RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 UPF1Q92900 1129 aaKnown RBP eCLIP19.34■□□□□ 0.69
SNRNP35-205ENST00000529201 RNF216Q9NWF9 866 aaPredicted RBP19.34■□□□□ 0.69
SNRNP35-205ENST00000529201 TOPAZ1Q8N9V7 1692 aa19.33■□□□□ 0.68
SNRNP35-205ENST00000529201 NWD2Q9ULI1 1742 aa19.32■□□□□ 0.68
SNRNP35-205ENST00000529201 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
SNRNP35-205ENST00000529201 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
SNRNP35-205ENST00000529201 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
SNRNP35-205ENST00000529201 GJD4Q96KN9 370 aaPredicted RBP19.31■□□□□ 0.68
SNRNP35-205ENST00000529201 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
SNRNP35-205ENST00000529201 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
SNRNP35-205ENST00000529201 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
SNRNP35-205ENST00000529201 PLCH1Q4KWH8 1693 aa19.28■□□□□ 0.68
SNRNP35-205ENST00000529201 SRPK2P78362 688 aaKnown RBP19.28■□□□□ 0.68
SNRNP35-205ENST00000529201 ACEP12821 1306 aa19.27■□□□□ 0.68
SNRNP35-205ENST00000529201 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
SNRNP35-205ENST00000529201 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.68
SNRNP35-205ENST00000529201 ATAD2Q6PL18 1390 aa19.27■□□□□ 0.68
SNRNP35-205ENST00000529201 VPS72Q15906 364 aa19.26■□□□□ 0.67
SNRNP35-205ENST00000529201 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
SNRNP35-205ENST00000529201 COL14A1Q05707 1796 aaKnown RBP19.25■□□□□ 0.67
SNRNP35-205ENST00000529201 RALGAPBQ86X10 1494 aa19.25■□□□□ 0.67
SNRNP35-205ENST00000529201 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
SNRNP35-205ENST00000529201 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
SNRNP35-205ENST00000529201 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
SNRNP35-205ENST00000529201 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
SNRNP35-205ENST00000529201 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
SNRNP35-205ENST00000529201 CABP2Q9NPB3 220 aa19.23■□□□□ 0.67
SNRNP35-205ENST00000529201 GLI3P10071 1580 aa19.23■□□□□ 0.67
SNRNP35-205ENST00000529201 ONECUT3O60422 494 aaPredicted RBP19.21■□□□□ 0.67
SNRNP35-205ENST00000529201 CCDC125Q86Z20 511 aa19.2■□□□□ 0.66
SNRNP35-205ENST00000529201 BTG4Q9NY30 223 aa19.2■□□□□ 0.66
SNRNP35-205ENST00000529201 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
SNRNP35-205ENST00000529201 ABTB2Q8N961 1025 aa19.19■□□□□ 0.66
SNRNP35-205ENST00000529201 CCDC9Q9Y3X0 531 aaKnown RBP19.19■□□□□ 0.66
SNRNP35-205ENST00000529201 PHRF1Q9P1Y6 1649 aaKnown RBP19.18■□□□□ 0.66
SNRNP35-205ENST00000529201 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
SNRNP35-205ENST00000529201 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
SNRNP35-205ENST00000529201 SBNO2Q9Y2G9 1366 aa19.18■□□□□ 0.66
SNRNP35-205ENST00000529201 NLRP13Q86W25 1043 aa19.17■□□□□ 0.66
SNRNP35-205ENST00000529201 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
SNRNP35-205ENST00000529201 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
SNRNP35-205ENST00000529201 RNF39Q9H2S5 420 aa19.17■□□□□ 0.66
SNRNP35-205ENST00000529201 SEPT12Q8IYM1 358 aa19.15■□□□□ 0.66
SNRNP35-205ENST00000529201 USP19O94966 1318 aa19.15■□□□□ 0.66
SNRNP35-205ENST00000529201 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
SNRNP35-205ENST00000529201 USP6P35125 1406 aa19.15■□□□□ 0.66
SNRNP35-205ENST00000529201 BRWD3Q6RI45 1802 aa19.14■□□□□ 0.65
SNRNP35-205ENST00000529201 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
SNRNP35-205ENST00000529201 CPDO75976 1380 aa19.13■□□□□ 0.65
SNRNP35-205ENST00000529201 SPATA31A5Q5VU36 1347 aa19.12■□□□□ 0.65
SNRNP35-205ENST00000529201 SPATA31A7Q8IWB4 1347 aa19.12■□□□□ 0.65
SNRNP35-205ENST00000529201 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
SNRNP35-205ENST00000529201 NRKQ7Z2Y5 1582 aa19.11■□□□□ 0.65
SNRNP35-205ENST00000529201 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
SNRNP35-205ENST00000529201 SSH2Q76I76 1423 aa19.1■□□□□ 0.65
SNRNP35-205ENST00000529201 GCP02774 474 aa19.1■□□□□ 0.65
SNRNP35-205ENST00000529201 KRT27Q7Z3Y8 459 aa19.1■□□□□ 0.65
SNRNP35-205ENST00000529201 AKAP12Q02952 1782 aa19.1■□□□□ 0.65
SNRNP35-205ENST00000529201 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
SNRNP35-205ENST00000529201 NLRP6P59044 892 aa19.08■□□□□ 0.64
SNRNP35-205ENST00000529201 CHRNA2Q15822 529 aa19.08■□□□□ 0.64
SNRNP35-205ENST00000529201 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
SNRNP35-205ENST00000529201 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.64
SNRNP35-205ENST00000529201 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
SNRNP35-205ENST00000529201 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
SNRNP35-205ENST00000529201 SPATA31A1Q5TZJ5 1347 aa19.06■□□□□ 0.64
SNRNP35-205ENST00000529201 SLIT3O75094 1523 aa19.06■□□□□ 0.64
SNRNP35-205ENST00000529201 A0A0G2JS52 829 aa19.06■□□□□ 0.64
SNRNP35-205ENST00000529201 EVA1CP58658 441 aa19.06■□□□□ 0.64
SNRNP35-205ENST00000529201 MYT1Q01538 1121 aa19.06■□□□□ 0.64
SNRNP35-205ENST00000529201 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
SNRNP35-205ENST00000529201 TTC21BQ7Z4L5 1316 aa19.05■□□□□ 0.64
SNRNP35-205ENST00000529201 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
SNRNP35-205ENST00000529201 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
SNRNP35-205ENST00000529201 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-205ENST00000529201 PIK3C2AO00443 1686 aa19.05■□□□□ 0.64
SNRNP35-205ENST00000529201 THSD7AQ9UPZ6 1657 aa19.05■□□□□ 0.64
SNRNP35-205ENST00000529201 SF3B2Q13435 895 aaKnown RBP19.04■□□□□ 0.64
SNRNP35-205ENST00000529201 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
SNRNP35-205ENST00000529201 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
SNRNP35-205ENST00000529201 CAMTA1Q9Y6Y1 1673 aa19.04■□□□□ 0.64
SNRNP35-205ENST00000529201 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
SNRNP35-205ENST00000529201 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
SNRNP35-205ENST00000529201 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
SNRNP35-205ENST00000529201 THRAP3Q9Y2W1 955 aaKnown RBP19.02■□□□□ 0.64
SNRNP35-205ENST00000529201 AATKQ6ZMQ8 1374 aa19.02■□□□□ 0.64
SNRNP35-205ENST00000529201 EP400Q96L91 3159 aa19.01■□□□□ 0.63
SNRNP35-205ENST00000529201 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
SNRNP35-205ENST00000529201 NINLQ9Y2I6 1382 aa18.99■□□□□ 0.63
SNRNP35-205ENST00000529201 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
SNRNP35-205ENST00000529201 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
SNRNP35-205ENST00000529201 COL5A2P05997 1499 aaPredicted RBP18.98■□□□□ 0.63
SNRNP35-205ENST00000529201 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
SNRNP35-205ENST00000529201 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
SNRNP35-205ENST00000529201 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
SNRNP35-205ENST00000529201 TESK2Q96S53 571 aa18.98■□□□□ 0.63
SNRNP35-205ENST00000529201 ZRANB1Q9UGI0 708 aa18.98■□□□□ 0.63
SNRNP35-205ENST00000529201 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
SNRNP35-205ENST00000529201 USP54Q70EL1 1684 aa18.97■□□□□ 0.63
SNRNP35-205ENST00000529201 CRB1P82279 1406 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms