RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 ARHGEF10O15013 1369 aa26.64■■□□□ 1.86
YIF1A-212ENST00000528575 FAM83GA6ND36 823 aa26.63■■□□□ 1.85
YIF1A-212ENST00000528575 CENPJQ9HC77 1338 aaPredicted RBP26.63■■□□□ 1.85
YIF1A-212ENST00000528575 NBPF8Q3BBV2 869 aa26.62■■□□□ 1.85
YIF1A-212ENST00000528575 TOPAZ1Q8N9V7 1692 aa26.61■■□□□ 1.85
YIF1A-212ENST00000528575 VPS72Q15906 364 aa26.58■■□□□ 1.85
YIF1A-212ENST00000528575 LMOD2Q6P5Q4 547 aa26.58■■□□□ 1.85
YIF1A-212ENST00000528575 CCER1Q8TC90 406 aaPredicted RBP26.56■■□□□ 1.84
YIF1A-212ENST00000528575 NUDT16Q96DE0 195 aaKnown RBP26.56■■□□□ 1.84
YIF1A-212ENST00000528575 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
YIF1A-212ENST00000528575 ONECUT3O60422 494 aaPredicted RBP26.55■■□□□ 1.84
YIF1A-212ENST00000528575 CARD11Q9BXL7 1154 aa26.55■■□□□ 1.84
YIF1A-212ENST00000528575 CDK19Q9BWU1 502 aa26.53■■□□□ 1.84
YIF1A-212ENST00000528575 SBNO2Q9Y2G9 1366 aa26.53■■□□□ 1.84
YIF1A-212ENST00000528575 COL14A1Q05707 1796 aaKnown RBP26.52■■□□□ 1.84
YIF1A-212ENST00000528575 QRICH2Q9H0J4 1663 aa26.52■■□□□ 1.84
YIF1A-212ENST00000528575 POLR3AO14802 1390 aaPredicted RBP26.51■■□□□ 1.83
YIF1A-212ENST00000528575 SEPT12Q8IYM1 358 aa26.51■■□□□ 1.83
YIF1A-212ENST00000528575 PHRF1Q9P1Y6 1649 aaKnown RBP26.5■■□□□ 1.83
YIF1A-212ENST00000528575 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
YIF1A-212ENST00000528575 HAP1P54257 671 aaPredicted RBP26.5■■□□□ 1.83
YIF1A-212ENST00000528575 NGDNQ8NEJ9 315 aaKnown RBP26.49■■□□□ 1.83
YIF1A-212ENST00000528575 EVC2Q86UK5 1308 aa26.48■■□□□ 1.83
YIF1A-212ENST00000528575 CCDC61Q9Y6R9 512 aa26.48■■□□□ 1.83
YIF1A-212ENST00000528575 BTG4Q9NY30 223 aa26.47■■□□□ 1.83
YIF1A-212ENST00000528575 PLEKHG3A1L390 1219 aa26.45■■□□□ 1.82
YIF1A-212ENST00000528575 ACEP12821 1306 aa26.44■■□□□ 1.82
YIF1A-212ENST00000528575 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
YIF1A-212ENST00000528575 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
YIF1A-212ENST00000528575 SRPK2P78362 688 aaKnown RBP26.43■■□□□ 1.82
YIF1A-212ENST00000528575 THSD7AQ9UPZ6 1657 aa26.43■■□□□ 1.82
YIF1A-212ENST00000528575 KIAA0232Q92628 1395 aa26.42■■□□□ 1.82
YIF1A-212ENST00000528575 NRKQ7Z2Y5 1582 aa26.41■■□□□ 1.82
YIF1A-212ENST00000528575 NUTM2GQ5VZR2 741 aa26.41■■□□□ 1.82
YIF1A-212ENST00000528575 DEFB132Q7Z7B7 95 aa26.41■■□□□ 1.82
YIF1A-212ENST00000528575 FAM98CQ17RN3 349 aaKnown RBP26.4■■□□□ 1.82
YIF1A-212ENST00000528575 CCDC125Q86Z20 511 aa26.4■■□□□ 1.82
YIF1A-212ENST00000528575 SPATA31A5Q5VU36 1347 aa26.39■■□□□ 1.82
YIF1A-212ENST00000528575 SPATA31A7Q8IWB4 1347 aa26.39■■□□□ 1.82
YIF1A-212ENST00000528575 BRD4O60885 1362 aaPredicted RBP26.39■■□□□ 1.82
YIF1A-212ENST00000528575 CCDC9Q9Y3X0 531 aaKnown RBP26.39■■□□□ 1.82
YIF1A-212ENST00000528575 CHRNA2Q15822 529 aa26.38■■□□□ 1.81
YIF1A-212ENST00000528575 PUS7Q96PZ0 661 aaKnown RBP26.38■■□□□ 1.81
YIF1A-212ENST00000528575 KRT27Q7Z3Y8 459 aa26.37■■□□□ 1.81
YIF1A-212ENST00000528575 CABP2Q9NPB3 220 aa26.37■■□□□ 1.81
YIF1A-212ENST00000528575 LMO7Q8WWI1 1683 aa26.36■■□□□ 1.81
YIF1A-212ENST00000528575 PPIP5K1Q6PFW1 1433 aa26.36■■□□□ 1.81
YIF1A-212ENST00000528575 PRDM11Q9NQV5 511 aa26.35■■□□□ 1.81
YIF1A-212ENST00000528575 USP19O94966 1318 aa26.35■■□□□ 1.81
YIF1A-212ENST00000528575 CAMTA1Q9Y6Y1 1673 aa26.34■■□□□ 1.81
YIF1A-212ENST00000528575 ZC3H6P61129 1189 aaKnown RBP26.33■■□□□ 1.81
YIF1A-212ENST00000528575 FAM182BQ5T319 152 aa26.33■■□□□ 1.81
YIF1A-212ENST00000528575 SSH2Q76I76 1423 aa26.32■■□□□ 1.8
YIF1A-212ENST00000528575 SPATA31A1Q5TZJ5 1347 aa26.32■■□□□ 1.8
YIF1A-212ENST00000528575 USP47Q96K76 1375 aa26.31■■□□□ 1.8
YIF1A-212ENST00000528575 ST20-MTHFSA0A0A6YYL1 179 aa26.28■■□□□ 1.8
YIF1A-212ENST00000528575 ZNF692Q9BU19 519 aaPredicted RBP26.28■■□□□ 1.8
YIF1A-212ENST00000528575 CPDO75976 1380 aa26.28■■□□□ 1.8
YIF1A-212ENST00000528575 TNS1Q9HBL0 1735 aaKnown RBP26.28■■□□□ 1.8
YIF1A-212ENST00000528575 TESK2Q96S53 571 aa26.27■■□□□ 1.8
YIF1A-212ENST00000528575 CABP1Q9NZU7 370 aa26.27■■□□□ 1.8
YIF1A-212ENST00000528575 ZRANB1Q9UGI0 708 aa26.27■■□□□ 1.8
YIF1A-212ENST00000528575 USP6P35125 1406 aa26.27■■□□□ 1.8
YIF1A-212ENST00000528575 PIK3C2AO00443 1686 aa26.27■■□□□ 1.8
YIF1A-212ENST00000528575 ABTB2Q8N961 1025 aa26.26■■□□□ 1.79
YIF1A-212ENST00000528575 NINLQ9Y2I6 1382 aa26.25■■□□□ 1.79
YIF1A-212ENST00000528575 SLIT3O75094 1523 aa26.24■■□□□ 1.79
YIF1A-212ENST00000528575 STRN4Q9NRL3 753 aa26.24■■□□□ 1.79
YIF1A-212ENST00000528575 A0A0G2JS52 829 aa26.22■■□□□ 1.79
YIF1A-212ENST00000528575 MYT1Q01538 1121 aa26.22■■□□□ 1.79
YIF1A-212ENST00000528575 CDCA8Q53HL2 280 aa26.22■■□□□ 1.79
YIF1A-212ENST00000528575 LARP1Q6PKG0 1096 aaKnown RBP26.22■■□□□ 1.79
YIF1A-212ENST00000528575 COL18A1P39060 1754 aa26.22■■□□□ 1.79
YIF1A-212ENST00000528575 GCP02774 474 aa26.21■■□□□ 1.79
YIF1A-212ENST00000528575 TMF1P82094 1093 aa26.21■■□□□ 1.79
YIF1A-212ENST00000528575 RGPD1P0DJD0 1748 aa26.21■■□□□ 1.79
YIF1A-212ENST00000528575 COL5A2P05997 1499 aaPredicted RBP26.2■■□□□ 1.78
YIF1A-212ENST00000528575 CPSF1Q10570 1443 aaKnown RBP26.2■■□□□ 1.78
YIF1A-212ENST00000528575 AKAP12Q02952 1782 aa26.2■■□□□ 1.78
YIF1A-212ENST00000528575 DISP2A7MBM2 1401 aa26.17■■□□□ 1.78
YIF1A-212ENST00000528575 EN1Q05925 392 aaPredicted RBP26.16■■□□□ 1.78
YIF1A-212ENST00000528575 BARGINQ6ZT62 677 aa26.16■■□□□ 1.78
YIF1A-212ENST00000528575 NLRP13Q86W25 1043 aa26.16■■□□□ 1.78
YIF1A-212ENST00000528575 USP35Q9P2H5 1018 aa26.16■■□□□ 1.78
YIF1A-212ENST00000528575 TTC21AQ8NDW8 1320 aa26.14■■□□□ 1.78
YIF1A-212ENST00000528575 TERF2IPQ9NYB0 399 aa26.14■■□□□ 1.78
YIF1A-212ENST00000528575 CD163L1Q9NR16 1453 aa26.13■■□□□ 1.77
YIF1A-212ENST00000528575 EIF4G2P78344 907 aaKnown RBP eCLIP26.13■■□□□ 1.77
YIF1A-212ENST00000528575 SF3B2Q13435 895 aaKnown RBP26.13■■□□□ 1.77
YIF1A-212ENST00000528575 HDGFL2Q7Z4V5 671 aaPredicted RBP26.13■■□□□ 1.77
YIF1A-212ENST00000528575 KTN1Q86UP2 1357 aaKnown RBP26.12■■□□□ 1.77
YIF1A-212ENST00000528575 PARP4Q9UKK3 1724 aaKnown RBP26.12■■□□□ 1.77
YIF1A-212ENST00000528575 NLRP6P59044 892 aa26.11■■□□□ 1.77
YIF1A-212ENST00000528575 AXIN2Q9Y2T1 843 aa26.11■■□□□ 1.77
YIF1A-212ENST00000528575 TTC21BQ7Z4L5 1316 aa26.11■■□□□ 1.77
YIF1A-212ENST00000528575 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
YIF1A-212ENST00000528575 BAG6P46379 1132 aa26.1■■□□□ 1.77
YIF1A-212ENST00000528575 TMC1Q8TDI8 760 aa26.1■■□□□ 1.77
YIF1A-212ENST00000528575 MON2Q7Z3U7 1717 aa26.1■■□□□ 1.77
YIF1A-212ENST00000528575 PEAK1Q9H792 1746 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms