RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 LINC01559Q495D7 138 aa9.84□□□□□ -0.83
C11orf88-204ENST00000529661 TRAF7Q6Q0C0 670 aa9.84□□□□□ -0.83
C11orf88-204ENST00000529661 LRRN4Q8WUT4 740 aa9.83□□□□□ -0.84
C11orf88-204ENST00000529661 SKOR1P84550 965 aa9.82□□□□□ -0.84
C11orf88-204ENST00000529661 BAP1Q92560 729 aa9.82□□□□□ -0.84
C11orf88-204ENST00000529661 USP17L8P0C7I0 530 aa9.81□□□□□ -0.84
C11orf88-204ENST00000529661 WNT7BP56706 349 aa9.81□□□□□ -0.84
C11orf88-204ENST00000529661 WNT7AO00755 349 aa9.8□□□□□ -0.84
C11orf88-204ENST00000529661 RC3H1Q5TC82 1133 aaKnown RBP9.8□□□□□ -0.84
C11orf88-204ENST00000529661 FAM187AA6NFU0 413 aa9.79□□□□□ -0.84
C11orf88-204ENST00000529661 SH3BP2P78314 561 aa9.79□□□□□ -0.84
C11orf88-204ENST00000529661 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
C11orf88-204ENST00000529661 ZNF511Q8NB15 262 aa9.79□□□□□ -0.84
C11orf88-204ENST00000529661 DGAT1O75907 488 aa9.78□□□□□ -0.84
C11orf88-204ENST00000529661 PKDCCQ504Y2 493 aa9.78□□□□□ -0.84
C11orf88-204ENST00000529661 CYP4X1Q8N118 509 aa9.78□□□□□ -0.84
C11orf88-204ENST00000529661 EHBP1Q8NDI1 1231 aa9.78□□□□□ -0.84
C11orf88-204ENST00000529661 MRGPRX2Q96LB1 330 aa9.78□□□□□ -0.84
C11orf88-204ENST00000529661 TOR4AQ9NXH8 423 aa9.78□□□□□ -0.84
C11orf88-204ENST00000529661 NR6A1Q15406 480 aa9.77□□□□□ -0.85
C11orf88-204ENST00000529661 TTC24A2A3L6 582 aaPredicted RBP9.76□□□□□ -0.85
C11orf88-204ENST00000529661 ARMC2Q8NEN0 867 aa9.76□□□□□ -0.85
C11orf88-204ENST00000529661 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
C11orf88-204ENST00000529661 MYT1Q01538 1121 aa9.75□□□□□ -0.85
C11orf88-204ENST00000529661 AGERQ15109 404 aa9.75□□□□□ -0.85
C11orf88-204ENST00000529661 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
C11orf88-204ENST00000529661 FOXJ1Q92949 421 aa9.74□□□□□ -0.85
C11orf88-204ENST00000529661 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
C11orf88-204ENST00000529661 SNIP1Q8TAD8 396 aaKnown RBP9.72□□□□□ -0.85
C11orf88-204ENST00000529661 BPHLQ86WA6 291 aaPredicted RBP9.71□□□□□ -0.86
C11orf88-204ENST00000529661 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
C11orf88-204ENST00000529661 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
C11orf88-204ENST00000529661 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
C11orf88-204ENST00000529661 ALDH1A1P00352 501 aa9.7□□□□□ -0.86
C11orf88-204ENST00000529661 BANK1Q8NDB2 785 aa9.7□□□□□ -0.86
C11orf88-204ENST00000529661 J3QL48 77 aa9.69□□□□□ -0.86
C11orf88-204ENST00000529661 SMPD1P17405 629 aa9.69□□□□□ -0.86
C11orf88-204ENST00000529661 VARSP26640 1264 aaKnown RBP9.69□□□□□ -0.86
C11orf88-204ENST00000529661 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
C11orf88-204ENST00000529661 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
C11orf88-204ENST00000529661 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
C11orf88-204ENST00000529661 SIAH2O43255 324 aa9.68□□□□□ -0.86
C11orf88-204ENST00000529661 AVPP01185 164 aa9.68□□□□□ -0.86
C11orf88-204ENST00000529661 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
C11orf88-204ENST00000529661 FAM174AQ8TBP5 190 aa9.68□□□□□ -0.86
C11orf88-204ENST00000529661 GPKOWQ92917 476 aaPredicted RBP eCLIP9.68□□□□□ -0.86
C11orf88-204ENST00000529661 TRIM34Q9BYJ4 488 aa9.68□□□□□ -0.86
C11orf88-204ENST00000529661 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
C11orf88-204ENST00000529661 SH3BP5LQ7L8J4 393 aa9.67□□□□□ -0.86
C11orf88-204ENST00000529661 AAASQ9NRG9 546 aa9.67□□□□□ -0.86
C11orf88-204ENST00000529661 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
C11orf88-204ENST00000529661 ARID5BQ14865 1188 aa9.66□□□□□ -0.86
C11orf88-204ENST00000529661 TMEM132AQ24JP5 1023 aa9.66□□□□□ -0.86
C11orf88-204ENST00000529661 MTMR14Q8NCE2 650 aa9.66□□□□□ -0.86
C11orf88-204ENST00000529661 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
C11orf88-204ENST00000529661 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
C11orf88-204ENST00000529661 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
C11orf88-204ENST00000529661 ARHGAP9Q9BRR9 750 aa9.65□□□□□ -0.86
C11orf88-204ENST00000529661 WASF2Q9Y6W5 498 aa9.65□□□□□ -0.86
C11orf88-204ENST00000529661 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
C11orf88-204ENST00000529661 PTK2Q05397 1052 aa9.63□□□□□ -0.87
C11orf88-204ENST00000529661 POTECB2RU33 542 aa9.62□□□□□ -0.87
C11orf88-204ENST00000529661 APBB1O00213 710 aa9.62□□□□□ -0.87
C11orf88-204ENST00000529661 ZNF787Q6DD87 383 aa9.62□□□□□ -0.87
C11orf88-204ENST00000529661 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
C11orf88-204ENST00000529661 HPS1Q92902 700 aa9.62□□□□□ -0.87
C11orf88-204ENST00000529661 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
C11orf88-204ENST00000529661 SMCPP49901 116 aaPredicted RBP9.61□□□□□ -0.87
C11orf88-204ENST00000529661 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
C11orf88-204ENST00000529661 C1QTNF2Q9BXJ5 285 aa9.61□□□□□ -0.87
C11orf88-204ENST00000529661 AXIN1O15169 862 aa9.6□□□□□ -0.87
C11orf88-204ENST00000529661 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
C11orf88-204ENST00000529661 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
C11orf88-204ENST00000529661 NDUFB9Q9Y6M9 179 aa9.6□□□□□ -0.87
C11orf88-204ENST00000529661 SOCS7O14512 581 aa9.59□□□□□ -0.87
C11orf88-204ENST00000529661 ADH1CP00326 375 aa9.59□□□□□ -0.87
C11orf88-204ENST00000529661 MPNDQ8N594 471 aa9.59□□□□□ -0.87
C11orf88-204ENST00000529661 ADAM32Q8TC27 787 aa9.59□□□□□ -0.87
C11orf88-204ENST00000529661 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
C11orf88-204ENST00000529661 OCSTAMPQ9BR26 566 aa9.59□□□□□ -0.87
C11orf88-204ENST00000529661 VASH1Q7L8A9 365 aaPredicted RBP9.58□□□□□ -0.88
C11orf88-204ENST00000529661 TRMT44Q8IYL2 757 aaKnown RBP9.58□□□□□ -0.88
C11orf88-204ENST00000529661 CDK15Q96Q40 435 aa9.58□□□□□ -0.88
C11orf88-204ENST00000529661 NNTQ13423 1086 aa9.57□□□□□ -0.88
C11orf88-204ENST00000529661 MCM6Q14566 821 aa9.57□□□□□ -0.88
C11orf88-204ENST00000529661 FSHRP23945 695 aa9.56□□□□□ -0.88
C11orf88-204ENST00000529661 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
C11orf88-204ENST00000529661 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
C11orf88-204ENST00000529661 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
C11orf88-204ENST00000529661 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
C11orf88-204ENST00000529661 GRM5P41594 1212 aa9.55□□□□□ -0.88
C11orf88-204ENST00000529661 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
C11orf88-204ENST00000529661 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
C11orf88-204ENST00000529661 GPR37L1O60883 481 aa9.54□□□□□ -0.88
C11orf88-204ENST00000529661 NR5A1Q13285 461 aa9.54□□□□□ -0.88
C11orf88-204ENST00000529661 DZIP3Q86Y13 1208 aaKnown RBP9.54□□□□□ -0.88
C11orf88-204ENST00000529661 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
C11orf88-204ENST00000529661 NR3C2P08235 984 aa9.53□□□□□ -0.88
C11orf88-204ENST00000529661 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
C11orf88-204ENST00000529661 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms