RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 MRGPRX2Q96LB1 330 aa17.2■□□□□ 0.34
CTNND1-217ENST00000527599 SH3BP2P78314 561 aa17.19■□□□□ 0.34
CTNND1-217ENST00000527599 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
CTNND1-217ENST00000527599 ATP1B4Q9UN42 357 aaPredicted RBP17.19■□□□□ 0.34
CTNND1-217ENST00000527599 HELBQ8NG08 1087 aaPredicted RBP17.18■□□□□ 0.34
CTNND1-217ENST00000527599 LINC01559Q495D7 138 aa17.17■□□□□ 0.34
CTNND1-217ENST00000527599 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
CTNND1-217ENST00000527599 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
CTNND1-217ENST00000527599 CYP4X1Q8N118 509 aa17.13■□□□□ 0.33
CTNND1-217ENST00000527599 LRRN4Q8WUT4 740 aa17.13■□□□□ 0.33
CTNND1-217ENST00000527599 TRAF7Q6Q0C0 670 aa17.12■□□□□ 0.33
CTNND1-217ENST00000527599 ZNF511Q8NB15 262 aa17.12■□□□□ 0.33
CTNND1-217ENST00000527599 DGAT1O75907 488 aa17.11■□□□□ 0.33
CTNND1-217ENST00000527599 RFC5P40937 340 aa17.11■□□□□ 0.33
CTNND1-217ENST00000527599 PKDCCQ504Y2 493 aa17.09■□□□□ 0.33
CTNND1-217ENST00000527599 SNIP1Q8TAD8 396 aaKnown RBP17.09■□□□□ 0.33
CTNND1-217ENST00000527599 SIAH2O43255 324 aa17.08■□□□□ 0.32
CTNND1-217ENST00000527599 AP1G2O75843 785 aa17.08■□□□□ 0.32
CTNND1-217ENST00000527599 MYT1Q01538 1121 aa17.08■□□□□ 0.32
CTNND1-217ENST00000527599 TTC24A2A3L6 582 aaPredicted RBP17.06■□□□□ 0.32
CTNND1-217ENST00000527599 J3QL48 77 aa17.06■□□□□ 0.32
CTNND1-217ENST00000527599 SMPD1P17405 629 aa17.06■□□□□ 0.32
CTNND1-217ENST00000527599 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
CTNND1-217ENST00000527599 FOXJ1Q92949 421 aa17.05■□□□□ 0.32
CTNND1-217ENST00000527599 HMX1Q9NP08 348 aaPredicted RBP17.02■□□□□ 0.32
CTNND1-217ENST00000527599 USP17L8P0C7I0 530 aa17.01■□□□□ 0.31
CTNND1-217ENST00000527599 C4orf48Q5BLP8 95 aa17.01■□□□□ 0.31
CTNND1-217ENST00000527599 NR6A1Q15406 480 aa17■□□□□ 0.31
CTNND1-217ENST00000527599 EPS8L1Q8TE68 723 aa17■□□□□ 0.31
CTNND1-217ENST00000527599 AVPP01185 164 aa16.99■□□□□ 0.31
CTNND1-217ENST00000527599 ST8SIA5O15466 376 aa16.97■□□□□ 0.31
CTNND1-217ENST00000527599 ALDH1A1P00352 501 aa16.96■□□□□ 0.31
CTNND1-217ENST00000527599 VARSP26640 1264 aaKnown RBP16.96■□□□□ 0.31
CTNND1-217ENST00000527599 TLL2Q9Y6L7 1015 aa16.96■□□□□ 0.31
CTNND1-217ENST00000527599 ARMC2Q8NEN0 867 aa16.95■□□□□ 0.3
CTNND1-217ENST00000527599 HPS1Q92902 700 aa16.95■□□□□ 0.3
CTNND1-217ENST00000527599 TMEM259Q4ZIN3 620 aa16.94■□□□□ 0.3
CTNND1-217ENST00000527599 AAASQ9NRG9 546 aa16.94■□□□□ 0.3
CTNND1-217ENST00000527599 SH3BP5LQ7L8J4 393 aa16.93■□□□□ 0.3
CTNND1-217ENST00000527599 SH3RF1Q7Z6J0 888 aa16.93■□□□□ 0.3
CTNND1-217ENST00000527599 FKBPLQ9UIM3 349 aa16.92■□□□□ 0.3
CTNND1-217ENST00000527599 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
CTNND1-217ENST00000527599 BPHLQ86WA6 291 aaPredicted RBP16.9■□□□□ 0.3
CTNND1-217ENST00000527599 CRIPAKQ8N1N5 446 aa16.9■□□□□ 0.3
CTNND1-217ENST00000527599 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
CTNND1-217ENST00000527599 AGERQ15109 404 aa16.89■□□□□ 0.29
CTNND1-217ENST00000527599 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
CTNND1-217ENST00000527599 MPNDQ8N594 471 aa16.88■□□□□ 0.29
CTNND1-217ENST00000527599 FAM174AQ8TBP5 190 aa16.87■□□□□ 0.29
CTNND1-217ENST00000527599 C1QTNF2Q9BXJ5 285 aa16.87■□□□□ 0.29
CTNND1-217ENST00000527599 SMCPP49901 116 aaPredicted RBP16.86■□□□□ 0.29
CTNND1-217ENST00000527599 GPKOWQ92917 476 aaPredicted RBP eCLIP16.86■□□□□ 0.29
CTNND1-217ENST00000527599 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
CTNND1-217ENST00000527599 CDK15Q96Q40 435 aa16.85■□□□□ 0.29
CTNND1-217ENST00000527599 OCSTAMPQ9BR26 566 aa16.85■□□□□ 0.29
CTNND1-217ENST00000527599 CTC1Q2NKJ3 1217 aa16.84■□□□□ 0.29
CTNND1-217ENST00000527599 PDXDC2PQ6P474 469 aa16.84■□□□□ 0.29
CTNND1-217ENST00000527599 AXIN1O15169 862 aa16.83■□□□□ 0.28
CTNND1-217ENST00000527599 WASF2Q9Y6W5 498 aa16.83■□□□□ 0.28
CTNND1-217ENST00000527599 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
CTNND1-217ENST00000527599 POTECB2RU33 542 aa16.82■□□□□ 0.28
CTNND1-217ENST00000527599 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
CTNND1-217ENST00000527599 ZC3H4Q9UPT8 1303 aaKnown RBP16.8■□□□□ 0.28
CTNND1-217ENST00000527599 ARID5BQ14865 1188 aa16.8■□□□□ 0.28
CTNND1-217ENST00000527599 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
CTNND1-217ENST00000527599 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
CTNND1-217ENST00000527599 GRM5P41594 1212 aa16.79■□□□□ 0.28
CTNND1-217ENST00000527599 ADH1CP00326 375 aa16.78■□□□□ 0.28
CTNND1-217ENST00000527599 ERFEQ4G0M1 354 aa16.78■□□□□ 0.28
CTNND1-217ENST00000527599 TRMT44Q8IYL2 757 aaKnown RBP16.78■□□□□ 0.28
CTNND1-217ENST00000527599 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
CTNND1-217ENST00000527599 ARHGAP9Q9BRR9 750 aa16.78■□□□□ 0.28
CTNND1-217ENST00000527599 NNTQ13423 1086 aa16.77■□□□□ 0.28
CTNND1-217ENST00000527599 NR3C2P08235 984 aa16.74■□□□□ 0.27
CTNND1-217ENST00000527599 ZNF787Q6DD87 383 aa16.74■□□□□ 0.27
CTNND1-217ENST00000527599 KLF16Q9BXK1 252 aaPredicted RBP16.73■□□□□ 0.27
CTNND1-217ENST00000527599 GPR37L1O60883 481 aa16.72■□□□□ 0.27
CTNND1-217ENST00000527599 PTK2Q05397 1052 aa16.72■□□□□ 0.27
CTNND1-217ENST00000527599 GPSM3Q9Y4H4 160 aa16.72■□□□□ 0.27
CTNND1-217ENST00000527599 MAP4K5Q9Y4K4 846 aa16.71■□□□□ 0.27
CTNND1-217ENST00000527599 ADAM32Q8TC27 787 aa16.7■□□□□ 0.26
CTNND1-217ENST00000527599 ATP13A2Q9NQ11 1180 aa16.7■□□□□ 0.26
CTNND1-217ENST00000527599 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
CTNND1-217ENST00000527599 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
CTNND1-217ENST00000527599 GMPR2Q9P2T1 348 aaKnown RBP16.69■□□□□ 0.26
CTNND1-217ENST00000527599 SOCS7O14512 581 aa16.68■□□□□ 0.26
CTNND1-217ENST00000527599 CAPN5O15484 640 aaPredicted RBP16.68■□□□□ 0.26
CTNND1-217ENST00000527599 NR5A1Q13285 461 aa16.68■□□□□ 0.26
CTNND1-217ENST00000527599 VASH1Q7L8A9 365 aaPredicted RBP16.68■□□□□ 0.26
CTNND1-217ENST00000527599 TIMP2P16035 220 aa16.67■□□□□ 0.26
CTNND1-217ENST00000527599 FSHRP23945 695 aa16.66■□□□□ 0.26
CTNND1-217ENST00000527599 WDR4P57081 412 aaKnown RBP16.64■□□□□ 0.25
CTNND1-217ENST00000527599 BMP1P13497 986 aa16.63■□□□□ 0.25
CTNND1-217ENST00000527599 TRIM46Q7Z4K8 759 aa16.63■□□□□ 0.25
CTNND1-217ENST00000527599 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
CTNND1-217ENST00000527599 ITPKCQ96DU7 683 aa16.62■□□□□ 0.25
CTNND1-217ENST00000527599 ZFAND3Q9H8U3 227 aa16.62■□□□□ 0.25
CTNND1-217ENST00000527599 FBXO45P0C2W1 286 aa16.61■□□□□ 0.25
CTNND1-217ENST00000527599 ZIC2O95409 532 aaPredicted RBP16.6■□□□□ 0.25
CTNND1-217ENST00000527599 KCTD15Q96SI1 283 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms