RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 PHOX2BQ99453 314 aa4.11□□□□□ -1.75
FDFT1-216ENST00000529521 ADAMTS8Q9UP79 889 aa4.11□□□□□ -1.75
FDFT1-216ENST00000529521 CCDC9Q9Y3X0 531 aaKnown RBP4.11□□□□□ -1.75
FDFT1-216ENST00000529521 PTCRAQ6ISU1 281 aaPredicted RBP4.1□□□□□ -1.75
FDFT1-216ENST00000529521 MRPL14Q6P1L8 145 aaKnown RBP4.1□□□□□ -1.75
FDFT1-216ENST00000529521 KCNV2Q8TDN2 545 aa4.1□□□□□ -1.75
FDFT1-216ENST00000529521 PURBQ96QR8 312 aaKnown RBP4.1□□□□□ -1.75
FDFT1-216ENST00000529521 RNF225M0QZC1 329 aaPredicted RBP4.09□□□□□ -1.75
FDFT1-216ENST00000529521 KRT76Q01546 638 aa4.09□□□□□ -1.75
FDFT1-216ENST00000529521 GPAT2Q6NUI2 795 aa4.09□□□□□ -1.75
FDFT1-216ENST00000529521 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
FDFT1-216ENST00000529521 BCCIPQ9P287 314 aaKnown RBP eCLIP4.09□□□□□ -1.75
FDFT1-216ENST00000529521 PPFIA3O75145 1194 aa4.08□□□□□ -1.76
FDFT1-216ENST00000529521 SH3BP2P78314 561 aa4.08□□□□□ -1.76
FDFT1-216ENST00000529521 SCARF1Q14162 830 aa4.08□□□□□ -1.76
FDFT1-216ENST00000529521 ZNF326Q5BKZ1 582 aaKnown RBP4.08□□□□□ -1.76
FDFT1-216ENST00000529521 HLA-CQ95604 372 aa4.08□□□□□ -1.76
FDFT1-216ENST00000529521 GNPATO15228 680 aa4.07□□□□□ -1.76
FDFT1-216ENST00000529521 TIMP2P16035 220 aa4.07□□□□□ -1.76
FDFT1-216ENST00000529521 JUNDP17535 347 aa4.07□□□□□ -1.76
FDFT1-216ENST00000529521 DNMT3AQ9Y6K1 912 aaPredicted RBP4.07□□□□□ -1.76
FDFT1-216ENST00000529521 TLL2Q9Y6L7 1015 aa4.07□□□□□ -1.76
FDFT1-216ENST00000529521 GPR37O15354 613 aa4.06□□□□□ -1.76
FDFT1-216ENST00000529521 IGHA1P01876 353 aa4.06□□□□□ -1.76
FDFT1-216ENST00000529521 NNTQ13423 1086 aa4.06□□□□□ -1.76
FDFT1-216ENST00000529521 GPR161Q8N6U8 529 aaKnown RBP4.06□□□□□ -1.76
FDFT1-216ENST00000529521 POLR3GLQ9BT43 218 aa4.06□□□□□ -1.76
FDFT1-216ENST00000529521 KLF16Q9BXK1 252 aaPredicted RBP4.06□□□□□ -1.76
FDFT1-216ENST00000529521 SEMA3EO15041 775 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 MAN1A2O60476 641 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 KDM4AO75164 1064 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 CD46P15529 392 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 IRS1P35568 1242 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 WDR4P57081 412 aaKnown RBP4.05□□□□□ -1.76
FDFT1-216ENST00000529521 SMYD5Q6GMV2 418 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 SYMPKQ92797 1274 aaKnown RBP4.05□□□□□ -1.76
FDFT1-216ENST00000529521 CCDC136Q96JN2 1154 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 CNTNAP3BQ96NU0 1288 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 NUDT12Q9BQG2 462 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 CNTNAP3Q9BZ76 1288 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 RSPH6AQ9H0K4 717 aa4.05□□□□□ -1.76
FDFT1-216ENST00000529521 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
FDFT1-216ENST00000529521 ADH1CP00326 375 aa4.04□□□□□ -1.76
FDFT1-216ENST00000529521 RBM26Q5T8P6 1007 aaKnown RBP4.04□□□□□ -1.76
FDFT1-216ENST00000529521 ZNF385CQ66K41 422 aaPredicted RBP4.04□□□□□ -1.76
FDFT1-216ENST00000529521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.04□□□□□ -1.76
FDFT1-216ENST00000529521 ZBTB7CA1YPR0 619 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 GUCA2AQ02747 115 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 AAMPQ13685 434 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 LINC01559Q495D7 138 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 MPNDQ8N594 471 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 ANP32EQ9BTT0 268 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
FDFT1-216ENST00000529521 PLEKHG3A1L390 1219 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 HOXA2O43364 376 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 ADAM23O75077 832 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 ARHGEF15O94989 841 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 ZEB1P37275 1124 aaPredicted RBP4.02□□□□□ -1.77
FDFT1-216ENST00000529521 FOXK2Q01167 660 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 C6orf118Q5T5N4 469 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 TICAM2Q86XR7 235 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 SVOPQ8N4V2 548 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 WHAMMQ8TF30 809 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 BAP1Q92560 729 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 COL25A1Q9BXS0 654 aaPredicted RBP4.02□□□□□ -1.77
FDFT1-216ENST00000529521 ZFAND3Q9H8U3 227 aa4.02□□□□□ -1.77
FDFT1-216ENST00000529521 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 TESPA1A2RU30 521 aaPredicted RBP4.01□□□□□ -1.77
FDFT1-216ENST00000529521 CCNYL3P0C7X3 344 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 VARSP26640 1264 aaKnown RBP4.01□□□□□ -1.77
FDFT1-216ENST00000529521 USP46P62068 366 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 RNFT1Q5M7Z0 435 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 KANK3Q6NY19 840 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 RETREG3Q86VR2 466 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 UNC93B1Q9H1C4 597 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 DNMT3LQ9UJW3 386 aa4.01□□□□□ -1.77
FDFT1-216ENST00000529521 CLSTN1O94985 981 aa4□□□□□ -1.77
FDFT1-216ENST00000529521 ZIC2O95409 532 aaPredicted RBP4□□□□□ -1.77
FDFT1-216ENST00000529521 ZNF511Q8NB15 262 aa4□□□□□ -1.77
FDFT1-216ENST00000529521 ITPKCQ96DU7 683 aa4□□□□□ -1.77
FDFT1-216ENST00000529521 NAP1L5Q96NT1 182 aaPredicted RBP4□□□□□ -1.77
FDFT1-216ENST00000529521 GTF3C5Q9Y5Q8 519 aaPredicted RBP4□□□□□ -1.77
FDFT1-216ENST00000529521 SOS2Q07890 1332 aaPredicted RBP3.99□□□□□ -1.77
FDFT1-216ENST00000529521 CLSPNQ9HAW4 1339 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 SLURP2P0DP57 97 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 MS4A1P11836 297 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 BMP2P12643 396 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 PSMG3-AS1Q96PY0 264 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 EVA1BQ9NVM1 165 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 BRPF3Q9ULD4 1205 aa3.99□□□□□ -1.77
FDFT1-216ENST00000529521 ITGB2P05107 769 aa3.98□□□□□ -1.77
FDFT1-216ENST00000529521 NR3C2P08235 984 aa3.98□□□□□ -1.77
FDFT1-216ENST00000529521 MARSP56192 900 aaKnown RBP3.98□□□□□ -1.77
FDFT1-216ENST00000529521 PTPRNQ16849 979 aa3.98□□□□□ -1.77
FDFT1-216ENST00000529521 ERICH6BQ5W0A0 696 aa3.98□□□□□ -1.77
FDFT1-216ENST00000529521 LINC00528Q8N1L1 170 aa3.98□□□□□ -1.77
FDFT1-216ENST00000529521 NANOS1Q8WY41 292 aaKnown RBP3.98□□□□□ -1.77
FDFT1-216ENST00000529521 CDK15Q96Q40 435 aa3.98□□□□□ -1.77
FDFT1-216ENST00000529521 MSTNO14793 375 aa3.97□□□□□ -1.77
FDFT1-216ENST00000529521 IRX6P78412 446 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms