RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 PLCH1Q4KWH8 1693 aa22.04■■□□□ 1.12
CCDC90B-215ENST00000529745 PPIP5K1Q6PFW1 1433 aa22.04■■□□□ 1.12
CCDC90B-215ENST00000529745 BCL9LQ86UU0 1499 aa22.03■■□□□ 1.12
CCDC90B-215ENST00000529745 BRD4O60885 1362 aaPredicted RBP22.03■■□□□ 1.12
CCDC90B-215ENST00000529745 PHRF1Q9P1Y6 1649 aaKnown RBP22.03■■□□□ 1.12
CCDC90B-215ENST00000529745 ATRNO75882 1429 aa22.03■■□□□ 1.12
CCDC90B-215ENST00000529745 ACEP12821 1306 aa22.03■■□□□ 1.12
CCDC90B-215ENST00000529745 EVC2Q86UK5 1308 aa22.03■■□□□ 1.12
CCDC90B-215ENST00000529745 AKAP12Q02952 1782 aa22.02■■□□□ 1.12
CCDC90B-215ENST00000529745 CCDC125Q86Z20 511 aa22.02■■□□□ 1.12
CCDC90B-215ENST00000529745 SRPK2P78362 688 aaKnown RBP22.01■■□□□ 1.11
CCDC90B-215ENST00000529745 CARD11Q9BXL7 1154 aa22.01■■□□□ 1.11
CCDC90B-215ENST00000529745 USP21Q9UK80 565 aa22.01■■□□□ 1.11
CCDC90B-215ENST00000529745 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
CCDC90B-215ENST00000529745 COL14A1Q05707 1796 aaKnown RBP21.99■■□□□ 1.11
CCDC90B-215ENST00000529745 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
CCDC90B-215ENST00000529745 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
CCDC90B-215ENST00000529745 NRAPQ86VF7 1730 aa21.98■■□□□ 1.11
CCDC90B-215ENST00000529745 TRPC5Q9UL62 973 aaPredicted RBP21.98■■□□□ 1.11
CCDC90B-215ENST00000529745 LRP5O75197 1615 aa21.98■■□□□ 1.11
CCDC90B-215ENST00000529745 CABLES1Q8TDN4 633 aa21.97■■□□□ 1.11
CCDC90B-215ENST00000529745 LMOD2Q6P5Q4 547 aa21.96■■□□□ 1.11
CCDC90B-215ENST00000529745 USP6P35125 1406 aa21.95■■□□□ 1.1
CCDC90B-215ENST00000529745 NRKQ7Z2Y5 1582 aa21.95■■□□□ 1.1
CCDC90B-215ENST00000529745 MON2Q7Z3U7 1717 aa21.94■■□□□ 1.1
CCDC90B-215ENST00000529745 SSH2Q76I76 1423 aa21.94■■□□□ 1.1
CCDC90B-215ENST00000529745 GLI3P10071 1580 aa21.93■■□□□ 1.1
CCDC90B-215ENST00000529745 HAP1P54257 671 aaPredicted RBP21.93■■□□□ 1.1
CCDC90B-215ENST00000529745 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
CCDC90B-215ENST00000529745 PAK3O75914 559 aaPredicted RBP21.92■■□□□ 1.1
CCDC90B-215ENST00000529745 CABP1Q9NZU7 370 aa21.92■■□□□ 1.1
CCDC90B-215ENST00000529745 CPSF1Q10570 1443 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-215ENST00000529745 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
CCDC90B-215ENST00000529745 PIK3C2AO00443 1686 aa21.91■■□□□ 1.1
CCDC90B-215ENST00000529745 USP19O94966 1318 aa21.9■■□□□ 1.1
CCDC90B-215ENST00000529745 USP54Q70EL1 1684 aa21.88■■□□□ 1.09
CCDC90B-215ENST00000529745 FAM83GA6ND36 823 aa21.88■■□□□ 1.09
CCDC90B-215ENST00000529745 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
CCDC90B-215ENST00000529745 GJD4Q96KN9 370 aaPredicted RBP21.88■■□□□ 1.09
CCDC90B-215ENST00000529745 ZNF692Q9BU19 519 aaPredicted RBP21.88■■□□□ 1.09
CCDC90B-215ENST00000529745 SLIT3O75094 1523 aa21.87■■□□□ 1.09
CCDC90B-215ENST00000529745 LMO7Q8WWI1 1683 aa21.86■■□□□ 1.09
CCDC90B-215ENST00000529745 VPS72Q15906 364 aa21.86■■□□□ 1.09
CCDC90B-215ENST00000529745 TESK2Q96S53 571 aa21.86■■□□□ 1.09
CCDC90B-215ENST00000529745 ABTB2Q8N961 1025 aa21.85■■□□□ 1.09
CCDC90B-215ENST00000529745 BLMP54132 1417 aaPredicted RBP21.85■■□□□ 1.09
CCDC90B-215ENST00000529745 CPDO75976 1380 aa21.85■■□□□ 1.09
CCDC90B-215ENST00000529745 CD163L1Q9NR16 1453 aa21.84■■□□□ 1.09
CCDC90B-215ENST00000529745 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
CCDC90B-215ENST00000529745 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.09
CCDC90B-215ENST00000529745 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.09
CCDC90B-215ENST00000529745 TTC21AQ8NDW8 1320 aa21.82■■□□□ 1.08
CCDC90B-215ENST00000529745 KIAA0232Q92628 1395 aa21.82■■□□□ 1.08
CCDC90B-215ENST00000529745 USP47Q96K76 1375 aa21.82■■□□□ 1.08
CCDC90B-215ENST00000529745 PLEKHG5O94827 1062 aa21.81■■□□□ 1.08
CCDC90B-215ENST00000529745 NINLQ9Y2I6 1382 aa21.81■■□□□ 1.08
CCDC90B-215ENST00000529745 ONECUT3O60422 494 aaPredicted RBP21.8■■□□□ 1.08
CCDC90B-215ENST00000529745 DEFB132Q7Z7B7 95 aa21.8■■□□□ 1.08
CCDC90B-215ENST00000529745 PRDM11Q9NQV5 511 aa21.8■■□□□ 1.08
CCDC90B-215ENST00000529745 BTG4Q9NY30 223 aa21.8■■□□□ 1.08
CCDC90B-215ENST00000529745 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
CCDC90B-215ENST00000529745 KTN1Q86UP2 1357 aaKnown RBP21.79■■□□□ 1.08
CCDC90B-215ENST00000529745 NUTM2GQ5VZR2 741 aa21.79■■□□□ 1.08
CCDC90B-215ENST00000529745 GCP02774 474 aa21.78■■□□□ 1.08
CCDC90B-215ENST00000529745 CCER1Q8TC90 406 aaPredicted RBP21.78■■□□□ 1.08
CCDC90B-215ENST00000529745 COL18A1P39060 1754 aa21.78■■□□□ 1.08
CCDC90B-215ENST00000529745 THSD7AQ9UPZ6 1657 aa21.76■■□□□ 1.07
CCDC90B-215ENST00000529745 CAMTA1Q9Y6Y1 1673 aa21.76■■□□□ 1.07
CCDC90B-215ENST00000529745 EDC4Q6P2E9 1401 aaKnown RBP21.75■■□□□ 1.07
CCDC90B-215ENST00000529745 NLRP6P59044 892 aa21.75■■□□□ 1.07
CCDC90B-215ENST00000529745 ZC3H6P61129 1189 aaKnown RBP21.75■■□□□ 1.07
CCDC90B-215ENST00000529745 USP31Q70CQ4 1352 aa21.74■■□□□ 1.07
CCDC90B-215ENST00000529745 NFAT5O94916 1531 aa21.74■■□□□ 1.07
CCDC90B-215ENST00000529745 ABCC6O95255 1503 aa21.74■■□□□ 1.07
CCDC90B-215ENST00000529745 SPATA31A5Q5VU36 1347 aa21.74■■□□□ 1.07
CCDC90B-215ENST00000529745 SPATA31A7Q8IWB4 1347 aa21.74■■□□□ 1.07
CCDC90B-215ENST00000529745 A0A1W2PP64 1363 aa21.73■■□□□ 1.07
CCDC90B-215ENST00000529745 TMF1P82094 1093 aa21.72■■□□□ 1.07
CCDC90B-215ENST00000529745 HDGFL2Q7Z4V5 671 aaPredicted RBP21.72■■□□□ 1.07
CCDC90B-215ENST00000529745 SLC12A5Q9H2X9 1139 aa21.72■■□□□ 1.07
CCDC90B-215ENST00000529745 MYOM1P52179 1685 aa21.72■■□□□ 1.07
CCDC90B-215ENST00000529745 AATKQ6ZMQ8 1374 aa21.72■■□□□ 1.07
CCDC90B-215ENST00000529745 MSH5O43196 834 aa21.71■■□□□ 1.07
CCDC90B-215ENST00000529745 SF3B2Q13435 895 aaKnown RBP21.71■■□□□ 1.07
CCDC90B-215ENST00000529745 CHRNA2Q15822 529 aa21.71■■□□□ 1.07
CCDC90B-215ENST00000529745 TERF2IPQ9NYB0 399 aa21.71■■□□□ 1.07
CCDC90B-215ENST00000529745 KCNH5Q8NCM2 988 aa21.7■■□□□ 1.06
CCDC90B-215ENST00000529745 COL5A2P05997 1499 aaPredicted RBP21.7■■□□□ 1.06
CCDC90B-215ENST00000529745 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
CCDC90B-215ENST00000529745 PSDA5PKW4 1024 aaPredicted RBP21.69■■□□□ 1.06
CCDC90B-215ENST00000529745 SEPT12Q8IYM1 358 aa21.69■■□□□ 1.06
CCDC90B-215ENST00000529745 TMC1Q8TDI8 760 aa21.69■■□□□ 1.06
CCDC90B-215ENST00000529745 CCDC9Q9Y3X0 531 aaKnown RBP21.69■■□□□ 1.06
CCDC90B-215ENST00000529745 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
CCDC90B-215ENST00000529745 ANKRD36BQ8N2N9 1353 aa21.68■■□□□ 1.06
CCDC90B-215ENST00000529745 LTN1O94822 1766 aa21.68■■□□□ 1.06
CCDC90B-215ENST00000529745 OVOS2A0A0J9YW53 1432 aa21.67■■□□□ 1.06
CCDC90B-215ENST00000529745 OVOS2Q6IE36 1432 aa21.67■■□□□ 1.06
CCDC90B-215ENST00000529745 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
CCDC90B-215ENST00000529745 ARHGEF25Q86VW2 580 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms