529898 TREML4Q6UXN2 200 aa7.64□□□□□ -1.19
CTR9-205ENST00000529898 ARHGAP9Q9BRR9 750 aa7.64□□□□□ -1.19
CTR9-205ENST00000529898 CDV3Q9UKY7 258 aaKnown RBP7.64□□□□□ -1.19
CTR9-205ENST00000529898 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
CTR9-205ENST00000529898 MAGEB6P1A0A0J9YX57 407 aa7.63□□□□□ -1.19
CTR9-205ENST00000529898 PTK2Q05397 1052 aa7.63□□□□□ -1.19
CTR9-205ENST00000529898 BANK1Q8NDB2 785 aa7.63□□□□□ -1.19
CTR9-205ENST00000529898 BMP1P13497 986 aa7.62□□□□□ -1.19
CTR9-205ENST00000529898 VASH1Q7L8A9 365 aaPredicted RBP7.62□□□□□ -1.19
CTR9-205ENST00000529898 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
CTR9-205ENST00000529898 ITPKCQ96DU7 683 aa7.62□□□□□ -1.19
CTR9-205ENST00000529898 GJD4Q96KN9 370 aaPredicted RBP7.62□□□□□ -1.19
CTR9-205ENST00000529898 ZIC2O95409 532 aaPredicted RBP7.61□□□□□ -1.19
CTR9-205ENST00000529898 NFX1Q12986 1120 aaKnown RBP7.61□□□□□ -1.19
CTR9-205ENST00000529898 MRPL14Q6P1L8 145 aaKnown RBP7.61□□□□□ -1.19
CTR9-205ENST00000529898 FSHRP23945 695 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms