RNA–Protein interactions for RNA: ENST00000527745.3

FGFR1-232, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 790 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-232ENST00000527745 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
FGFR1-232ENST00000527745 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
FGFR1-232ENST00000527745 BLMP54132 1417 aaPredicted RBP10.24□□□□□ -0.77
FGFR1-232ENST00000527745 CCDC125Q86Z20 511 aa10.23□□□□□ -0.77
FGFR1-232ENST00000527745 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
FGFR1-232ENST00000527745 NUDT16Q96DE0 195 aaKnown RBP10.23□□□□□ -0.77
FGFR1-232ENST00000527745 A0A0G2JS52 829 aa10.22□□□□□ -0.77
FGFR1-232ENST00000527745 MYT1Q01538 1121 aa10.22□□□□□ -0.77
FGFR1-232ENST00000527745 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
FGFR1-232ENST00000527745 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
FGFR1-232ENST00000527745 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
FGFR1-232ENST00000527745 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
FGFR1-232ENST00000527745 CDK19Q9BWU1 502 aa10.21□□□□□ -0.77
FGFR1-232ENST00000527745 POLR3AO14802 1390 aaPredicted RBP10.21□□□□□ -0.78
FGFR1-232ENST00000527745 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.78
FGFR1-232ENST00000527745 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
FGFR1-232ENST00000527745 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
FGFR1-232ENST00000527745 NBPF1Q3BBV0 1214 aa10.2□□□□□ -0.78
FGFR1-232ENST00000527745 KRT27Q7Z3Y8 459 aa10.2□□□□□ -0.78
FGFR1-232ENST00000527745 KIAA0232Q92628 1395 aa10.2□□□□□ -0.78
FGFR1-232ENST00000527745 PRDM11Q9NQV5 511 aa10.2□□□□□ -0.78
FGFR1-232ENST00000527745 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
FGFR1-232ENST00000527745 ACEP12821 1306 aa10.19□□□□□ -0.78
FGFR1-232ENST00000527745 CENPJQ9HC77 1338 aaPredicted RBP10.19□□□□□ -0.78
FGFR1-232ENST00000527745 SF3B2Q13435 895 aaKnown RBP10.19□□□□□ -0.78
FGFR1-232ENST00000527745 TNS1Q9HBL0 1735 aaKnown RBP10.19□□□□□ -0.78
FGFR1-232ENST00000527745 PPIP5K1Q6PFW1 1433 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 SPATA31A5Q5VU36 1347 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 SPATA31A7Q8IWB4 1347 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 DEFB132Q7Z7B7 95 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 LMO7Q8WWI1 1683 aa10.18□□□□□ -0.78
FGFR1-232ENST00000527745 SRPK2P78362 688 aaKnown RBP10.17□□□□□ -0.78
FGFR1-232ENST00000527745 CHRNA2Q15822 529 aa10.17□□□□□ -0.78
FGFR1-232ENST00000527745 NBPF8Q3BBV2 869 aa10.17□□□□□ -0.78
FGFR1-232ENST00000527745 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
FGFR1-232ENST00000527745 ZC3H6P61129 1189 aaKnown RBP10.16□□□□□ -0.78
FGFR1-232ENST00000527745 PIK3C2AO00443 1686 aa10.15□□□□□ -0.78
FGFR1-232ENST00000527745 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
FGFR1-232ENST00000527745 L3MBTL2Q969R5 705 aa10.15□□□□□ -0.78
FGFR1-232ENST00000527745 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
FGFR1-232ENST00000527745 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
FGFR1-232ENST00000527745 AKAP12Q02952 1782 aa10.15□□□□□ -0.78
FGFR1-232ENST00000527745 CAMTA1Q9Y6Y1 1673 aa10.15□□□□□ -0.79
FGFR1-232ENST00000527745 SSH2Q76I76 1423 aa10.15□□□□□ -0.79
FGFR1-232ENST00000527745 USP19O94966 1318 aa10.14□□□□□ -0.79
FGFR1-232ENST00000527745 SPATA31A1Q5TZJ5 1347 aa10.14□□□□□ -0.79
FGFR1-232ENST00000527745 BAG6P46379 1132 aa10.14□□□□□ -0.79
FGFR1-232ENST00000527745 USP6P35125 1406 aa10.14□□□□□ -0.79
FGFR1-232ENST00000527745 LRP5O75197 1615 aa10.14□□□□□ -0.79
FGFR1-232ENST00000527745 ROCK2O75116 1388 aaKnown RBP10.14□□□□□ -0.79
FGFR1-232ENST00000527745 CPDO75976 1380 aa10.14□□□□□ -0.79
FGFR1-232ENST00000527745 WNK3Q9BYP7 1800 aa10.13□□□□□ -0.79
FGFR1-232ENST00000527745 FAM182BQ5T319 152 aa10.13□□□□□ -0.79
FGFR1-232ENST00000527745 SIN3AQ96ST3 1273 aa10.13□□□□□ -0.79
FGFR1-232ENST00000527745 USP35Q9P2H5 1018 aa10.13□□□□□ -0.79
FGFR1-232ENST00000527745 PARP4Q9UKK3 1724 aaKnown RBP10.13□□□□□ -0.79
FGFR1-232ENST00000527745 BRD4O60885 1362 aaPredicted RBP10.13□□□□□ -0.79
FGFR1-232ENST00000527745 SLIT3O75094 1523 aa10.12□□□□□ -0.79
FGFR1-232ENST00000527745 COL5A2P05997 1499 aaPredicted RBP10.12□□□□□ -0.79
FGFR1-232ENST00000527745 EVA1CP58658 441 aa10.12□□□□□ -0.79
FGFR1-232ENST00000527745 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
FGFR1-232ENST00000527745 EVC2Q86UK5 1308 aa10.11□□□□□ -0.79
FGFR1-232ENST00000527745 MON2Q7Z3U7 1717 aa10.11□□□□□ -0.79
FGFR1-232ENST00000527745 DISP2A7MBM2 1401 aa10.11□□□□□ -0.79
FGFR1-232ENST00000527745 NLRP13Q86W25 1043 aa10.11□□□□□ -0.79
FGFR1-232ENST00000527745 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
FGFR1-232ENST00000527745 RREB1Q92766 1687 aa10.1□□□□□ -0.79
FGFR1-232ENST00000527745 GCP02774 474 aa10.1□□□□□ -0.79
FGFR1-232ENST00000527745 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
FGFR1-232ENST00000527745 COL18A1P39060 1754 aa10.1□□□□□ -0.79
FGFR1-232ENST00000527745 RGPD5Q99666 1765 aa10.1□□□□□ -0.79
FGFR1-232ENST00000527745 LRRC37A3O60309 1634 aa10.1□□□□□ -0.79
FGFR1-232ENST00000527745 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
FGFR1-232ENST00000527745 PSDA5PKW4 1024 aaPredicted RBP10.09□□□□□ -0.79
FGFR1-232ENST00000527745 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
FGFR1-232ENST00000527745 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
FGFR1-232ENST00000527745 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
FGFR1-232ENST00000527745 CRB1P82279 1406 aa10.08□□□□□ -0.8
FGFR1-232ENST00000527745 NUP188Q5SRE5 1749 aa10.08□□□□□ -0.8
FGFR1-232ENST00000527745 TRIM37O94972 964 aa10.08□□□□□ -0.8
FGFR1-232ENST00000527745 NLRP6P59044 892 aa10.08□□□□□ -0.8
FGFR1-232ENST00000527745 PDE3BQ13370 1112 aa10.08□□□□□ -0.8
FGFR1-232ENST00000527745 FAM196AQ6ZSG2 479 aa10.08□□□□□ -0.8
FGFR1-232ENST00000527745 SBF2Q86WG5 1849 aa10.07□□□□□ -0.8
FGFR1-232ENST00000527745 AATKQ6ZMQ8 1374 aa10.07□□□□□ -0.8
FGFR1-232ENST00000527745 THRAP3Q9Y2W1 955 aaKnown RBP10.07□□□□□ -0.8
FGFR1-232ENST00000527745 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
FGFR1-232ENST00000527745 NFAT5O94916 1531 aa10.07□□□□□ -0.8
FGFR1-232ENST00000527745 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
FGFR1-232ENST00000527745 USP54Q70EL1 1684 aa10.06□□□□□ -0.8
FGFR1-232ENST00000527745 SBNO2Q9Y2G9 1366 aa10.06□□□□□ -0.8
FGFR1-232ENST00000527745 RGPD3A6NKT7 1758 aaPredicted RBP10.06□□□□□ -0.8
FGFR1-232ENST00000527745 LTN1O94822 1766 aa10.06□□□□□ -0.8
FGFR1-232ENST00000527745 RGPD4Q7Z3J3 1758 aa10.06□□□□□ -0.8
FGFR1-232ENST00000527745 TTC21BQ7Z4L5 1316 aa10.06□□□□□ -0.8
FGFR1-232ENST00000527745 KTN1Q86UP2 1357 aaKnown RBP10.05□□□□□ -0.8
FGFR1-232ENST00000527745 PARD3Q8TEW0 1356 aa10.05□□□□□ -0.8
FGFR1-232ENST00000527745 SOX12O15370 315 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms