RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 KRT28Q7Z3Y7 464 aa27.76■■■□□ 2.03
C11orf49-215ENST00000528488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.75■■■□□ 2.03
C11orf49-215ENST00000528488 TTC21BQ7Z4L5 1316 aa27.75■■■□□ 2.03
C11orf49-215ENST00000528488 DIEXFQ68CQ4 756 aaKnown RBP27.74■■■□□ 2.03
C11orf49-215ENST00000528488 AHDC1Q5TGY3 1603 aaPredicted RBP27.74■■■□□ 2.03
C11orf49-215ENST00000528488 BRD4O60885 1362 aaPredicted RBP27.73■■■□□ 2.03
C11orf49-215ENST00000528488 ANKRD26Q9UPS8 1709 aa27.73■■■□□ 2.03
C11orf49-215ENST00000528488 PIK3C2AO00443 1686 aa27.72■■■□□ 2.03
C11orf49-215ENST00000528488 CGNL1Q0VF96 1302 aa27.72■■■□□ 2.03
C11orf49-215ENST00000528488 PHLPP1O60346 1717 aa27.72■■■□□ 2.03
C11orf49-215ENST00000528488 AMER1Q5JTC6 1135 aaPredicted RBP27.72■■■□□ 2.03
C11orf49-215ENST00000528488 PAK3O75914 559 aaPredicted RBP27.71■■■□□ 2.03
C11orf49-215ENST00000528488 ALS2Q96Q42 1657 aa27.71■■■□□ 2.03
C11orf49-215ENST00000528488 CNGB1Q14028 1251 aaPredicted RBP27.7■■■□□ 2.03
C11orf49-215ENST00000528488 TTC21AQ8NDW8 1320 aa27.7■■■□□ 2.03
C11orf49-215ENST00000528488 NME9Q86XW9 330 aa27.69■■■□□ 2.02
C11orf49-215ENST00000528488 SOS2Q07890 1332 aaPredicted RBP27.69■■■□□ 2.02
C11orf49-215ENST00000528488 SBNO1A3KN83 1393 aa27.68■■■□□ 2.02
C11orf49-215ENST00000528488 NPC1L1Q9UHC9 1359 aa27.68■■■□□ 2.02
C11orf49-215ENST00000528488 FYB1O15117 783 aa27.67■■■□□ 2.02
C11orf49-215ENST00000528488 CC2D1BQ5T0F9 858 aaKnown RBP27.67■■■□□ 2.02
C11orf49-215ENST00000528488 MARF1Q9Y4F3 1742 aaKnown RBP27.67■■■□□ 2.02
C11orf49-215ENST00000528488 GGNBP2Q9H3C7 697 aa27.66■■■□□ 2.02
C11orf49-215ENST00000528488 NSD2O96028 1365 aa27.65■■■□□ 2.02
C11orf49-215ENST00000528488 USP54Q70EL1 1684 aa27.65■■■□□ 2.02
C11orf49-215ENST00000528488 ZRANB1Q9UGI0 708 aa27.65■■■□□ 2.02
C11orf49-215ENST00000528488 TNS3Q68CZ2 1445 aa27.65■■■□□ 2.02
C11orf49-215ENST00000528488 COL16A1Q07092 1604 aaPredicted RBP27.64■■■□□ 2.02
C11orf49-215ENST00000528488 ABTB2Q8N961 1025 aa27.63■■■□□ 2.01
C11orf49-215ENST00000528488 SPATA31A3Q5VYP0 1347 aa27.62■■■□□ 2.01
C11orf49-215ENST00000528488 NUTM2GQ5VZR2 741 aa27.61■■■□□ 2.01
C11orf49-215ENST00000528488 LMOD2Q6P5Q4 547 aa27.61■■■□□ 2.01
C11orf49-215ENST00000528488 OVOS2A0A0J9YW53 1432 aa27.6■■■□□ 2.01
C11orf49-215ENST00000528488 OVOS2Q6IE36 1432 aa27.6■■■□□ 2.01
C11orf49-215ENST00000528488 USP31Q70CQ4 1352 aa27.6■■■□□ 2.01
C11orf49-215ENST00000528488 ANP32CO43423 234 aa27.59■■■□□ 2.01
C11orf49-215ENST00000528488 NLRP6P59044 892 aa27.59■■■□□ 2.01
C11orf49-215ENST00000528488 COG3Q96JB2 828 aa27.58■■■□□ 2.01
C11orf49-215ENST00000528488 MORC1Q86VD1 984 aa27.57■■■□□ 2
C11orf49-215ENST00000528488 ARHGEF10O15013 1369 aa27.57■■■□□ 2
C11orf49-215ENST00000528488 PARD3Q8TEW0 1356 aa27.57■■■□□ 2
C11orf49-215ENST00000528488 PRKRIP1Q9H875 184 aaPredicted RBP27.56■■■□□ 2
C11orf49-215ENST00000528488 CRYBG1Q9Y4K1 1723 aa27.55■■■□□ 2
C11orf49-215ENST00000528488 NLRP13Q86W25 1043 aa27.54■■■□□ 2
C11orf49-215ENST00000528488 LRRC59Q96AG4 307 aaKnown RBP27.54■■■□□ 2
C11orf49-215ENST00000528488 MED1Q15648 1581 aaPredicted RBP27.53■■■□□ 2
C11orf49-215ENST00000528488 PHRF1Q9P1Y6 1649 aaKnown RBP27.53■■■□□ 2
C11orf49-215ENST00000528488 MAP2P11137 1827 aaKnown RBP27.53■■■□□ 2
C11orf49-215ENST00000528488 RALBP1Q15311 655 aa27.52■■■□□ 2
C11orf49-215ENST00000528488 ABCA3Q99758 1704 aa27.52■■■□□ 2
C11orf49-215ENST00000528488 PLEKHG5O94827 1062 aa27.52■■■□□ 2
C11orf49-215ENST00000528488 TNNT2P45379 298 aaPredicted RBP27.52■■■□□ 2
C11orf49-215ENST00000528488 SLIT3O75094 1523 aa27.51■■□□□ 1.99
C11orf49-215ENST00000528488 USP19O94966 1318 aa27.5■■□□□ 1.99
C11orf49-215ENST00000528488 COL22A1Q8NFW1 1626 aaPredicted RBP27.5■■□□□ 1.99
C11orf49-215ENST00000528488 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
C11orf49-215ENST00000528488 SHPRHQ149N8 1683 aa27.48■■□□□ 1.99
C11orf49-215ENST00000528488 SOX12O15370 315 aa27.47■■□□□ 1.99
C11orf49-215ENST00000528488 HSPA1LP34931 641 aa27.47■■□□□ 1.99
C11orf49-215ENST00000528488 NFAT5O94916 1531 aa27.46■■□□□ 1.99
C11orf49-215ENST00000528488 FBLN1P23142 703 aa27.45■■□□□ 1.99
C11orf49-215ENST00000528488 MIER1Q8N108 512 aa27.45■■□□□ 1.99
C11orf49-215ENST00000528488 CABLES1Q8TDN4 633 aa27.45■■□□□ 1.99
C11orf49-215ENST00000528488 LTN1O94822 1766 aa27.45■■□□□ 1.99
C11orf49-215ENST00000528488 MYBBP1AQ9BQG0 1328 aaKnown RBP27.44■■□□□ 1.98
C11orf49-215ENST00000528488 PPP2R1AP30153 589 aa27.44■■□□□ 1.98
C11orf49-215ENST00000528488 GCP02774 474 aa27.42■■□□□ 1.98
C11orf49-215ENST00000528488 KCNH5Q8NCM2 988 aa27.42■■□□□ 1.98
C11orf49-215ENST00000528488 AATKQ6ZMQ8 1374 aa27.42■■□□□ 1.98
C11orf49-215ENST00000528488 FBXO41Q8TF61 875 aa27.41■■□□□ 1.98
C11orf49-215ENST00000528488 JCADQ9P266 1359 aa27.4■■□□□ 1.98
C11orf49-215ENST00000528488 RRS1Q15050 365 aaKnown RBP27.39■■□□□ 1.98
C11orf49-215ENST00000528488 PEAK1Q9H792 1746 aa27.38■■□□□ 1.97
C11orf49-215ENST00000528488 HAP1P54257 671 aaPredicted RBP27.37■■□□□ 1.97
C11orf49-215ENST00000528488 POLKQ9UBT6 870 aa27.37■■□□□ 1.97
C11orf49-215ENST00000528488 EMILIN1Q9Y6C2 1016 aa27.37■■□□□ 1.97
C11orf49-215ENST00000528488 SMG6Q86US8 1419 aaKnown RBP27.36■■□□□ 1.97
C11orf49-215ENST00000528488 MAP3K19Q56UN5 1328 aa27.35■■□□□ 1.97
C11orf49-215ENST00000528488 MTHFSP49914 203 aa27.35■■□□□ 1.97
C11orf49-215ENST00000528488 ZC3H6P61129 1189 aaKnown RBP27.34■■□□□ 1.97
C11orf49-215ENST00000528488 ZBTB7CA1YPR0 619 aa27.33■■□□□ 1.97
C11orf49-215ENST00000528488 PPM1GO15355 546 aaPredicted RBP27.32■■□□□ 1.96
C11orf49-215ENST00000528488 RGPD5Q99666 1765 aa27.32■■□□□ 1.96
C11orf49-215ENST00000528488 ARHGEF25Q86VW2 580 aa27.31■■□□□ 1.96
C11orf49-215ENST00000528488 COL18A1P39060 1754 aa27.31■■□□□ 1.96
C11orf49-215ENST00000528488 CDK12Q9NYV4 1490 aaPredicted RBP27.31■■□□□ 1.96
C11orf49-215ENST00000528488 KIAA0232Q92628 1395 aa27.31■■□□□ 1.96
C11orf49-215ENST00000528488 CPDO75976 1380 aa27.3■■□□□ 1.96
C11orf49-215ENST00000528488 CCDC184Q52MB2 194 aa27.3■■□□□ 1.96
C11orf49-215ENST00000528488 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
C11orf49-215ENST00000528488 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
C11orf49-215ENST00000528488 AMPHP49418 695 aa27.29■■□□□ 1.96
C11orf49-215ENST00000528488 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
C11orf49-215ENST00000528488 CCER2I3L3R5 266 aa27.27■■□□□ 1.96
C11orf49-215ENST00000528488 RTL1A6NKG5 1358 aa27.27■■□□□ 1.96
C11orf49-215ENST00000528488 FLT4P35916 1363 aa27.27■■□□□ 1.96
C11orf49-215ENST00000528488 SPATA31A6Q5VVP1 1343 aa27.26■■□□□ 1.95
C11orf49-215ENST00000528488 KIF24Q5T7B8 1368 aa27.26■■□□□ 1.95
C11orf49-215ENST00000528488 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
C11orf49-215ENST00000528488 HOXC9P31274 260 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms