RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TOR4AQ9NXH8 423 aa10.1□□□□□ -0.79
CSDE1-212ENST00000529046 TTC24A2A3L6 582 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-212ENST00000529046 PER1O15534 1290 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-212ENST00000529046 RC3H1Q5TC82 1133 aaKnown RBP10.09□□□□□ -0.79
CSDE1-212ENST00000529046 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-212ENST00000529046 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSDE1-212ENST00000529046 F12P00748 615 aaPredicted RBP10.08□□□□□ -0.8
CSDE1-212ENST00000529046 MAP10Q9P2G4 905 aa10.08□□□□□ -0.8
CSDE1-212ENST00000529046 SH3BP2P78314 561 aa10.07□□□□□ -0.8
CSDE1-212ENST00000529046 LINC01559Q495D7 138 aa10.07□□□□□ -0.8
CSDE1-212ENST00000529046 SNIP1Q8TAD8 396 aaKnown RBP10.07□□□□□ -0.8
CSDE1-212ENST00000529046 BAP1Q92560 729 aa10.06□□□□□ -0.8
CSDE1-212ENST00000529046 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
CSDE1-212ENST00000529046 MYT1Q01538 1121 aa10.04□□□□□ -0.8
CSDE1-212ENST00000529046 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
CSDE1-212ENST00000529046 ZNF511Q8NB15 262 aa10.04□□□□□ -0.8
CSDE1-212ENST00000529046 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
CSDE1-212ENST00000529046 CTDSPL2Q05D32 466 aa10.02□□□□□ -0.81
CSDE1-212ENST00000529046 PCMTD1Q96MG8 357 aaPredicted RBP10.02□□□□□ -0.81
CSDE1-212ENST00000529046 J3QL48 77 aa10.01□□□□□ -0.81
CSDE1-212ENST00000529046 SMPD1P17405 629 aa10.01□□□□□ -0.81
CSDE1-212ENST00000529046 ARMC2Q8NEN0 867 aa10□□□□□ -0.81
CSDE1-212ENST00000529046 SIAH2O43255 324 aa9.99□□□□□ -0.81
CSDE1-212ENST00000529046 AP1G2O75843 785 aa9.99□□□□□ -0.81
CSDE1-212ENST00000529046 ALDH1A1P00352 501 aa9.99□□□□□ -0.81
CSDE1-212ENST00000529046 AVPP01185 164 aa9.99□□□□□ -0.81
CSDE1-212ENST00000529046 VARSP26640 1264 aaKnown RBP9.98□□□□□ -0.81
CSDE1-212ENST00000529046 LRRN4Q8WUT4 740 aa9.98□□□□□ -0.81
CSDE1-212ENST00000529046 ST8SIA5O15466 376 aa9.97□□□□□ -0.81
CSDE1-212ENST00000529046 RFC5P40937 340 aa9.97□□□□□ -0.81
CSDE1-212ENST00000529046 AGERQ15109 404 aa9.97□□□□□ -0.81
CSDE1-212ENST00000529046 CTC1Q2NKJ3 1217 aa9.97□□□□□ -0.81
CSDE1-212ENST00000529046 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
CSDE1-212ENST00000529046 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
CSDE1-212ENST00000529046 CRIPAKQ8N1N5 446 aa9.96□□□□□ -0.82
CSDE1-212ENST00000529046 FOXJ1Q92949 421 aa9.96□□□□□ -0.82
CSDE1-212ENST00000529046 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.82
CSDE1-212ENST00000529046 BPHLQ86WA6 291 aaPredicted RBP9.95□□□□□ -0.82
CSDE1-212ENST00000529046 GTF3C3Q9Y5Q9 886 aa9.95□□□□□ -0.82
CSDE1-212ENST00000529046 WASF2Q9Y6W5 498 aa9.95□□□□□ -0.82
CSDE1-212ENST00000529046 AXIN1O15169 862 aa9.94□□□□□ -0.82
CSDE1-212ENST00000529046 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
CSDE1-212ENST00000529046 FAM174AQ8TBP5 190 aa9.94□□□□□ -0.82
CSDE1-212ENST00000529046 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
CSDE1-212ENST00000529046 HPS1Q92902 700 aa9.93□□□□□ -0.82
CSDE1-212ENST00000529046 NR6A1Q15406 480 aa9.92□□□□□ -0.82
CSDE1-212ENST00000529046 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
CSDE1-212ENST00000529046 ZNF787Q6DD87 383 aa9.92□□□□□ -0.82
CSDE1-212ENST00000529046 GPKOWQ92917 476 aaPredicted RBP eCLIP9.92□□□□□ -0.821e-7■□□□□ 10.5
CSDE1-212ENST00000529046 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
CSDE1-212ENST00000529046 MPNDQ8N594 471 aa9.91□□□□□ -0.82
CSDE1-212ENST00000529046 FKBPLQ9UIM3 349 aa9.91□□□□□ -0.82
CSDE1-212ENST00000529046 SH3BP5LQ7L8J4 393 aa9.9□□□□□ -0.82
CSDE1-212ENST00000529046 SH3RF1Q7Z6J0 888 aa9.9□□□□□ -0.82
CSDE1-212ENST00000529046 HMX1Q9NP08 348 aaPredicted RBP9.89□□□□□ -0.83
CSDE1-212ENST00000529046 ZC3H4Q9UPT8 1303 aaKnown RBP9.88□□□□□ -0.83
CSDE1-212ENST00000529046 MAGEB6P1A0A0J9YX57 407 aa9.88□□□□□ -0.83
CSDE1-212ENST00000529046 ARID5BQ14865 1188 aa9.88□□□□□ -0.83
CSDE1-212ENST00000529046 DACH1Q9UI36 760 aa9.88□□□□□ -0.83
CSDE1-212ENST00000529046 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
CSDE1-212ENST00000529046 PNMA1Q8ND90 353 aa9.87□□□□□ -0.83
CSDE1-212ENST00000529046 EPS8L1Q8TE68 723 aa9.87□□□□□ -0.83
CSDE1-212ENST00000529046 CDK15Q96Q40 435 aa9.87□□□□□ -0.83
CSDE1-212ENST00000529046 C1QTNF2Q9BXJ5 285 aa9.87□□□□□ -0.83
CSDE1-212ENST00000529046 ADH1CP00326 375 aa9.86□□□□□ -0.83
CSDE1-212ENST00000529046 NNTQ13423 1086 aa9.86□□□□□ -0.83
CSDE1-212ENST00000529046 CARD14Q9BXL6 1004 aa9.86□□□□□ -0.83
CSDE1-212ENST00000529046 ARHGAP9Q9BRR9 750 aa9.85□□□□□ -0.83
CSDE1-212ENST00000529046 POTECB2RU33 542 aa9.84□□□□□ -0.83
CSDE1-212ENST00000529046 SOCS7O14512 581 aa9.84□□□□□ -0.83
CSDE1-212ENST00000529046 TRMT44Q8IYL2 757 aaKnown RBP9.84□□□□□ -0.83
CSDE1-212ENST00000529046 ATP13A2Q9NQ11 1180 aa9.84□□□□□ -0.83
CSDE1-212ENST00000529046 CAPN5O15484 640 aaPredicted RBP9.83□□□□□ -0.84
CSDE1-212ENST00000529046 PTK2Q05397 1052 aa9.83□□□□□ -0.84
CSDE1-212ENST00000529046 ERFEQ4G0M1 354 aa9.83□□□□□ -0.84
CSDE1-212ENST00000529046 BANK1Q8NDB2 785 aa9.83□□□□□ -0.84
CSDE1-212ENST00000529046 NR5A1Q13285 461 aa9.82□□□□□ -0.84
CSDE1-212ENST00000529046 VASH1Q7L8A9 365 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-212ENST00000529046 ZBTB33Q86T24 672 aa9.82□□□□□ -0.84
CSDE1-212ENST00000529046 TRIM34Q9BYJ4 488 aa9.82□□□□□ -0.84
CSDE1-212ENST00000529046 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
CSDE1-212ENST00000529046 GPSM3Q9Y4H4 160 aa9.82□□□□□ -0.84
CSDE1-212ENST00000529046 MAP4K5Q9Y4K4 846 aa9.82□□□□□ -0.84
CSDE1-212ENST00000529046 FSHRP23945 695 aa9.8□□□□□ -0.84
CSDE1-212ENST00000529046 GRM5P41594 1212 aa9.8□□□□□ -0.84
CSDE1-212ENST00000529046 WDR4P57081 412 aaKnown RBP9.8□□□□□ -0.84
CSDE1-212ENST00000529046 SLC10A4Q96EP9 437 aa9.8□□□□□ -0.84
CSDE1-212ENST00000529046 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-212ENST00000529046 NR3C2P08235 984 aa9.78□□□□□ -0.84
CSDE1-212ENST00000529046 TIMP2P16035 220 aa9.78□□□□□ -0.84
CSDE1-212ENST00000529046 FLIIQ13045 1269 aa9.78□□□□□ -0.84
CSDE1-212ENST00000529046 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
CSDE1-212ENST00000529046 GJD4Q96KN9 370 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-212ENST00000529046 OCSTAMPQ9BR26 566 aa9.78□□□□□ -0.84
CSDE1-212ENST00000529046 SENP2Q9HC62 589 aa9.78□□□□□ -0.84
CSDE1-212ENST00000529046 BMP1P13497 986 aa9.77□□□□□ -0.85
CSDE1-212ENST00000529046 MCM6Q14566 821 aa9.77□□□□□ -0.85
CSDE1-212ENST00000529046 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-212ENST00000529046 CDV3Q9UKY7 258 aaKnown RBP9.77□□□□□ -0.85
CSDE1-212ENST00000529046 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms