RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
CAPN1-212ENST00000527887 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
CAPN1-212ENST00000527887 BTG4Q9NY30 223 aa20.34■□□□□ 0.85
CAPN1-212ENST00000527887 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
CAPN1-212ENST00000527887 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
CAPN1-212ENST00000527887 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
CAPN1-212ENST00000527887 NWD2Q9ULI1 1742 aa20.33■□□□□ 0.85
CAPN1-212ENST00000527887 SEPT12Q8IYM1 358 aa20.33■□□□□ 0.85
CAPN1-212ENST00000527887 GLI3P10071 1580 aa20.33■□□□□ 0.84
CAPN1-212ENST00000527887 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
CAPN1-212ENST00000527887 EP400Q96L91 3159 aa20.31■□□□□ 0.84
CAPN1-212ENST00000527887 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
CAPN1-212ENST00000527887 EVC2Q86UK5 1308 aa20.3■□□□□ 0.84
CAPN1-212ENST00000527887 CABP2Q9NPB3 220 aa20.3■□□□□ 0.84
CAPN1-212ENST00000527887 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
CAPN1-212ENST00000527887 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
CAPN1-212ENST00000527887 PPIP5K1Q6PFW1 1433 aa20.28■□□□□ 0.84
CAPN1-212ENST00000527887 COL14A1Q05707 1796 aaKnown RBP20.28■□□□□ 0.84
CAPN1-212ENST00000527887 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
CAPN1-212ENST00000527887 TOPAZ1Q8N9V7 1692 aa20.27■□□□□ 0.84
CAPN1-212ENST00000527887 KRT27Q7Z3Y8 459 aa20.27■□□□□ 0.84
CAPN1-212ENST00000527887 NLRP13Q86W25 1043 aa20.27■□□□□ 0.84
CAPN1-212ENST00000527887 KIAA0232Q92628 1395 aa20.26■□□□□ 0.83
CAPN1-212ENST00000527887 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
CAPN1-212ENST00000527887 SPATA31A5Q5VU36 1347 aa20.26■□□□□ 0.83
CAPN1-212ENST00000527887 SPATA31A7Q8IWB4 1347 aa20.26■□□□□ 0.83
CAPN1-212ENST00000527887 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-212ENST00000527887 ZC3H6P61129 1189 aaKnown RBP20.24■□□□□ 0.83
CAPN1-212ENST00000527887 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-212ENST00000527887 FAM98CQ17RN3 349 aaKnown RBP20.24■□□□□ 0.83
CAPN1-212ENST00000527887 ZNF692Q9BU19 519 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-212ENST00000527887 USP19O94966 1318 aa20.24■□□□□ 0.83
CAPN1-212ENST00000527887 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
CAPN1-212ENST00000527887 SF3B2Q13435 895 aaKnown RBP20.23■□□□□ 0.83
CAPN1-212ENST00000527887 NUTM2GQ5VZR2 741 aa20.23■□□□□ 0.83
CAPN1-212ENST00000527887 CPDO75976 1380 aa20.22■□□□□ 0.83
CAPN1-212ENST00000527887 A0A0G2JS52 829 aa20.22■□□□□ 0.83
CAPN1-212ENST00000527887 MYT1Q01538 1121 aa20.22■□□□□ 0.83
CAPN1-212ENST00000527887 GCP02774 474 aa20.21■□□□□ 0.83
CAPN1-212ENST00000527887 CRYBG1Q9Y4K1 1723 aa20.21■□□□□ 0.83
CAPN1-212ENST00000527887 USP6P35125 1406 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 QRICH2Q9H0J4 1663 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 NRAPQ86VF7 1730 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 EVA1CP58658 441 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 CHRNA2Q15822 529 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 SBNO2Q9Y2G9 1366 aa20.2■□□□□ 0.82
CAPN1-212ENST00000527887 CARD11Q9BXL7 1154 aa20.19■□□□□ 0.82
CAPN1-212ENST00000527887 NLRP6P59044 892 aa20.17■□□□□ 0.82
CAPN1-212ENST00000527887 STRN4Q9NRL3 753 aa20.17■□□□□ 0.82
CAPN1-212ENST00000527887 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
CAPN1-212ENST00000527887 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
CAPN1-212ENST00000527887 BARGINQ6ZT62 677 aa20.15■□□□□ 0.82
CAPN1-212ENST00000527887 TTC21AQ8NDW8 1320 aa20.14■□□□□ 0.81
CAPN1-212ENST00000527887 SLC24A1O60721 1099 aa20.14■□□□□ 0.81
CAPN1-212ENST00000527887 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
CAPN1-212ENST00000527887 PUS7Q96PZ0 661 aaKnown RBP20.13■□□□□ 0.81
CAPN1-212ENST00000527887 NRKQ7Z2Y5 1582 aa20.12■□□□□ 0.81
CAPN1-212ENST00000527887 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
CAPN1-212ENST00000527887 BRWD3Q6RI45 1802 aa20.12■□□□□ 0.81
CAPN1-212ENST00000527887 BAG6P46379 1132 aa20.12■□□□□ 0.81
CAPN1-212ENST00000527887 KCNH5Q8NCM2 988 aa20.12■□□□□ 0.81
CAPN1-212ENST00000527887 TCP11L2Q8N4U5 519 aa20.11■□□□□ 0.81
CAPN1-212ENST00000527887 SRCAPQ6ZRS2 3230 aa20.11■□□□□ 0.81
CAPN1-212ENST00000527887 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
CAPN1-212ENST00000527887 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
CAPN1-212ENST00000527887 CAMTA1Q9Y6Y1 1673 aa20.1■□□□□ 0.81
CAPN1-212ENST00000527887 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
CAPN1-212ENST00000527887 DEFB132Q7Z7B7 95 aa20.1■□□□□ 0.81
CAPN1-212ENST00000527887 FAM196AQ6ZSG2 479 aa20.09■□□□□ 0.81
CAPN1-212ENST00000527887 USP35Q9P2H5 1018 aa20.09■□□□□ 0.81
CAPN1-212ENST00000527887 SLIT3O75094 1523 aa20.08■□□□□ 0.81
CAPN1-212ENST00000527887 THSD7AQ9UPZ6 1657 aa20.08■□□□□ 0.81
CAPN1-212ENST00000527887 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
CAPN1-212ENST00000527887 C11orf95C9JLR9 678 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-212ENST00000527887 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
CAPN1-212ENST00000527887 LMO7Q8WWI1 1683 aa20.07■□□□□ 0.8
CAPN1-212ENST00000527887 COL5A2P05997 1499 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-212ENST00000527887 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-212ENST00000527887 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
CAPN1-212ENST00000527887 CRB1P82279 1406 aa20.04■□□□□ 0.8
CAPN1-212ENST00000527887 FAM182BQ5T319 152 aa20.03■□□□□ 0.8
CAPN1-212ENST00000527887 TMC1Q8TDI8 760 aa20.03■□□□□ 0.8
CAPN1-212ENST00000527887 TERF2IPQ9NYB0 399 aa20.03■□□□□ 0.8
CAPN1-212ENST00000527887 DISP2A7MBM2 1401 aa20.02■□□□□ 0.8
CAPN1-212ENST00000527887 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
CAPN1-212ENST00000527887 USP31Q70CQ4 1352 aa20.02■□□□□ 0.8
CAPN1-212ENST00000527887 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
CAPN1-212ENST00000527887 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
CAPN1-212ENST00000527887 WDR17Q8IZU2 1322 aa20.01■□□□□ 0.79
CAPN1-212ENST00000527887 NINLQ9Y2I6 1382 aa20■□□□□ 0.79
CAPN1-212ENST00000527887 TOM1L2Q6ZVM7 507 aa20■□□□□ 0.79
CAPN1-212ENST00000527887 CDCA7Q9BWT1 371 aaPredicted RBP20■□□□□ 0.79
CAPN1-212ENST00000527887 SLC12A5Q9H2X9 1139 aa20■□□□□ 0.79
CAPN1-212ENST00000527887 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
CAPN1-212ENST00000527887 EN1Q05925 392 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-212ENST00000527887 TESK2Q96S53 571 aa19.99■□□□□ 0.79
CAPN1-212ENST00000527887 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms