RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 NPC1L1Q9UHC9 1359 aa33.67■■■□□ 2.98
LDLRAD3-203ENST00000528989 PAK3O75914 559 aaPredicted RBP33.67■■■□□ 2.98
LDLRAD3-203ENST00000528989 CERKQ8TCT0 537 aa33.67■■■□□ 2.98
LDLRAD3-203ENST00000528989 KRT28Q7Z3Y7 464 aa33.65■■■□□ 2.98
LDLRAD3-203ENST00000528989 PARD3Q8TEW0 1356 aa33.64■■■□□ 2.98
LDLRAD3-203ENST00000528989 TNNT2P45379 298 aaPredicted RBP33.63■■■□□ 2.97
LDLRAD3-203ENST00000528989 RALBP1Q15311 655 aa33.62■■■□□ 2.97
LDLRAD3-203ENST00000528989 NRKQ7Z2Y5 1582 aa33.62■■■□□ 2.97
LDLRAD3-203ENST00000528989 MORC1Q86VD1 984 aa33.61■■■□□ 2.97
LDLRAD3-203ENST00000528989 KIF1AQ12756 1690 aa33.61■■■□□ 2.97
LDLRAD3-203ENST00000528989 NPHP3Q7Z494 1330 aa33.6■■■□□ 2.97
LDLRAD3-203ENST00000528989 NUTM2GQ5VZR2 741 aa33.6■■■□□ 2.97
LDLRAD3-203ENST00000528989 TOM1O60784 492 aa33.59■■■□□ 2.97
LDLRAD3-203ENST00000528989 TTC21AQ8NDW8 1320 aa33.58■■■□□ 2.97
LDLRAD3-203ENST00000528989 UBAP1LF5GYI3 381 aa33.58■■■□□ 2.97
LDLRAD3-203ENST00000528989 PIP4K2BP78356 416 aa33.58■■■□□ 2.97
LDLRAD3-203ENST00000528989 ABTB2Q8N961 1025 aa33.58■■■□□ 2.97
LDLRAD3-203ENST00000528989 NSD2O96028 1365 aa33.57■■■□□ 2.96
LDLRAD3-203ENST00000528989 FBLN1P23142 703 aa33.56■■■□□ 2.96
LDLRAD3-203ENST00000528989 CCDC184Q52MB2 194 aa33.55■■■□□ 2.96
LDLRAD3-203ENST00000528989 LMOD2Q6P5Q4 547 aa33.54■■■□□ 2.96
LDLRAD3-203ENST00000528989 NLRP6P59044 892 aa33.53■■■□□ 2.96
LDLRAD3-203ENST00000528989 COG3Q96JB2 828 aa33.53■■■□□ 2.96
LDLRAD3-203ENST00000528989 PPP2R1AP30153 589 aa33.52■■■□□ 2.96
LDLRAD3-203ENST00000528989 MYBBP1AQ9BQG0 1328 aaKnown RBP33.52■■■□□ 2.96
LDLRAD3-203ENST00000528989 SCAF1Q9H7N4 1312 aaKnown RBP33.52■■■□□ 2.96
LDLRAD3-203ENST00000528989 BRD4O60885 1362 aaPredicted RBP33.51■■■□□ 2.96
LDLRAD3-203ENST00000528989 PXDNQ92626 1479 aa33.51■■■□□ 2.95
LDLRAD3-203ENST00000528989 KIF20BQ96Q89 1820 aa33.51■■■□□ 2.95
LDLRAD3-203ENST00000528989 ROBO1Q9Y6N7 1651 aa33.5■■■□□ 2.95
LDLRAD3-203ENST00000528989 IQSEC2Q5JU85 1478 aa33.49■■■□□ 2.95
LDLRAD3-203ENST00000528989 PLEKHG5O94827 1062 aa33.49■■■□□ 2.95
LDLRAD3-203ENST00000528989 SOS2Q07890 1332 aaPredicted RBP33.49■■■□□ 2.95
LDLRAD3-203ENST00000528989 PIK3C2AO00443 1686 aa33.48■■■□□ 2.95
LDLRAD3-203ENST00000528989 TRPM3Q9HCF6 1732 aaPredicted RBP33.47■■■□□ 2.95
LDLRAD3-203ENST00000528989 OVOS2A0A0J9YW53 1432 aa33.46■■■□□ 2.95
LDLRAD3-203ENST00000528989 OVOS2Q6IE36 1432 aa33.46■■■□□ 2.95
LDLRAD3-203ENST00000528989 SOX12O15370 315 aa33.46■■■□□ 2.95
LDLRAD3-203ENST00000528989 USP31Q70CQ4 1352 aa33.45■■■□□ 2.95
LDLRAD3-203ENST00000528989 SBNO1A3KN83 1393 aa33.44■■■□□ 2.94
LDLRAD3-203ENST00000528989 SPATA31A3Q5VYP0 1347 aa33.44■■■□□ 2.94
LDLRAD3-203ENST00000528989 CCER2I3L3R5 266 aa33.44■■■□□ 2.94
LDLRAD3-203ENST00000528989 NLRP13Q86W25 1043 aa33.42■■■□□ 2.94
LDLRAD3-203ENST00000528989 ANKRD26Q9UPS8 1709 aa33.41■■■□□ 2.94
LDLRAD3-203ENST00000528989 TNS3Q68CZ2 1445 aa33.4■■■□□ 2.94
LDLRAD3-203ENST00000528989 MRS2Q9HD23 443 aa33.39■■■□□ 2.94
LDLRAD3-203ENST00000528989 NHSL1Q5SYE7 1610 aa33.39■■■□□ 2.94
LDLRAD3-203ENST00000528989 MTHFSP49914 203 aa33.39■■■□□ 2.94
LDLRAD3-203ENST00000528989 RRS1Q15050 365 aaKnown RBP33.38■■■□□ 2.93
LDLRAD3-203ENST00000528989 POLKQ9UBT6 870 aa33.36■■■□□ 2.93
LDLRAD3-203ENST00000528989 ALS2Q96Q42 1657 aa33.35■■■□□ 2.93
LDLRAD3-203ENST00000528989 CABLES1Q8TDN4 633 aa33.35■■■□□ 2.93
LDLRAD3-203ENST00000528989 EMILIN1Q9Y6C2 1016 aa33.35■■■□□ 2.93
LDLRAD3-203ENST00000528989 MARF1Q9Y4F3 1742 aaKnown RBP33.34■■■□□ 2.93
LDLRAD3-203ENST00000528989 PPM1GO15355 546 aaPredicted RBP33.34■■■□□ 2.93
LDLRAD3-203ENST00000528989 AHDC1Q5TGY3 1603 aaPredicted RBP33.32■■■□□ 2.92
LDLRAD3-203ENST00000528989 AATKQ6ZMQ8 1374 aa33.31■■■□□ 2.92
LDLRAD3-203ENST00000528989 GCP02774 474 aa33.31■■■□□ 2.92
LDLRAD3-203ENST00000528989 LRRC59Q96AG4 307 aaKnown RBP33.3■■■□□ 2.92
LDLRAD3-203ENST00000528989 ARHGEF10O15013 1369 aa33.3■■■□□ 2.92
LDLRAD3-203ENST00000528989 USP19O94966 1318 aa33.29■■■□□ 2.92
LDLRAD3-203ENST00000528989 MED1Q15648 1581 aaPredicted RBP33.27■■■□□ 2.92
LDLRAD3-203ENST00000528989 USP54Q70EL1 1684 aa33.26■■■□□ 2.92
LDLRAD3-203ENST00000528989 MAP3K19Q56UN5 1328 aa33.26■■■□□ 2.91
LDLRAD3-203ENST00000528989 KCNH5Q8NCM2 988 aa33.25■■■□□ 2.91
LDLRAD3-203ENST00000528989 MAP2P11137 1827 aaKnown RBP33.24■■■□□ 2.91
LDLRAD3-203ENST00000528989 PHLPP1O60346 1717 aa33.23■■■□□ 2.91
LDLRAD3-203ENST00000528989 PNISRQ8TF01 805 aaKnown RBP33.22■■■□□ 2.91
LDLRAD3-203ENST00000528989 ZC3H6P61129 1189 aaKnown RBP33.22■■■□□ 2.91
LDLRAD3-203ENST00000528989 SLIT3O75094 1523 aa33.21■■■□□ 2.91
LDLRAD3-203ENST00000528989 FAM9BQ8IZU0 186 aa33.21■■■□□ 2.91
LDLRAD3-203ENST00000528989 ZBTB7CA1YPR0 619 aa33.2■■■□□ 2.91
LDLRAD3-203ENST00000528989 COL16A1Q07092 1604 aaPredicted RBP33.2■■■□□ 2.91
LDLRAD3-203ENST00000528989 NFAT5O94916 1531 aa33.2■■■□□ 2.91
LDLRAD3-203ENST00000528989 HSP90AB2PQ58FF8 381 aa33.18■■■□□ 2.9
LDLRAD3-203ENST00000528989 AMPHP49418 695 aa33.18■■■□□ 2.9
LDLRAD3-203ENST00000528989 PNPLA6Q8IY17 1366 aa33.17■■■□□ 2.9
LDLRAD3-203ENST00000528989 SMG6Q86US8 1419 aaKnown RBP33.17■■■□□ 2.9
LDLRAD3-203ENST00000528989 ARHGEF25Q86VW2 580 aa33.17■■■□□ 2.9
LDLRAD3-203ENST00000528989 CFAP53Q96M91 514 aa33.17■■■□□ 2.9
LDLRAD3-203ENST00000528989 HSPA1LP34931 641 aa33.14■■■□□ 2.9
LDLRAD3-203ENST00000528989 PEAK1Q9H792 1746 aa33.14■■■□□ 2.9
LDLRAD3-203ENST00000528989 HAP1P54257 671 aaPredicted RBP33.13■■■□□ 2.89
LDLRAD3-203ENST00000528989 HOXC9P31274 260 aa33.12■■■□□ 2.89
LDLRAD3-203ENST00000528989 COL3A1P02461 1466 aaPredicted RBP33.11■■■□□ 2.89
LDLRAD3-203ENST00000528989 CRYBG1Q9Y4K1 1723 aa33.11■■■□□ 2.89
LDLRAD3-203ENST00000528989 PHRF1Q9P1Y6 1649 aaKnown RBP33.11■■■□□ 2.89
LDLRAD3-203ENST00000528989 CDK12Q9NYV4 1490 aaPredicted RBP33.1■■■□□ 2.89
LDLRAD3-203ENST00000528989 INSRP06213 1382 aa33.1■■■□□ 2.89
LDLRAD3-203ENST00000528989 FLT4P35916 1363 aa33.1■■■□□ 2.89
LDLRAD3-203ENST00000528989 DIAPH1O60610 1272 aaKnown RBP33.1■■■□□ 2.89
LDLRAD3-203ENST00000528989 CHRNA2Q15822 529 aa33.1■■■□□ 2.89
LDLRAD3-203ENST00000528989 ADAMTS8Q9UP79 889 aa33.1■■■□□ 2.89
LDLRAD3-203ENST00000528989 KIAA0232Q92628 1395 aa33.09■■■□□ 2.89
LDLRAD3-203ENST00000528989 AXIN2Q9Y2T1 843 aa33.09■■■□□ 2.89
LDLRAD3-203ENST00000528989 IP6K1Q92551 441 aa33.08■■■□□ 2.89
LDLRAD3-203ENST00000528989 IL13P35225 146 aa33.06■■■□□ 2.88
LDLRAD3-203ENST00000528989 EIF4A2Q14240 407 aaKnown RBP33.06■■■□□ 2.88
LDLRAD3-203ENST00000528989 WDR43Q15061 677 aaKnown RBP eCLIP33.06■■■□□ 2.88
LDLRAD3-203ENST00000528989 LTN1O94822 1766 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms