RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
SSH3-206ENST00000529224 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
SSH3-206ENST00000529224 NWD2Q9ULI1 1742 aa18.7■□□□□ 0.58
SSH3-206ENST00000529224 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
SSH3-206ENST00000529224 NBPF8Q3BBV2 869 aa18.68■□□□□ 0.58
SSH3-206ENST00000529224 CRYBG1Q9Y4K1 1723 aa18.68■□□□□ 0.58
SSH3-206ENST00000529224 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
SSH3-206ENST00000529224 SRPK2P78362 688 aaKnown RBP18.67■□□□□ 0.58
SSH3-206ENST00000529224 POLR3AO14802 1390 aaPredicted RBP18.67■□□□□ 0.58
SSH3-206ENST00000529224 NRAPQ86VF7 1730 aa18.66■□□□□ 0.58
SSH3-206ENST00000529224 BRWD3Q6RI45 1802 aa18.66■□□□□ 0.58
SSH3-206ENST00000529224 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
SSH3-206ENST00000529224 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
SSH3-206ENST00000529224 VPS72Q15906 364 aa18.66■□□□□ 0.58
SSH3-206ENST00000529224 ACEP12821 1306 aa18.65■□□□□ 0.58
SSH3-206ENST00000529224 EVC2Q86UK5 1308 aa18.64■□□□□ 0.57
SSH3-206ENST00000529224 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
SSH3-206ENST00000529224 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
SSH3-206ENST00000529224 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
SSH3-206ENST00000529224 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
SSH3-206ENST00000529224 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
SSH3-206ENST00000529224 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
SSH3-206ENST00000529224 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
SSH3-206ENST00000529224 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
SSH3-206ENST00000529224 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
SSH3-206ENST00000529224 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
SSH3-206ENST00000529224 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
SSH3-206ENST00000529224 AKAP12Q02952 1782 aa18.58■□□□□ 0.57
SSH3-206ENST00000529224 CCDC125Q86Z20 511 aa18.58■□□□□ 0.56
SSH3-206ENST00000529224 BRD4O60885 1362 aaPredicted RBP18.57■□□□□ 0.56
SSH3-206ENST00000529224 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
SSH3-206ENST00000529224 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
SSH3-206ENST00000529224 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
SSH3-206ENST00000529224 NUTM2GQ5VZR2 741 aa18.55■□□□□ 0.56
SSH3-206ENST00000529224 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
SSH3-206ENST00000529224 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
SSH3-206ENST00000529224 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
SSH3-206ENST00000529224 PRDM11Q9NQV5 511 aa18.54■□□□□ 0.56
SSH3-206ENST00000529224 USP6P35125 1406 aa18.54■□□□□ 0.56
SSH3-206ENST00000529224 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
SSH3-206ENST00000529224 KRT27Q7Z3Y8 459 aa18.53■□□□□ 0.56
SSH3-206ENST00000529224 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
SSH3-206ENST00000529224 SPATA31A5Q5VU36 1347 aa18.52■□□□□ 0.56
SSH3-206ENST00000529224 SPATA31A7Q8IWB4 1347 aa18.52■□□□□ 0.56
SSH3-206ENST00000529224 NRKQ7Z2Y5 1582 aa18.52■□□□□ 0.56
SSH3-206ENST00000529224 CHRNA2Q15822 529 aa18.52■□□□□ 0.56
SSH3-206ENST00000529224 THSD7AQ9UPZ6 1657 aa18.51■□□□□ 0.55
SSH3-206ENST00000529224 A0A0G2JS52 829 aa18.51■□□□□ 0.55
SSH3-206ENST00000529224 MYT1Q01538 1121 aa18.51■□□□□ 0.55
SSH3-206ENST00000529224 DEFB132Q7Z7B7 95 aa18.51■□□□□ 0.55
SSH3-206ENST00000529224 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
SSH3-206ENST00000529224 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
SSH3-206ENST00000529224 ZC3H6P61129 1189 aaKnown RBP18.5■□□□□ 0.55
SSH3-206ENST00000529224 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
SSH3-206ENST00000529224 USP19O94966 1318 aa18.49■□□□□ 0.55
SSH3-206ENST00000529224 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
SSH3-206ENST00000529224 PIK3C2AO00443 1686 aa18.49■□□□□ 0.55
SSH3-206ENST00000529224 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
SSH3-206ENST00000529224 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
SSH3-206ENST00000529224 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
SSH3-206ENST00000529224 SPATA31A1Q5TZJ5 1347 aa18.47■□□□□ 0.55
SSH3-206ENST00000529224 CPDO75976 1380 aa18.46■□□□□ 0.55
SSH3-206ENST00000529224 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
SSH3-206ENST00000529224 FAM182BQ5T319 152 aa18.46■□□□□ 0.55
SSH3-206ENST00000529224 CAMTA1Q9Y6Y1 1673 aa18.46■□□□□ 0.55
SSH3-206ENST00000529224 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
SSH3-206ENST00000529224 GCP02774 474 aa18.45■□□□□ 0.54
SSH3-206ENST00000529224 NLRP6P59044 892 aa18.45■□□□□ 0.54
SSH3-206ENST00000529224 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
SSH3-206ENST00000529224 STRN4Q9NRL3 753 aa18.45■□□□□ 0.54
SSH3-206ENST00000529224 SLIT3O75094 1523 aa18.44■□□□□ 0.54
SSH3-206ENST00000529224 KTN1Q86UP2 1357 aaKnown RBP18.44■□□□□ 0.54
SSH3-206ENST00000529224 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
SSH3-206ENST00000529224 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
SSH3-206ENST00000529224 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
SSH3-206ENST00000529224 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
SSH3-206ENST00000529224 TESK2Q96S53 571 aa18.42■□□□□ 0.54
SSH3-206ENST00000529224 USP47Q96K76 1375 aa18.42■□□□□ 0.54
SSH3-206ENST00000529224 RGPD1P0DJD0 1748 aa18.41■□□□□ 0.54
SSH3-206ENST00000529224 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
SSH3-206ENST00000529224 EVA1CP58658 441 aa18.4■□□□□ 0.54
SSH3-206ENST00000529224 LARP1Q6PKG0 1096 aaKnown RBP18.4■□□□□ 0.54
SSH3-206ENST00000529224 HDGFL2Q7Z4V5 671 aaPredicted RBP18.4■□□□□ 0.54
SSH3-206ENST00000529224 USP35Q9P2H5 1018 aa18.4■□□□□ 0.54
SSH3-206ENST00000529224 USP54Q70EL1 1684 aa18.4■□□□□ 0.54
SSH3-206ENST00000529224 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
SSH3-206ENST00000529224 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.54
SSH3-206ENST00000529224 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
SSH3-206ENST00000529224 COL18A1P39060 1754 aa18.39■□□□□ 0.53
SSH3-206ENST00000529224 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
SSH3-206ENST00000529224 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
SSH3-206ENST00000529224 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
SSH3-206ENST00000529224 COL5A2P05997 1499 aaPredicted RBP18.38■□□□□ 0.53
SSH3-206ENST00000529224 BAG6P46379 1132 aa18.37■□□□□ 0.53
SSH3-206ENST00000529224 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
SSH3-206ENST00000529224 EDC4Q6P2E9 1401 aaKnown RBP18.36■□□□□ 0.53
SSH3-206ENST00000529224 AATKQ6ZMQ8 1374 aa18.36■□□□□ 0.53
SSH3-206ENST00000529224 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
SSH3-206ENST00000529224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.36■□□□□ 0.53
SSH3-206ENST00000529224 DISP2A7MBM2 1401 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms