RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 SIN3AQ96ST3 1273 aa9.88□□□□□ -0.83
PPFIA1-209ENST00000527612 SLIT3O75094 1523 aa9.87□□□□□ -0.83
PPFIA1-209ENST00000527612 CABLES1Q8TDN4 633 aa9.87□□□□□ -0.83
PPFIA1-209ENST00000527612 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
PPFIA1-209ENST00000527612 TRPC5Q9UL62 973 aaPredicted RBP9.87□□□□□ -0.83
PPFIA1-209ENST00000527612 COL18A1P39060 1754 aa9.87□□□□□ -0.83
PPFIA1-209ENST00000527612 PPIP5K1Q6PFW1 1433 aa9.87□□□□□ -0.83
PPFIA1-209ENST00000527612 CENPJQ9HC77 1338 aaPredicted RBP9.86□□□□□ -0.83
PPFIA1-209ENST00000527612 RGPD5Q99666 1765 aa9.86□□□□□ -0.83
PPFIA1-209ENST00000527612 RGPD1P0DJD0 1748 aa9.86□□□□□ -0.83
PPFIA1-209ENST00000527612 NUDT16Q96DE0 195 aaKnown RBP9.86□□□□□ -0.83
PPFIA1-209ENST00000527612 ATAD2Q6PL18 1390 aa9.86□□□□□ -0.83
PPFIA1-209ENST00000527612 PARP4Q9UKK3 1724 aaKnown RBP9.85□□□□□ -0.83
PPFIA1-209ENST00000527612 USP6P35125 1406 aa9.85□□□□□ -0.83
PPFIA1-209ENST00000527612 PSME1Q06323 249 aa9.85□□□□□ -0.83
PPFIA1-209ENST00000527612 LTN1O94822 1766 aa9.85□□□□□ -0.83
PPFIA1-209ENST00000527612 ROCK2O75116 1388 aaKnown RBP9.85□□□□□ -0.83
PPFIA1-209ENST00000527612 SBNO2Q9Y2G9 1366 aa9.85□□□□□ -0.83
PPFIA1-209ENST00000527612 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
PPFIA1-209ENST00000527612 UNC5CLQ8IV45 518 aa9.84□□□□□ -0.83
PPFIA1-209ENST00000527612 CDK19Q9BWU1 502 aa9.84□□□□□ -0.83
PPFIA1-209ENST00000527612 ACEP12821 1306 aa9.83□□□□□ -0.84
PPFIA1-209ENST00000527612 LRRC37A3O60309 1634 aa9.83□□□□□ -0.84
PPFIA1-209ENST00000527612 GJD4Q96KN9 370 aaPredicted RBP9.83□□□□□ -0.84
PPFIA1-209ENST00000527612 MYOM1P52179 1685 aa9.83□□□□□ -0.84
PPFIA1-209ENST00000527612 CAMTA1Q9Y6Y1 1673 aa9.83□□□□□ -0.84
PPFIA1-209ENST00000527612 USP19O94966 1318 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 NFAT5O94916 1531 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 NBPF8Q3BBV2 869 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 NGDNQ8NEJ9 315 aaKnown RBP9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 KIAA0232Q92628 1395 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 CD163L1Q9NR16 1453 aa9.82□□□□□ -0.84
PPFIA1-209ENST00000527612 PLEKHG5O94827 1062 aa9.81□□□□□ -0.84
PPFIA1-209ENST00000527612 VPS72Q15906 364 aa9.81□□□□□ -0.84
PPFIA1-209ENST00000527612 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
PPFIA1-209ENST00000527612 PEAK1Q9H792 1746 aa9.81□□□□□ -0.84
PPFIA1-209ENST00000527612 RREB1Q92766 1687 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 COL5A2P05997 1499 aaPredicted RBP9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 CPDO75976 1380 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 TONSLQ96HA7 1378 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 FAM83GA6ND36 823 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 NEUROD1Q13562 356 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 ABCC6O95255 1503 aa9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 CPSF1Q10570 1443 aaKnown RBP9.8□□□□□ -0.84
PPFIA1-209ENST00000527612 BRD4O60885 1362 aaPredicted RBP9.79□□□□□ -0.84
PPFIA1-209ENST00000527612 SRPK2P78362 688 aaKnown RBP9.79□□□□□ -0.84
PPFIA1-209ENST00000527612 KIF20BQ96Q89 1820 aa9.78□□□□□ -0.84
PPFIA1-209ENST00000527612 PAK3O75914 559 aaPredicted RBP9.78□□□□□ -0.84
PPFIA1-209ENST00000527612 BTG4Q9NY30 223 aa9.78□□□□□ -0.84
PPFIA1-209ENST00000527612 BLMP54132 1417 aaPredicted RBP9.78□□□□□ -0.84
PPFIA1-209ENST00000527612 RGPD3A6NKT7 1758 aaPredicted RBP9.78□□□□□ -0.84
PPFIA1-209ENST00000527612 RGPD4Q7Z3J3 1758 aa9.78□□□□□ -0.84
PPFIA1-209ENST00000527612 NUP188Q5SRE5 1749 aa9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 TRIM26Q12899 539 aaPredicted RBP9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 SPATA31A5Q5VU36 1347 aa9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 EVC2Q86UK5 1308 aa9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 SPATA31A7Q8IWB4 1347 aa9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 FAM208AQ9UK61 1670 aaKnown RBP9.77□□□□□ -0.85
PPFIA1-209ENST00000527612 ONECUT3O60422 494 aaPredicted RBP9.76□□□□□ -0.85
PPFIA1-209ENST00000527612 NUTM2GQ5VZR2 741 aa9.76□□□□□ -0.85
PPFIA1-209ENST00000527612 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
PPFIA1-209ENST00000527612 LRP5O75197 1615 aa9.74□□□□□ -0.85
PPFIA1-209ENST00000527612 CHRNA2Q15822 529 aa9.74□□□□□ -0.85
PPFIA1-209ENST00000527612 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
PPFIA1-209ENST00000527612 CABP1Q9NZU7 370 aa9.74□□□□□ -0.85
PPFIA1-209ENST00000527612 SPATA31A1Q5TZJ5 1347 aa9.74□□□□□ -0.85
PPFIA1-209ENST00000527612 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 SHANK3Q9BYB0 1731 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 FAM98CQ17RN3 349 aaKnown RBP9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 A0A1W2PP64 1363 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 RGPD2P0DJD1 1756 aa9.73□□□□□ -0.85
PPFIA1-209ENST00000527612 ZC3H6P61129 1189 aaKnown RBP9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 CARD11Q9BXL7 1154 aa9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 CCDC9Q9Y3X0 531 aaKnown RBP9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 AATKQ6ZMQ8 1374 aa9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 KTN1Q86UP2 1357 aaKnown RBP9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 CRB1P82279 1406 aa9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
PPFIA1-209ENST00000527612 GCP02774 474 aa9.71□□□□□ -0.86
PPFIA1-209ENST00000527612 KRT27Q7Z3Y8 459 aa9.71□□□□□ -0.86
PPFIA1-209ENST00000527612 TESK2Q96S53 571 aa9.71□□□□□ -0.86
PPFIA1-209ENST00000527612 TTC21BQ7Z4L5 1316 aa9.71□□□□□ -0.86
PPFIA1-209ENST00000527612 TTC21AQ8NDW8 1320 aa9.71□□□□□ -0.86
PPFIA1-209ENST00000527612 NHSQ6T4R5 1651 aa9.71□□□□□ -0.86
PPFIA1-209ENST00000527612 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
PPFIA1-209ENST00000527612 USP31Q70CQ4 1352 aa9.7□□□□□ -0.86
PPFIA1-209ENST00000527612 USP47Q96K76 1375 aa9.7□□□□□ -0.86
PPFIA1-209ENST00000527612 LARP1Q6PKG0 1096 aaKnown RBP9.69□□□□□ -0.86
PPFIA1-209ENST00000527612 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
PPFIA1-209ENST00000527612 STRN4Q9NRL3 753 aa9.69□□□□□ -0.86
PPFIA1-209ENST00000527612 NINLQ9Y2I6 1382 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms