RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 HAP1P54257 671 aaPredicted RBP29.83■■■□□ 2.37
SMIM19-208ENST00000529505 ITSN1Q15811 1721 aa29.82■■■□□ 2.36
SMIM19-208ENST00000529505 LMOD2Q6P5Q4 547 aa29.82■■■□□ 2.36
SMIM19-208ENST00000529505 CDK19Q9BWU1 502 aa29.81■■■□□ 2.36
SMIM19-208ENST00000529505 CRYBG1Q9Y4K1 1723 aa29.78■■■□□ 2.36
SMIM19-208ENST00000529505 VPS72Q15906 364 aa29.77■■■□□ 2.36
SMIM19-208ENST00000529505 PLEKHG5O94827 1062 aa29.76■■■□□ 2.35
SMIM19-208ENST00000529505 NUDT16Q96DE0 195 aaKnown RBP29.76■■■□□ 2.35
SMIM19-208ENST00000529505 TOPAZ1Q8N9V7 1692 aa29.76■■■□□ 2.35
SMIM19-208ENST00000529505 NRAPQ86VF7 1730 aa29.75■■■□□ 2.35
SMIM19-208ENST00000529505 FAM83GA6ND36 823 aa29.74■■■□□ 2.35
SMIM19-208ENST00000529505 NGDNQ8NEJ9 315 aaKnown RBP29.74■■■□□ 2.35
SMIM19-208ENST00000529505 BRWD3Q6RI45 1802 aa29.73■■■□□ 2.35
SMIM19-208ENST00000529505 CCDC61Q9Y6R9 512 aa29.73■■■□□ 2.35
SMIM19-208ENST00000529505 COL14A1Q05707 1796 aaKnown RBP29.72■■■□□ 2.35
SMIM19-208ENST00000529505 EVC2Q86UK5 1308 aa29.71■■■□□ 2.35
SMIM19-208ENST00000529505 SBNO2Q9Y2G9 1366 aa29.69■■■□□ 2.34
SMIM19-208ENST00000529505 ONECUT3O60422 494 aaPredicted RBP29.69■■■□□ 2.34
SMIM19-208ENST00000529505 POLR3AO14802 1390 aaPredicted RBP29.68■■■□□ 2.34
SMIM19-208ENST00000529505 SRPK2P78362 688 aaKnown RBP29.68■■■□□ 2.34
SMIM19-208ENST00000529505 CCDC125Q86Z20 511 aa29.68■■■□□ 2.34
SMIM19-208ENST00000529505 PLEKHG3A1L390 1219 aa29.67■■■□□ 2.34
SMIM19-208ENST00000529505 SLC24A1O60721 1099 aa29.67■■■□□ 2.34
SMIM19-208ENST00000529505 SEPT12Q8IYM1 358 aa29.66■■■□□ 2.34
SMIM19-208ENST00000529505 PAK3O75914 559 aaPredicted RBP29.65■■■□□ 2.34
SMIM19-208ENST00000529505 CABP2Q9NPB3 220 aa29.65■■■□□ 2.34
SMIM19-208ENST00000529505 QRICH2Q9H0J4 1663 aa29.64■■■□□ 2.34
SMIM19-208ENST00000529505 BTG4Q9NY30 223 aa29.64■■■□□ 2.34
SMIM19-208ENST00000529505 PHRF1Q9P1Y6 1649 aaKnown RBP29.63■■■□□ 2.33
SMIM19-208ENST00000529505 CCDC9Q9Y3X0 531 aaKnown RBP29.63■■■□□ 2.33
SMIM19-208ENST00000529505 BLMP54132 1417 aaPredicted RBP29.62■■■□□ 2.33
SMIM19-208ENST00000529505 ACEP12821 1306 aa29.61■■■□□ 2.33
SMIM19-208ENST00000529505 ST20-MTHFSA0A0A6YYL1 179 aa29.59■■■□□ 2.33
SMIM19-208ENST00000529505 PUS7Q96PZ0 661 aaKnown RBP29.58■■■□□ 2.33
SMIM19-208ENST00000529505 TESK2Q96S53 571 aa29.57■■■□□ 2.32
SMIM19-208ENST00000529505 PRDM11Q9NQV5 511 aa29.56■■■□□ 2.32
SMIM19-208ENST00000529505 KIAA0232Q92628 1395 aa29.55■■■□□ 2.32
SMIM19-208ENST00000529505 KRT27Q7Z3Y8 459 aa29.55■■■□□ 2.32
SMIM19-208ENST00000529505 USP47Q96K76 1375 aa29.54■■■□□ 2.32
SMIM19-208ENST00000529505 SPATA31A5Q5VU36 1347 aa29.54■■■□□ 2.32
SMIM19-208ENST00000529505 SPATA31A7Q8IWB4 1347 aa29.54■■■□□ 2.32
SMIM19-208ENST00000529505 CABP1Q9NZU7 370 aa29.54■■■□□ 2.32
SMIM19-208ENST00000529505 PPIP5K1Q6PFW1 1433 aa29.54■■■□□ 2.32
SMIM19-208ENST00000529505 NRKQ7Z2Y5 1582 aa29.53■■■□□ 2.32
SMIM19-208ENST00000529505 FAM98CQ17RN3 349 aaKnown RBP29.53■■■□□ 2.32
SMIM19-208ENST00000529505 SRCAPQ6ZRS2 3230 aa29.53■■■□□ 2.32
SMIM19-208ENST00000529505 THSD7AQ9UPZ6 1657 aa29.52■■■□□ 2.32
SMIM19-208ENST00000529505 NUTM2GQ5VZR2 741 aa29.5■■■□□ 2.31
SMIM19-208ENST00000529505 USP19O94966 1318 aa29.49■■■□□ 2.31
SMIM19-208ENST00000529505 ZRANB1Q9UGI0 708 aa29.49■■■□□ 2.31
SMIM19-208ENST00000529505 ZNF692Q9BU19 519 aaPredicted RBP29.48■■■□□ 2.31
SMIM19-208ENST00000529505 BRD4O60885 1362 aaPredicted RBP29.48■■■□□ 2.31
SMIM19-208ENST00000529505 CHRNA2Q15822 529 aa29.47■■■□□ 2.31
SMIM19-208ENST00000529505 A0A0G2JS52 829 aa29.46■■■□□ 2.31
SMIM19-208ENST00000529505 ZC3H6P61129 1189 aaKnown RBP29.46■■■□□ 2.31
SMIM19-208ENST00000529505 MYT1Q01538 1121 aa29.46■■■□□ 2.31
SMIM19-208ENST00000529505 ABTB2Q8N961 1025 aa29.46■■■□□ 2.31
SMIM19-208ENST00000529505 CPDO75976 1380 aa29.45■■■□□ 2.31
SMIM19-208ENST00000529505 DEFB132Q7Z7B7 95 aa29.45■■■□□ 2.31
SMIM19-208ENST00000529505 SPATA31A1Q5TZJ5 1347 aa29.45■■■□□ 2.3
SMIM19-208ENST00000529505 LMO7Q8WWI1 1683 aa29.44■■■□□ 2.3
SMIM19-208ENST00000529505 TMF1P82094 1093 aa29.43■■■□□ 2.3
SMIM19-208ENST00000529505 USP6P35125 1406 aa29.43■■■□□ 2.3
SMIM19-208ENST00000529505 SF3B2Q13435 895 aaKnown RBP29.42■■■□□ 2.3
SMIM19-208ENST00000529505 CAMTA1Q9Y6Y1 1673 aa29.41■■■□□ 2.3
SMIM19-208ENST00000529505 SSH2Q76I76 1423 aa29.4■■■□□ 2.3
SMIM19-208ENST00000529505 CDCA8Q53HL2 280 aa29.4■■■□□ 2.3
SMIM19-208ENST00000529505 EIF4G2P78344 907 aaKnown RBP eCLIP29.39■■■□□ 2.3
SMIM19-208ENST00000529505 NLRP13Q86W25 1043 aa29.39■■■□□ 2.3
SMIM19-208ENST00000529505 STRN4Q9NRL3 753 aa29.39■■■□□ 2.3
SMIM19-208ENST00000529505 RGPD1P0DJD0 1748 aa29.37■■■□□ 2.29
SMIM19-208ENST00000529505 CPSF1Q10570 1443 aaKnown RBP29.37■■■□□ 2.29
SMIM19-208ENST00000529505 GCP02774 474 aa29.36■■■□□ 2.29
SMIM19-208ENST00000529505 NINLQ9Y2I6 1382 aa29.36■■■□□ 2.29
SMIM19-208ENST00000529505 SLIT3O75094 1523 aa29.35■■■□□ 2.29
SMIM19-208ENST00000529505 TMC1Q8TDI8 760 aa29.35■■■□□ 2.29
SMIM19-208ENST00000529505 SLC12A5Q9H2X9 1139 aa29.35■■■□□ 2.29
SMIM19-208ENST00000529505 PIK3C2AO00443 1686 aa29.34■■■□□ 2.29
SMIM19-208ENST00000529505 FAM182BQ5T319 152 aa29.33■■■□□ 2.29
SMIM19-208ENST00000529505 BARGINQ6ZT62 677 aa29.33■■■□□ 2.29
SMIM19-208ENST00000529505 TERF2IPQ9NYB0 399 aa29.33■■■□□ 2.29
SMIM19-208ENST00000529505 TNS1Q9HBL0 1735 aaKnown RBP29.33■■■□□ 2.29
SMIM19-208ENST00000529505 AKAP12Q02952 1782 aa29.32■■■□□ 2.28
SMIM19-208ENST00000529505 BAG6P46379 1132 aa29.32■■■□□ 2.28
SMIM19-208ENST00000529505 EVA1CP58658 441 aa29.31■■■□□ 2.28
SMIM19-208ENST00000529505 HDGFL2Q7Z4V5 671 aaPredicted RBP29.31■■■□□ 2.28
SMIM19-208ENST00000529505 COL5A2P05997 1499 aaPredicted RBP29.3■■■□□ 2.28
SMIM19-208ENST00000529505 DISP2A7MBM2 1401 aa29.3■■■□□ 2.28
SMIM19-208ENST00000529505 LARP1Q6PKG0 1096 aaKnown RBP29.3■■■□□ 2.28
SMIM19-208ENST00000529505 KTN1Q86UP2 1357 aaKnown RBP29.29■■■□□ 2.28
SMIM19-208ENST00000529505 TTC21BQ7Z4L5 1316 aa29.29■■■□□ 2.28
SMIM19-208ENST00000529505 TTC21AQ8NDW8 1320 aa29.29■■■□□ 2.28
SMIM19-208ENST00000529505 HSPA5P11021 654 aaKnown RBP29.29■■■□□ 2.28
SMIM19-208ENST00000529505 NLRP6P59044 892 aa29.28■■■□□ 2.28
SMIM19-208ENST00000529505 USP35Q9P2H5 1018 aa29.27■■■□□ 2.28
SMIM19-208ENST00000529505 CD163L1Q9NR16 1453 aa29.26■■■□□ 2.27
SMIM19-208ENST00000529505 TCP11L2Q8N4U5 519 aa29.26■■■□□ 2.27
SMIM19-208ENST00000529505 AATKQ6ZMQ8 1374 aa29.26■■■□□ 2.27
SMIM19-208ENST00000529505 COL18A1P39060 1754 aa29.25■■■□□ 2.27
SMIM19-208ENST00000529505 THRAP3Q9Y2W1 955 aaKnown RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms