RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
LINC00958-203ENST00000527945 SLIT2O94813 1529 aa13.08□□□□□ -0.31
LINC00958-203ENST00000527945 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
LINC00958-203ENST00000527945 TESK2Q96S53 571 aa13.08□□□□□ -0.32
LINC00958-203ENST00000527945 USP21Q9UK80 565 aa13.08□□□□□ -0.32
LINC00958-203ENST00000527945 BRD4O60885 1362 aaPredicted RBP13.07□□□□□ -0.32
LINC00958-203ENST00000527945 USP47Q96K76 1375 aa13.07□□□□□ -0.32
LINC00958-203ENST00000527945 RGS12O14924 1447 aa13.07□□□□□ -0.32
LINC00958-203ENST00000527945 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
LINC00958-203ENST00000527945 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
LINC00958-203ENST00000527945 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
LINC00958-203ENST00000527945 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
LINC00958-203ENST00000527945 MYOM1P52179 1685 aa13.06□□□□□ -0.32
LINC00958-203ENST00000527945 MARF1Q9Y4F3 1742 aaKnown RBP13.06□□□□□ -0.32
LINC00958-203ENST00000527945 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
LINC00958-203ENST00000527945 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
LINC00958-203ENST00000527945 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
LINC00958-203ENST00000527945 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
LINC00958-203ENST00000527945 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
LINC00958-203ENST00000527945 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
LINC00958-203ENST00000527945 ONECUT3O60422 494 aaPredicted RBP13.04□□□□□ -0.32
LINC00958-203ENST00000527945 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
LINC00958-203ENST00000527945 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
LINC00958-203ENST00000527945 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
LINC00958-203ENST00000527945 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
LINC00958-203ENST00000527945 GJD4Q96KN9 370 aaPredicted RBP13.03□□□□□ -0.32
LINC00958-203ENST00000527945 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
LINC00958-203ENST00000527945 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
LINC00958-203ENST00000527945 ACEP12821 1306 aa13.01□□□□□ -0.33
LINC00958-203ENST00000527945 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
LINC00958-203ENST00000527945 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
LINC00958-203ENST00000527945 SSH2Q76I76 1423 aa13□□□□□ -0.33
LINC00958-203ENST00000527945 VPS72Q15906 364 aa13□□□□□ -0.33
LINC00958-203ENST00000527945 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
LINC00958-203ENST00000527945 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
LINC00958-203ENST00000527945 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
LINC00958-203ENST00000527945 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
LINC00958-203ENST00000527945 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
LINC00958-203ENST00000527945 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
LINC00958-203ENST00000527945 USP6P35125 1406 aa12.97□□□□□ -0.33
LINC00958-203ENST00000527945 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
LINC00958-203ENST00000527945 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
LINC00958-203ENST00000527945 CABLES1Q8TDN4 633 aa12.97□□□□□ -0.33
LINC00958-203ENST00000527945 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
LINC00958-203ENST00000527945 HSPA5P11021 654 aaKnown RBP12.96□□□□□ -0.33
LINC00958-203ENST00000527945 EP400Q96L91 3159 aa12.96□□□□□ -0.33
LINC00958-203ENST00000527945 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
LINC00958-203ENST00000527945 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
LINC00958-203ENST00000527945 GLI3P10071 1580 aa12.94□□□□□ -0.34
LINC00958-203ENST00000527945 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
LINC00958-203ENST00000527945 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
LINC00958-203ENST00000527945 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
LINC00958-203ENST00000527945 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
LINC00958-203ENST00000527945 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
LINC00958-203ENST00000527945 TTC21AQ8NDW8 1320 aa12.93□□□□□ -0.34
LINC00958-203ENST00000527945 CDCA8Q53HL2 280 aa12.93□□□□□ -0.34
LINC00958-203ENST00000527945 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
LINC00958-203ENST00000527945 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
LINC00958-203ENST00000527945 USP19O94966 1318 aa12.92□□□□□ -0.34
LINC00958-203ENST00000527945 SLIT3O75094 1523 aa12.92□□□□□ -0.34
LINC00958-203ENST00000527945 CPDO75976 1380 aa12.92□□□□□ -0.34
LINC00958-203ENST00000527945 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
LINC00958-203ENST00000527945 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
LINC00958-203ENST00000527945 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
LINC00958-203ENST00000527945 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00958-203ENST00000527945 TMF1P82094 1093 aa12.9□□□□□ -0.34
LINC00958-203ENST00000527945 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.34
LINC00958-203ENST00000527945 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
LINC00958-203ENST00000527945 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
LINC00958-203ENST00000527945 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
LINC00958-203ENST00000527945 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
LINC00958-203ENST00000527945 COL18A1P39060 1754 aa12.89□□□□□ -0.35
LINC00958-203ENST00000527945 PRDM11Q9NQV5 511 aa12.89□□□□□ -0.35
LINC00958-203ENST00000527945 BTG4Q9NY30 223 aa12.89□□□□□ -0.35
LINC00958-203ENST00000527945 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
LINC00958-203ENST00000527945 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
LINC00958-203ENST00000527945 NFAT5O94916 1531 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 GCP02774 474 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 NLRP6P59044 892 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 RGPD5Q99666 1765 aa12.88□□□□□ -0.35
LINC00958-203ENST00000527945 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
LINC00958-203ENST00000527945 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
LINC00958-203ENST00000527945 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
LINC00958-203ENST00000527945 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
LINC00958-203ENST00000527945 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
LINC00958-203ENST00000527945 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
LINC00958-203ENST00000527945 LTN1O94822 1766 aa12.86□□□□□ -0.35
LINC00958-203ENST00000527945 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
LINC00958-203ENST00000527945 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
LINC00958-203ENST00000527945 SPATA31A1Q5TZJ5 1347 aa12.86□□□□□ -0.35
LINC00958-203ENST00000527945 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
LINC00958-203ENST00000527945 KRT27Q7Z3Y8 459 aa12.85□□□□□ -0.35
LINC00958-203ENST00000527945 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
LINC00958-203ENST00000527945 NME9Q86XW9 330 aa12.84□□□□□ -0.35
LINC00958-203ENST00000527945 CARD14Q9BXL6 1004 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms