RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 SLC24A1O60721 1099 aa23.74■■□□□ 1.39
HIF3A-211ENST00000528563 PLEKHG5O94827 1062 aa23.74■■□□□ 1.39
HIF3A-211ENST00000528563 SOCS7O14512 581 aa23.73■■□□□ 1.39
HIF3A-211ENST00000528563 USP47Q96K76 1375 aa23.73■■□□□ 1.39
HIF3A-211ENST00000528563 HAP1P54257 671 aaPredicted RBP23.72■■□□□ 1.39
HIF3A-211ENST00000528563 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
HIF3A-211ENST00000528563 ZNF692Q9BU19 519 aaPredicted RBP23.71■■□□□ 1.39
HIF3A-211ENST00000528563 USP21Q9UK80 565 aa23.71■■□□□ 1.39
HIF3A-211ENST00000528563 BRD4O60885 1362 aaPredicted RBP23.71■■□□□ 1.39
HIF3A-211ENST00000528563 MARF1Q9Y4F3 1742 aaKnown RBP23.7■■□□□ 1.39
HIF3A-211ENST00000528563 ABTB2Q8N961 1025 aa23.69■■□□□ 1.38
HIF3A-211ENST00000528563 USP6P35125 1406 aa23.69■■□□□ 1.38
HIF3A-211ENST00000528563 SSH2Q76I76 1423 aa23.68■■□□□ 1.38
HIF3A-211ENST00000528563 BCL9LQ86UU0 1499 aa23.68■■□□□ 1.38
HIF3A-211ENST00000528563 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
HIF3A-211ENST00000528563 RXRBP28702 533 aa23.68■■□□□ 1.38
HIF3A-211ENST00000528563 NUTM2GQ5VZR2 741 aa23.68■■□□□ 1.38
HIF3A-211ENST00000528563 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
HIF3A-211ENST00000528563 ABCA3Q99758 1704 aa23.66■■□□□ 1.38
HIF3A-211ENST00000528563 SLC12A5Q9H2X9 1139 aa23.66■■□□□ 1.38
HIF3A-211ENST00000528563 SLIT2O94813 1529 aa23.65■■□□□ 1.38
HIF3A-211ENST00000528563 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.38
HIF3A-211ENST00000528563 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.38
HIF3A-211ENST00000528563 NLRP13Q86W25 1043 aa23.63■■□□□ 1.37
HIF3A-211ENST00000528563 UNC5CLQ8IV45 518 aa23.63■■□□□ 1.37
HIF3A-211ENST00000528563 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
HIF3A-211ENST00000528563 CRYBG1Q9Y4K1 1723 aa23.63■■□□□ 1.37
HIF3A-211ENST00000528563 TMF1P82094 1093 aa23.62■■□□□ 1.37
HIF3A-211ENST00000528563 TTC21BQ7Z4L5 1316 aa23.61■■□□□ 1.37
HIF3A-211ENST00000528563 KTN1Q86UP2 1357 aaKnown RBP23.61■■□□□ 1.37
HIF3A-211ENST00000528563 ATRNO75882 1429 aa23.61■■□□□ 1.37
HIF3A-211ENST00000528563 USP19O94966 1318 aa23.61■■□□□ 1.37
HIF3A-211ENST00000528563 CD163L1Q9NR16 1453 aa23.6■■□□□ 1.37
HIF3A-211ENST00000528563 NLRP6P59044 892 aa23.6■■□□□ 1.37
HIF3A-211ENST00000528563 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
HIF3A-211ENST00000528563 TTC21AQ8NDW8 1320 aa23.58■■□□□ 1.37
HIF3A-211ENST00000528563 TERF2IPQ9NYB0 399 aa23.58■■□□□ 1.37
HIF3A-211ENST00000528563 CDK12Q9NYV4 1490 aaPredicted RBP23.57■■□□□ 1.36
HIF3A-211ENST00000528563 GCP02774 474 aa23.57■■□□□ 1.36
HIF3A-211ENST00000528563 ZC3H6P61129 1189 aaKnown RBP23.57■■□□□ 1.36
HIF3A-211ENST00000528563 HDGFL2Q7Z4V5 671 aaPredicted RBP23.57■■□□□ 1.36
HIF3A-211ENST00000528563 PRDM11Q9NQV5 511 aa23.57■■□□□ 1.36
HIF3A-211ENST00000528563 NINLQ9Y2I6 1382 aa23.57■■□□□ 1.36
HIF3A-211ENST00000528563 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
HIF3A-211ENST00000528563 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
HIF3A-211ENST00000528563 EIF4G2P78344 907 aaKnown RBP eCLIP23.56■■□□□ 1.36
HIF3A-211ENST00000528563 CDCA8Q53HL2 280 aa23.56■■□□□ 1.36
HIF3A-211ENST00000528563 BTG4Q9NY30 223 aa23.55■■□□□ 1.36
HIF3A-211ENST00000528563 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.54■■□□□ 1.36
HIF3A-211ENST00000528563 PHRF1Q9P1Y6 1649 aaKnown RBP23.54■■□□□ 1.36
HIF3A-211ENST00000528563 VPS72Q15906 364 aa23.54■■□□□ 1.36
HIF3A-211ENST00000528563 NWD2Q9ULI1 1742 aa23.53■■□□□ 1.36
HIF3A-211ENST00000528563 PLCH1Q4KWH8 1693 aa23.53■■□□□ 1.36
HIF3A-211ENST00000528563 HSPA5P11021 654 aaKnown RBP23.53■■□□□ 1.36
HIF3A-211ENST00000528563 CHRNA2Q15822 529 aa23.53■■□□□ 1.36
HIF3A-211ENST00000528563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.53■■□□□ 1.36
HIF3A-211ENST00000528563 COL14A1Q05707 1796 aaKnown RBP23.53■■□□□ 1.36
HIF3A-211ENST00000528563 A0A1W2PP64 1363 aa23.53■■□□□ 1.36
HIF3A-211ENST00000528563 CPDO75976 1380 aa23.53■■□□□ 1.36
HIF3A-211ENST00000528563 MON2Q7Z3U7 1717 aa23.52■■□□□ 1.36
HIF3A-211ENST00000528563 PIK3C2AO00443 1686 aa23.52■■□□□ 1.36
HIF3A-211ENST00000528563 NRKQ7Z2Y5 1582 aa23.51■■□□□ 1.35
HIF3A-211ENST00000528563 EDC4Q6P2E9 1401 aaKnown RBP23.5■■□□□ 1.35
HIF3A-211ENST00000528563 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
HIF3A-211ENST00000528563 RGS12O14924 1447 aa23.49■■□□□ 1.35
HIF3A-211ENST00000528563 SLIT3O75094 1523 aa23.49■■□□□ 1.35
HIF3A-211ENST00000528563 NME9Q86XW9 330 aa23.49■■□□□ 1.35
HIF3A-211ENST00000528563 USP31Q70CQ4 1352 aa23.49■■□□□ 1.35
HIF3A-211ENST00000528563 KCNH5Q8NCM2 988 aa23.47■■□□□ 1.35
HIF3A-211ENST00000528563 ANKRD36BQ8N2N9 1353 aa23.46■■□□□ 1.35
HIF3A-211ENST00000528563 ONECUT3O60422 494 aaPredicted RBP23.46■■□□□ 1.35
HIF3A-211ENST00000528563 GLI3P10071 1580 aa23.46■■□□□ 1.35
HIF3A-211ENST00000528563 CCDC9Q9Y3X0 531 aaKnown RBP23.45■■□□□ 1.34
HIF3A-211ENST00000528563 NRAPQ86VF7 1730 aa23.45■■□□□ 1.34
HIF3A-211ENST00000528563 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
HIF3A-211ENST00000528563 CAMTA1Q9Y6Y1 1673 aa23.43■■□□□ 1.34
HIF3A-211ENST00000528563 SPATA31A5Q5VU36 1347 aa23.42■■□□□ 1.34
HIF3A-211ENST00000528563 SPATA31A7Q8IWB4 1347 aa23.42■■□□□ 1.34
HIF3A-211ENST00000528563 AATKQ6ZMQ8 1374 aa23.42■■□□□ 1.34
HIF3A-211ENST00000528563 EVA1CP58658 441 aa23.41■■□□□ 1.34
HIF3A-211ENST00000528563 STRN4Q9NRL3 753 aa23.41■■□□□ 1.34
HIF3A-211ENST00000528563 LMO7Q8WWI1 1683 aa23.4■■□□□ 1.34
HIF3A-211ENST00000528563 CARD14Q9BXL6 1004 aa23.4■■□□□ 1.34
HIF3A-211ENST00000528563 USP54Q70EL1 1684 aa23.39■■□□□ 1.34
HIF3A-211ENST00000528563 SOX12O15370 315 aa23.39■■□□□ 1.34
HIF3A-211ENST00000528563 AXIN2Q9Y2T1 843 aa23.39■■□□□ 1.34
HIF3A-211ENST00000528563 ZBTB7CA1YPR0 619 aa23.38■■□□□ 1.33
HIF3A-211ENST00000528563 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
HIF3A-211ENST00000528563 SEPT12Q8IYM1 358 aa23.38■■□□□ 1.33
HIF3A-211ENST00000528563 NFAT5O94916 1531 aa23.38■■□□□ 1.33
HIF3A-211ENST00000528563 FYB1O15117 783 aa23.37■■□□□ 1.33
HIF3A-211ENST00000528563 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
HIF3A-211ENST00000528563 OVOS2A0A0J9YW53 1432 aa23.36■■□□□ 1.33
HIF3A-211ENST00000528563 FAM98CQ17RN3 349 aaKnown RBP23.36■■□□□ 1.33
HIF3A-211ENST00000528563 OVOS2Q6IE36 1432 aa23.36■■□□□ 1.33
HIF3A-211ENST00000528563 LARP1Q6PKG0 1096 aaKnown RBP23.36■■□□□ 1.33
HIF3A-211ENST00000528563 COL18A1P39060 1754 aa23.36■■□□□ 1.33
HIF3A-211ENST00000528563 UPF1Q92900 1129 aaKnown RBP eCLIP23.36■■□□□ 1.33
HIF3A-211ENST00000528563 MYOM1P52179 1685 aa23.35■■□□□ 1.33
HIF3A-211ENST00000528563 POLR3GLQ9BT43 218 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms