RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 FAM161AQ3B820 660 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 MEX3CQ5U5Q3 659 aaKnown RBP5.8□□□□□ -1.48
CASP4-207ENST00000529565 MAGI2Q86UL8 1455 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 ZCCHC11Q5TAX3 1644 aaKnown RBP5.8□□□□□ -1.48
CASP4-207ENST00000529565 PREX2Q70Z35 1606 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 ANKRD45Q5TZF3 282 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 ARAP3Q8WWN8 1544 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 PTMSP20962 102 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 EXOSC9Q06265 439 aaKnown RBP5.8□□□□□ -1.48
CASP4-207ENST00000529565 TWISTNBQ3B726 338 aaPredicted RBP5.8□□□□□ -1.48
CASP4-207ENST00000529565 CDCA7LQ96GN5 454 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 TSHZ2Q9NRE2 1034 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 ABCC1P33527 1531 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 MLH3Q9UHC1 1453 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 LRRFIP1Q32MZ4 808 aaKnown RBP5.8□□□□□ -1.48
CASP4-207ENST00000529565 TTC21AQ8NDW8 1320 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 SAMD9LQ8IVG5 1584 aa5.8□□□□□ -1.48
CASP4-207ENST00000529565 GNAI3P08754 354 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 RRS1Q15050 365 aaKnown RBP5.79□□□□□ -1.48
CASP4-207ENST00000529565 PRDM11Q9NQV5 511 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 TTC21BQ7Z4L5 1316 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 TMPOP42166 694 aaKnown RBP5.79□□□□□ -1.48
CASP4-207ENST00000529565 ZNF530Q6P9A1 599 aaPredicted RBP5.79□□□□□ -1.48
CASP4-207ENST00000529565 ASXL1Q8IXJ9 1541 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 MFAP1P55081 439 aaKnown RBP5.79□□□□□ -1.48
CASP4-207ENST00000529565 SAMD1Q6SPF0 538 aaPredicted RBP5.79□□□□□ -1.48
CASP4-207ENST00000529565 CADPS2Q86UW7 1296 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 CCDC184Q52MB2 194 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 NME9Q86XW9 330 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 TBX22Q9Y458 520 aa5.79□□□□□ -1.48
CASP4-207ENST00000529565 NAP1L2Q9ULW6 460 aaPredicted RBP5.78□□□□□ -1.48
CASP4-207ENST00000529565 TTC37Q6PGP7 1564 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 ADCY10Q96PN6 1610 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 SLFN5Q08AF3 891 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 RIC3Q7Z5B4 369 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 WWC1Q8IX03 1113 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 TESK2Q96S53 571 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 KDM5DQ9BY66 1539 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 HSP90B1P14625 803 aaKnown RBP5.78□□□□□ -1.48
CASP4-207ENST00000529565 PDE4AP27815 886 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 TOM1L2Q6ZVM7 507 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 SYTL4Q96C24 671 aaPredicted RBP5.78□□□□□ -1.48
CASP4-207ENST00000529565 CHMP4CQ96CF2 233 aa5.78□□□□□ -1.48
CASP4-207ENST00000529565 UBTFL1P0CB47 393 aaPredicted RBP5.77□□□□□ -1.49
CASP4-207ENST00000529565 G3BP1Q13283 466 aaKnown RBP eCLIP5.77□□□□□ -1.49
CASP4-207ENST00000529565 AMOTQ4VCS5 1084 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 PANK1Q8TE04 598 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 RUFY2Q8WXA3 655 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 NECTIN2Q92692 538 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 ACEP12821 1306 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 YTHDC2Q9H6S0 1430 aaKnown RBP5.77□□□□□ -1.49
CASP4-207ENST00000529565 GNAT3A8MTJ3 354 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 ST18O60284 1047 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 CCT4P50991 539 aaKnown RBP5.77□□□□□ -1.49
CASP4-207ENST00000529565 IPO9Q96P70 1041 aaKnown RBP5.77□□□□□ -1.49
CASP4-207ENST00000529565 GBP4Q96PP9 640 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 GOLGA6L4A6NEF3 574 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 REC8O95072 547 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 HMGB2P26583 209 aaKnown RBP5.77□□□□□ -1.49
CASP4-207ENST00000529565 HDGFL1Q5TGJ6 251 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 IFT57Q9NWB7 429 aa5.77□□□□□ -1.49
CASP4-207ENST00000529565 IFIT2P09913 472 aaKnown RBP5.76□□□□□ -1.49
CASP4-207ENST00000529565 CABP4P57796 275 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 STRN4Q9NRL3 753 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 PARD3Q8TEW0 1356 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 COL17A1Q9UMD9 1497 aaPredicted RBP5.76□□□□□ -1.49
CASP4-207ENST00000529565 HTATSF1O43719 755 aaKnown RBP5.76□□□□□ -1.49
CASP4-207ENST00000529565 SLC4A2P04920 1241 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 ATF7IPQ6VMQ6 1270 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 TSR2Q969E8 191 aaKnown RBP5.76□□□□□ -1.49
CASP4-207ENST00000529565 MSH6P52701 1360 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 ERC2O15083 957 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 PPIP5K1Q6PFW1 1433 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 NPC1L1Q9UHC9 1359 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 TRPM2O94759 1503 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 NPATQ14207 1427 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 FOXO3O43524 673 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 KRT28Q7Z3Y7 464 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 GCC1Q96CN9 775 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 EMILIN1Q9Y6C2 1016 aa5.76□□□□□ -1.49
CASP4-207ENST00000529565 ALDH1L2Q3SY69 923 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 TRIM44Q96DX7 344 aaPredicted RBP5.75□□□□□ -1.49
CASP4-207ENST00000529565 DIAPH3Q9NSV4 1193 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 HECW2Q9P2P5 1572 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 IL16Q14005 1332 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 CLASP1Q7Z460 1538 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 XPCQ01831 940 aaPredicted RBP5.75□□□□□ -1.49
CASP4-207ENST00000529565 RILPL2Q969X0 211 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 SIRT1Q96EB6 747 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 NOB1Q9ULX3 412 aaKnown RBP5.75□□□□□ -1.49
CASP4-207ENST00000529565 KIF3AQ9Y496 699 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 POLR3AO14802 1390 aaPredicted RBP5.75□□□□□ -1.49
CASP4-207ENST00000529565 ERCC6L2Q5T890 1561 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 FYB1O15117 783 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 FRAT2O75474 233 aaPredicted RBP5.75□□□□□ -1.49
CASP4-207ENST00000529565 ZC3H6P61129 1189 aaKnown RBP5.75□□□□□ -1.49
CASP4-207ENST00000529565 PLXNC1O60486 1568 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 YEATS2Q9ULM3 1422 aa5.75□□□□□ -1.49
CASP4-207ENST00000529565 G3V3G9 751 aa5.74□□□□□ -1.49
CASP4-207ENST00000529565 GNAI2P04899 355 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms