RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 TNS3Q68CZ2 1445 aa12.77□□□□□ -0.37
TGFBR3-208ENST00000529608 NRXN1Q9ULB1 1477 aa12.77□□□□□ -0.37
TGFBR3-208ENST00000529608 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
TGFBR3-208ENST00000529608 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
TGFBR3-208ENST00000529608 C14orf93Q9H972 538 aaKnown RBP12.75□□□□□ -0.37
TGFBR3-208ENST00000529608 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
TGFBR3-208ENST00000529608 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
TGFBR3-208ENST00000529608 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
TGFBR3-208ENST00000529608 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
TGFBR3-208ENST00000529608 VPS72Q15906 364 aa12.74□□□□□ -0.37
TGFBR3-208ENST00000529608 SEPT12Q8IYM1 358 aa12.74□□□□□ -0.37
TGFBR3-208ENST00000529608 SIRT1Q96EB6 747 aa12.73□□□□□ -0.37
TGFBR3-208ENST00000529608 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
TGFBR3-208ENST00000529608 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 POTEHQ6S545 545 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 PROM2Q8N271 834 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 LRP5O75197 1615 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 ADGRB1O14514 1584 aa12.72□□□□□ -0.37
TGFBR3-208ENST00000529608 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
TGFBR3-208ENST00000529608 DLC1Q96QB1 1528 aa12.71□□□□□ -0.38
TGFBR3-208ENST00000529608 FKBP8Q14318 412 aa12.7□□□□□ -0.38
TGFBR3-208ENST00000529608 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
TGFBR3-208ENST00000529608 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 PRR36Q9H6K5 1346 aa12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 PSME1Q06323 249 aa12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 CCDC9Q9Y3X0 531 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-208ENST00000529608 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-208ENST00000529608 FAM182BQ5T319 152 aa12.68□□□□□ -0.38
TGFBR3-208ENST00000529608 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
TGFBR3-208ENST00000529608 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
TGFBR3-208ENST00000529608 THSD7AQ9UPZ6 1657 aa12.67□□□□□ -0.38
TGFBR3-208ENST00000529608 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-208ENST00000529608 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-208ENST00000529608 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-208ENST00000529608 RGPD1P0DJD0 1748 aa12.67□□□□□ -0.38
TGFBR3-208ENST00000529608 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
TGFBR3-208ENST00000529608 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
TGFBR3-208ENST00000529608 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
TGFBR3-208ENST00000529608 TRAK1Q9UPV9 953 aa12.65□□□□□ -0.38
TGFBR3-208ENST00000529608 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
TGFBR3-208ENST00000529608 PHRF1Q9P1Y6 1649 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-208ENST00000529608 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-208ENST00000529608 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
TGFBR3-208ENST00000529608 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-208ENST00000529608 POGKQ9P215 609 aa12.64□□□□□ -0.39
TGFBR3-208ENST00000529608 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-208ENST00000529608 A0A0G2JS52 829 aa12.63□□□□□ -0.39
TGFBR3-208ENST00000529608 MYT1Q01538 1121 aa12.63□□□□□ -0.39
TGFBR3-208ENST00000529608 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-208ENST00000529608 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-208ENST00000529608 HRCP23327 699 aa12.62□□□□□ -0.39
TGFBR3-208ENST00000529608 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
TGFBR3-208ENST00000529608 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
TGFBR3-208ENST00000529608 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
TGFBR3-208ENST00000529608 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
TGFBR3-208ENST00000529608 ATP7BP35670 1465 aa12.61□□□□□ -0.39
TGFBR3-208ENST00000529608 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
TGFBR3-208ENST00000529608 WASLO00401 505 aaPredicted RBP12.6□□□□□ -0.39
TGFBR3-208ENST00000529608 BAG6P46379 1132 aa12.6□□□□□ -0.39
TGFBR3-208ENST00000529608 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
TGFBR3-208ENST00000529608 GPRASP1Q5JY77 1395 aa12.59□□□□□ -0.39
TGFBR3-208ENST00000529608 KDM2AQ9Y2K7 1162 aa12.59□□□□□ -0.39
TGFBR3-208ENST00000529608 RREB1Q92766 1687 aa12.58□□□□□ -0.4
TGFBR3-208ENST00000529608 DISP2A7MBM2 1401 aa12.58□□□□□ -0.4
TGFBR3-208ENST00000529608 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-208ENST00000529608 CHRNA2Q15822 529 aa12.58□□□□□ -0.4
TGFBR3-208ENST00000529608 EZH2Q15910 746 aaKnown RBP12.58□□□□□ -0.4
TGFBR3-208ENST00000529608 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 NGDNQ8NEJ9 315 aaKnown RBP12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 SPATA31A1Q5TZJ5 1347 aa12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
TGFBR3-208ENST00000529608 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
TGFBR3-208ENST00000529608 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
TGFBR3-208ENST00000529608 LMO7Q8WWI1 1683 aa12.56□□□□□ -0.4
TGFBR3-208ENST00000529608 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
TGFBR3-208ENST00000529608 CAMTA1Q9Y6Y1 1673 aa12.55□□□□□ -0.4
TGFBR3-208ENST00000529608 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
TGFBR3-208ENST00000529608 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
TGFBR3-208ENST00000529608 TRIM37O94972 964 aa12.54□□□□□ -0.4
TGFBR3-208ENST00000529608 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-208ENST00000529608 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
TGFBR3-208ENST00000529608 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
TGFBR3-208ENST00000529608 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
TGFBR3-208ENST00000529608 ACEP12821 1306 aa12.52□□□□□ -0.41
TGFBR3-208ENST00000529608 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-208ENST00000529608 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
TGFBR3-208ENST00000529608 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-208ENST00000529608 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
TGFBR3-208ENST00000529608 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms