RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
SCN3B-204ENST00000527836 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
SCN3B-204ENST00000527836 VPS72Q15906 364 aa17.76■□□□□ 0.43
SCN3B-204ENST00000527836 ACEP12821 1306 aa17.75■□□□□ 0.43
SCN3B-204ENST00000527836 QRICH2Q9H0J4 1663 aa17.75■□□□□ 0.43
SCN3B-204ENST00000527836 GLI3P10071 1580 aa17.74■□□□□ 0.43
SCN3B-204ENST00000527836 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
SCN3B-204ENST00000527836 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
SCN3B-204ENST00000527836 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
SCN3B-204ENST00000527836 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
SCN3B-204ENST00000527836 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
SCN3B-204ENST00000527836 CABP2Q9NPB3 220 aa17.73■□□□□ 0.43
SCN3B-204ENST00000527836 ROCK2O75116 1388 aaKnown RBP17.73■□□□□ 0.43
SCN3B-204ENST00000527836 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
SCN3B-204ENST00000527836 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
SCN3B-204ENST00000527836 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
SCN3B-204ENST00000527836 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
SCN3B-204ENST00000527836 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
SCN3B-204ENST00000527836 ABTB2Q8N961 1025 aa17.71■□□□□ 0.43
SCN3B-204ENST00000527836 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
SCN3B-204ENST00000527836 POLR3AO14802 1390 aaPredicted RBP17.7■□□□□ 0.42
SCN3B-204ENST00000527836 CCDC125Q86Z20 511 aa17.7■□□□□ 0.42
SCN3B-204ENST00000527836 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
SCN3B-204ENST00000527836 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
SCN3B-204ENST00000527836 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
SCN3B-204ENST00000527836 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
SCN3B-204ENST00000527836 NRAPQ86VF7 1730 aa17.67■□□□□ 0.42
SCN3B-204ENST00000527836 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
SCN3B-204ENST00000527836 KIAA0232Q92628 1395 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 PHRF1Q9P1Y6 1649 aaKnown RBP17.66■□□□□ 0.42
SCN3B-204ENST00000527836 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
SCN3B-204ENST00000527836 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 KRT27Q7Z3Y8 459 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 NLRP13Q86W25 1043 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 CABP1Q9NZU7 370 aa17.66■□□□□ 0.42
SCN3B-204ENST00000527836 EP400Q96L91 3159 aa17.65■□□□□ 0.42
SCN3B-204ENST00000527836 EVA1CP58658 441 aa17.65■□□□□ 0.42
SCN3B-204ENST00000527836 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
SCN3B-204ENST00000527836 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
SCN3B-204ENST00000527836 BLMP54132 1417 aaPredicted RBP17.63■□□□□ 0.41
SCN3B-204ENST00000527836 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
SCN3B-204ENST00000527836 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
SCN3B-204ENST00000527836 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
SCN3B-204ENST00000527836 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
SCN3B-204ENST00000527836 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
SCN3B-204ENST00000527836 NLRP6P59044 892 aa17.61■□□□□ 0.41
SCN3B-204ENST00000527836 USP35Q9P2H5 1018 aa17.6■□□□□ 0.41
SCN3B-204ENST00000527836 NRKQ7Z2Y5 1582 aa17.59■□□□□ 0.41
SCN3B-204ENST00000527836 USP6P35125 1406 aa17.59■□□□□ 0.41
SCN3B-204ENST00000527836 GCP02774 474 aa17.59■□□□□ 0.41
SCN3B-204ENST00000527836 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
SCN3B-204ENST00000527836 USP19O94966 1318 aa17.57■□□□□ 0.4
SCN3B-204ENST00000527836 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
SCN3B-204ENST00000527836 CPDO75976 1380 aa17.55■□□□□ 0.4
SCN3B-204ENST00000527836 DEFB132Q7Z7B7 95 aa17.55■□□□□ 0.4
SCN3B-204ENST00000527836 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
SCN3B-204ENST00000527836 BAG6P46379 1132 aa17.54■□□□□ 0.4
SCN3B-204ENST00000527836 FAM182BQ5T319 152 aa17.54■□□□□ 0.4
SCN3B-204ENST00000527836 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
SCN3B-204ENST00000527836 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
SCN3B-204ENST00000527836 CAMTA1Q9Y6Y1 1673 aa17.53■□□□□ 0.4
SCN3B-204ENST00000527836 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
SCN3B-204ENST00000527836 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
SCN3B-204ENST00000527836 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
SCN3B-204ENST00000527836 THSD7AQ9UPZ6 1657 aa17.52■□□□□ 0.4
SCN3B-204ENST00000527836 SOX12O15370 315 aa17.52■□□□□ 0.4
SCN3B-204ENST00000527836 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
SCN3B-204ENST00000527836 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
SCN3B-204ENST00000527836 SBNO2Q9Y2G9 1366 aa17.52■□□□□ 0.39
SCN3B-204ENST00000527836 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
SCN3B-204ENST00000527836 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
SCN3B-204ENST00000527836 KCNH5Q8NCM2 988 aa17.51■□□□□ 0.39
SCN3B-204ENST00000527836 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
SCN3B-204ENST00000527836 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
SCN3B-204ENST00000527836 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
SCN3B-204ENST00000527836 HDGFL2Q7Z4V5 671 aaPredicted RBP17.5■□□□□ 0.39
SCN3B-204ENST00000527836 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
SCN3B-204ENST00000527836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCN3B-204ENST00000527836 THRAP3Q9Y2W1 955 aaKnown RBP17.49■□□□□ 0.39
SCN3B-204ENST00000527836 SLIT3O75094 1523 aa17.48■□□□□ 0.39
SCN3B-204ENST00000527836 TOM1L2Q6ZVM7 507 aa17.48■□□□□ 0.39
SCN3B-204ENST00000527836 COL5A2P05997 1499 aaPredicted RBP17.48■□□□□ 0.39
SCN3B-204ENST00000527836 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
SCN3B-204ENST00000527836 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
SCN3B-204ENST00000527836 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
SCN3B-204ENST00000527836 CRB1P82279 1406 aa17.47■□□□□ 0.39
SCN3B-204ENST00000527836 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
SCN3B-204ENST00000527836 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
SCN3B-204ENST00000527836 TRIM37O94972 964 aa17.46■□□□□ 0.39
SCN3B-204ENST00000527836 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
SCN3B-204ENST00000527836 EN1Q05925 392 aaPredicted RBP17.45■□□□□ 0.38
SCN3B-204ENST00000527836 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
SCN3B-204ENST00000527836 RGPD5Q99666 1765 aa17.43■□□□□ 0.38
SCN3B-204ENST00000527836 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
SCN3B-204ENST00000527836 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
SCN3B-204ENST00000527836 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
SCN3B-204ENST00000527836 APBA3O96018 575 aa17.42■□□□□ 0.38
SCN3B-204ENST00000527836 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms