RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
CMTM1-210ENST00000528441 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
CMTM1-210ENST00000528441 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
CMTM1-210ENST00000528441 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
CMTM1-210ENST00000528441 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
CMTM1-210ENST00000528441 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
CMTM1-210ENST00000528441 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
CMTM1-210ENST00000528441 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
CMTM1-210ENST00000528441 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
CMTM1-210ENST00000528441 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
CMTM1-210ENST00000528441 A0A0G2JS52 829 aa12.89□□□□□ -0.35
CMTM1-210ENST00000528441 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
CMTM1-210ENST00000528441 MYT1Q01538 1121 aa12.89□□□□□ -0.35
CMTM1-210ENST00000528441 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
CMTM1-210ENST00000528441 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
CMTM1-210ENST00000528441 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
CMTM1-210ENST00000528441 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
CMTM1-210ENST00000528441 ATP7BP35670 1465 aa12.87□□□□□ -0.35
CMTM1-210ENST00000528441 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
CMTM1-210ENST00000528441 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
CMTM1-210ENST00000528441 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
CMTM1-210ENST00000528441 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
CMTM1-210ENST00000528441 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
CMTM1-210ENST00000528441 ACEP12821 1306 aa12.85□□□□□ -0.35
CMTM1-210ENST00000528441 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
CMTM1-210ENST00000528441 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-210ENST00000528441 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-210ENST00000528441 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
CMTM1-210ENST00000528441 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
CMTM1-210ENST00000528441 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
CMTM1-210ENST00000528441 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
CMTM1-210ENST00000528441 RGS12O14924 1447 aa12.82□□□□□ -0.36
CMTM1-210ENST00000528441 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
CMTM1-210ENST00000528441 UNC5CLQ8IV45 518 aa12.82□□□□□ -0.36
CMTM1-210ENST00000528441 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
CMTM1-210ENST00000528441 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
CMTM1-210ENST00000528441 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
CMTM1-210ENST00000528441 ABCB7O75027 752 aa12.81□□□□□ -0.36
CMTM1-210ENST00000528441 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
CMTM1-210ENST00000528441 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
CMTM1-210ENST00000528441 ATRNO75882 1429 aa12.8□□□□□ -0.36
CMTM1-210ENST00000528441 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
CMTM1-210ENST00000528441 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
CMTM1-210ENST00000528441 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
CMTM1-210ENST00000528441 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
CMTM1-210ENST00000528441 ZC3H6P61129 1189 aaKnown RBP12.79□□□□□ -0.36
CMTM1-210ENST00000528441 STRN4Q9NRL3 753 aa12.79□□□□□ -0.36
CMTM1-210ENST00000528441 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
CMTM1-210ENST00000528441 SOX12O15370 315 aa12.78□□□□□ -0.36
CMTM1-210ENST00000528441 EVA1CP58658 441 aa12.78□□□□□ -0.36
CMTM1-210ENST00000528441 NLRP13Q86W25 1043 aa12.78□□□□□ -0.36
CMTM1-210ENST00000528441 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
CMTM1-210ENST00000528441 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-210ENST00000528441 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
CMTM1-210ENST00000528441 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
CMTM1-210ENST00000528441 NWD2Q9ULI1 1742 aa12.77□□□□□ -0.36
CMTM1-210ENST00000528441 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
CMTM1-210ENST00000528441 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
CMTM1-210ENST00000528441 SLIT2O94813 1529 aa12.77□□□□□ -0.37
CMTM1-210ENST00000528441 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
CMTM1-210ENST00000528441 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
CMTM1-210ENST00000528441 NLRP6P59044 892 aa12.76□□□□□ -0.37
CMTM1-210ENST00000528441 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
CMTM1-210ENST00000528441 VPS72Q15906 364 aa12.75□□□□□ -0.37
CMTM1-210ENST00000528441 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
CMTM1-210ENST00000528441 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
CMTM1-210ENST00000528441 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
CMTM1-210ENST00000528441 USP6P35125 1406 aa12.74□□□□□ -0.37
CMTM1-210ENST00000528441 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
CMTM1-210ENST00000528441 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
CMTM1-210ENST00000528441 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
CMTM1-210ENST00000528441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
CMTM1-210ENST00000528441 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
CMTM1-210ENST00000528441 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
CMTM1-210ENST00000528441 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-210ENST00000528441 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
CMTM1-210ENST00000528441 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
CMTM1-210ENST00000528441 GLI3P10071 1580 aa12.72□□□□□ -0.37
CMTM1-210ENST00000528441 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
CMTM1-210ENST00000528441 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
CMTM1-210ENST00000528441 POLA2Q14181 598 aa12.71□□□□□ -0.37
CMTM1-210ENST00000528441 NRKQ7Z2Y5 1582 aa12.71□□□□□ -0.37
CMTM1-210ENST00000528441 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
CMTM1-210ENST00000528441 NRAPQ86VF7 1730 aa12.71□□□□□ -0.38
CMTM1-210ENST00000528441 USP47Q96K76 1375 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 SBNO2Q9Y2G9 1366 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 TTC21BQ7Z4L5 1316 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 GCP02774 474 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 TMF1P82094 1093 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 TERF2IPQ9NYB0 399 aa12.7□□□□□ -0.38
CMTM1-210ENST00000528441 TTC21AQ8NDW8 1320 aa12.69□□□□□ -0.38
CMTM1-210ENST00000528441 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
CMTM1-210ENST00000528441 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
CMTM1-210ENST00000528441 SLC12A5Q9H2X9 1139 aa12.68□□□□□ -0.38
CMTM1-210ENST00000528441 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
CMTM1-210ENST00000528441 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
CMTM1-210ENST00000528441 USP19O94966 1318 aa12.67□□□□□ -0.38
CMTM1-210ENST00000528441 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms