RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CDK19Q9BWU1 502 aa37.52■■■■□ 3.6
TRIM3-206ENST00000528227 ONECUT3O60422 494 aaPredicted RBP37.51■■■■□ 3.6
TRIM3-206ENST00000528227 PAK3O75914 559 aaPredicted RBP37.51■■■■□ 3.6
TRIM3-206ENST00000528227 TOPAZ1Q8N9V7 1692 aa37.5■■■■□ 3.59
TRIM3-206ENST00000528227 NBPF1Q3BBV0 1214 aa37.5■■■■□ 3.59
TRIM3-206ENST00000528227 BTG4Q9NY30 223 aa37.48■■■■□ 3.59
TRIM3-206ENST00000528227 BLMP54132 1417 aaPredicted RBP37.45■■■■□ 3.59
TRIM3-206ENST00000528227 POLR3AO14802 1390 aaPredicted RBP37.44■■■■□ 3.58
TRIM3-206ENST00000528227 CCDC61Q9Y6R9 512 aa37.42■■■■□ 3.58
TRIM3-206ENST00000528227 ACEP12821 1306 aa37.4■■■■□ 3.58
TRIM3-206ENST00000528227 PHRF1Q9P1Y6 1649 aaKnown RBP37.4■■■■□ 3.58
TRIM3-206ENST00000528227 KRT27Q7Z3Y8 459 aa37.39■■■■□ 3.58
TRIM3-206ENST00000528227 PLEKHG3A1L390 1219 aa37.38■■■■□ 3.57
TRIM3-206ENST00000528227 ZRANB1Q9UGI0 708 aa37.38■■■■□ 3.57
TRIM3-206ENST00000528227 NBPF8Q3BBV2 869 aa37.37■■■■□ 3.57
TRIM3-206ENST00000528227 PRDM11Q9NQV5 511 aa37.37■■■■□ 3.57
TRIM3-206ENST00000528227 FAM98CQ17RN3 349 aaKnown RBP37.36■■■■□ 3.57
TRIM3-206ENST00000528227 CENPJQ9HC77 1338 aaPredicted RBP37.36■■■■□ 3.57
TRIM3-206ENST00000528227 KIAA0232Q92628 1395 aa37.33■■■■□ 3.57
TRIM3-206ENST00000528227 A0A0G2JS52 829 aa37.33■■■■□ 3.57
TRIM3-206ENST00000528227 MYT1Q01538 1121 aa37.33■■■■□ 3.57
TRIM3-206ENST00000528227 L3MBTL2Q969R5 705 aa37.33■■■■□ 3.57
TRIM3-206ENST00000528227 SPATA31A5Q5VU36 1347 aa37.33■■■■□ 3.57
TRIM3-206ENST00000528227 SPATA31A7Q8IWB4 1347 aa37.33■■■■□ 3.57
TRIM3-206ENST00000528227 QRICH2Q9H0J4 1663 aa37.32■■■■□ 3.57
TRIM3-206ENST00000528227 NUTM2GQ5VZR2 741 aa37.31■■■■□ 3.56
TRIM3-206ENST00000528227 SRPK2P78362 688 aaKnown RBP37.3■■■■□ 3.56
TRIM3-206ENST00000528227 SF3B2Q13435 895 aaKnown RBP37.29■■■■□ 3.56
TRIM3-206ENST00000528227 PPIP5K1Q6PFW1 1433 aa37.28■■■■□ 3.56
TRIM3-206ENST00000528227 DEFB132Q7Z7B7 95 aa37.28■■■■□ 3.56
TRIM3-206ENST00000528227 CHRNA2Q15822 529 aa37.27■■■■□ 3.56
TRIM3-206ENST00000528227 SIN3AQ96ST3 1273 aa37.27■■■■□ 3.56
TRIM3-206ENST00000528227 THSD7AQ9UPZ6 1657 aa37.27■■■■□ 3.56
TRIM3-206ENST00000528227 NRKQ7Z2Y5 1582 aa37.26■■■■□ 3.56
TRIM3-206ENST00000528227 CABP2Q9NPB3 220 aa37.26■■■■□ 3.56
TRIM3-206ENST00000528227 TRPM1Q7Z4N2 1603 aa37.25■■■■□ 3.55
TRIM3-206ENST00000528227 ZC3H6P61129 1189 aaKnown RBP37.25■■■■□ 3.55
TRIM3-206ENST00000528227 ABTB2Q8N961 1025 aa37.24■■■■□ 3.55
TRIM3-206ENST00000528227 SPATA31A1Q5TZJ5 1347 aa37.21■■■■□ 3.55
TRIM3-206ENST00000528227 USP19O94966 1318 aa37.2■■■■□ 3.55
TRIM3-206ENST00000528227 STRN4Q9NRL3 753 aa37.19■■■■□ 3.54
TRIM3-206ENST00000528227 BRD4O60885 1362 aaPredicted RBP37.17■■■■□ 3.54
TRIM3-206ENST00000528227 CPDO75976 1380 aa37.17■■■■□ 3.54
TRIM3-206ENST00000528227 NEUROD1Q13562 356 aa37.16■■■■□ 3.54
TRIM3-206ENST00000528227 LMO7Q8WWI1 1683 aa37.15■■■■□ 3.54
TRIM3-206ENST00000528227 NLRP13Q86W25 1043 aa37.14■■■■□ 3.54
TRIM3-206ENST00000528227 CABP1Q9NZU7 370 aa37.14■■■■□ 3.54
TRIM3-206ENST00000528227 SSH2Q76I76 1423 aa37.13■■■■□ 3.53
TRIM3-206ENST00000528227 CAMTA1Q9Y6Y1 1673 aa37.13■■■■□ 3.53
TRIM3-206ENST00000528227 FAM182BQ5T319 152 aa37.13■■■■□ 3.53
TRIM3-206ENST00000528227 RGPD1P0DJD0 1748 aa37.13■■■■□ 3.53
TRIM3-206ENST00000528227 USP6P35125 1406 aa37.12■■■■□ 3.53
TRIM3-206ENST00000528227 ROCK2O75116 1388 aaKnown RBP37.12■■■■□ 3.53
TRIM3-206ENST00000528227 SRCAPQ6ZRS2 3230 aa37.12■■■■□ 3.53
TRIM3-206ENST00000528227 BAG6P46379 1132 aa37.11■■■■□ 3.53
TRIM3-206ENST00000528227 EVC2Q86UK5 1308 aa37.1■■■■□ 3.53
TRIM3-206ENST00000528227 GCP02774 474 aa37.1■■■■□ 3.53
TRIM3-206ENST00000528227 EVA1CP58658 441 aa37.09■■■■□ 3.53
TRIM3-206ENST00000528227 USP35Q9P2H5 1018 aa37.06■■■■□ 3.52
TRIM3-206ENST00000528227 BARGINQ6ZT62 677 aa37.05■■■■□ 3.52
TRIM3-206ENST00000528227 LARP1Q6PKG0 1096 aaKnown RBP37.04■■■■□ 3.52
TRIM3-206ENST00000528227 TNS1Q9HBL0 1735 aaKnown RBP37.04■■■■□ 3.52
TRIM3-206ENST00000528227 SLIT3O75094 1523 aa37.03■■■■□ 3.52
TRIM3-206ENST00000528227 NLRP6P59044 892 aa37.01■■■■□ 3.52
TRIM3-206ENST00000528227 PIK3C2AO00443 1686 aa37.01■■■■□ 3.52
TRIM3-206ENST00000528227 COL5A2P05997 1499 aaPredicted RBP37.01■■■■□ 3.51
TRIM3-206ENST00000528227 DISP2A7MBM2 1401 aa37■■■■□ 3.51
TRIM3-206ENST00000528227 EN1Q05925 392 aaPredicted RBP36.99■■■■□ 3.51
TRIM3-206ENST00000528227 FAM196AQ6ZSG2 479 aa36.98■■■■□ 3.51
TRIM3-206ENST00000528227 TCP11L2Q8N4U5 519 aa36.98■■■■□ 3.51
TRIM3-206ENST00000528227 AKAP12Q02952 1782 aa36.96■■■■□ 3.51
TRIM3-206ENST00000528227 THRAP3Q9Y2W1 955 aaKnown RBP36.94■■■■□ 3.5
TRIM3-206ENST00000528227 AATKQ6ZMQ8 1374 aa36.93■■■■□ 3.5
TRIM3-206ENST00000528227 ZNF692Q9BU19 519 aaPredicted RBP36.93■■■■□ 3.5
TRIM3-206ENST00000528227 TRIM37O94972 964 aa36.92■■■■□ 3.5
TRIM3-206ENST00000528227 PDE3BQ13370 1112 aa36.92■■■■□ 3.5
TRIM3-206ENST00000528227 ZBTB7CA1YPR0 619 aa36.91■■■■□ 3.5
TRIM3-206ENST00000528227 CRB1P82279 1406 aa36.91■■■■□ 3.5
TRIM3-206ENST00000528227 TTC21BQ7Z4L5 1316 aa36.9■■■■□ 3.5
TRIM3-206ENST00000528227 PARP4Q9UKK3 1724 aaKnown RBP36.9■■■■□ 3.5
TRIM3-206ENST00000528227 COL18A1P39060 1754 aa36.89■■■■□ 3.5
TRIM3-206ENST00000528227 PSDA5PKW4 1024 aaPredicted RBP36.89■■■■□ 3.5
TRIM3-206ENST00000528227 CPSF1Q10570 1443 aaKnown RBP36.89■■■■□ 3.5
TRIM3-206ENST00000528227 SBNO2Q9Y2G9 1366 aa36.89■■■■□ 3.5
TRIM3-206ENST00000528227 LRP5O75197 1615 aa36.88■■■■□ 3.5
TRIM3-206ENST00000528227 EZH2Q15910 746 aaKnown RBP36.86■■■■□ 3.49
TRIM3-206ENST00000528227 TTC21AQ8NDW8 1320 aa36.85■■■■□ 3.49
TRIM3-206ENST00000528227 CAMKK2Q96RR4 588 aa36.84■■■■□ 3.49
TRIM3-206ENST00000528227 CARD11Q9BXL7 1154 aa36.84■■■■□ 3.49
TRIM3-206ENST00000528227 MON2Q7Z3U7 1717 aa36.82■■■■□ 3.49
TRIM3-206ENST00000528227 KTN1Q86UP2 1357 aaKnown RBP36.82■■■■□ 3.49
TRIM3-206ENST00000528227 APBA3O96018 575 aa36.81■■■■□ 3.48
TRIM3-206ENST00000528227 KCNH5Q8NCM2 988 aa36.81■■■■□ 3.48
TRIM3-206ENST00000528227 TONSLQ96HA7 1378 aa36.8■■■■□ 3.48
TRIM3-206ENST00000528227 ARHGEF25Q86VW2 580 aa36.8■■■■□ 3.48
TRIM3-206ENST00000528227 AXIN2Q9Y2T1 843 aa36.8■■■■□ 3.48
TRIM3-206ENST00000528227 PARD3Q8TEW0 1356 aa36.79■■■■□ 3.48
TRIM3-206ENST00000528227 LRRC37A3O60309 1634 aa36.77■■■■□ 3.48
TRIM3-206ENST00000528227 NFAT5O94916 1531 aa36.77■■■■□ 3.48
TRIM3-206ENST00000528227 TOM1L2Q6ZVM7 507 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms