RNA–Protein interactions for RNA: ENST00000527333.5

CKAP5-208, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5

Gene CKAP5, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-208ENST00000527333 PTPRMP28827 1452 aa12.89□□□□□ -0.35
CKAP5-208ENST00000527333 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
CKAP5-208ENST00000527333 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
CKAP5-208ENST00000527333 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
CKAP5-208ENST00000527333 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
CKAP5-208ENST00000527333 NUDT7P0C024 238 aa12.87□□□□□ -0.35
CKAP5-208ENST00000527333 KCNV2Q8TDN2 545 aa12.87□□□□□ -0.35
CKAP5-208ENST00000527333 ADGRB3O60242 1522 aa12.87□□□□□ -0.35
CKAP5-208ENST00000527333 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
CKAP5-208ENST00000527333 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
CKAP5-208ENST00000527333 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.352e-8■■■□□ 17.4
CKAP5-208ENST00000527333 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
CKAP5-208ENST00000527333 TMEM131LA2VDJ0 1609 aa12.85□□□□□ -0.35
CKAP5-208ENST00000527333 EMP3P54852 163 aa12.85□□□□□ -0.35
CKAP5-208ENST00000527333 IDI1Q13907 227 aa12.85□□□□□ -0.35
CKAP5-208ENST00000527333 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
CKAP5-208ENST00000527333 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
CKAP5-208ENST00000527333 EVI5O60447 810 aa12.84□□□□□ -0.35
CKAP5-208ENST00000527333 MYO5BQ9ULV0 1848 aa12.83□□□□□ -0.35
CKAP5-208ENST00000527333 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
CKAP5-208ENST00000527333 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
CKAP5-208ENST00000527333 MARVELD3Q96A59 401 aa12.83□□□□□ -0.36
CKAP5-208ENST00000527333 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
CKAP5-208ENST00000527333 UBR1Q8IWV7 1749 aa12.82□□□□□ -0.36
CKAP5-208ENST00000527333 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
CKAP5-208ENST00000527333 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
CKAP5-208ENST00000527333 ERBB3P21860 1342 aa12.81□□□□□ -0.36
CKAP5-208ENST00000527333 PPLO60437 1756 aa12.8□□□□□ -0.36
CKAP5-208ENST00000527333 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
CKAP5-208ENST00000527333 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
CKAP5-208ENST00000527333 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
CKAP5-208ENST00000527333 RPGRIP1LQ68CZ1 1315 aa12.8□□□□□ -0.36
CKAP5-208ENST00000527333 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
CKAP5-208ENST00000527333 MYOM2P54296 1465 aa12.78□□□□□ -0.36
CKAP5-208ENST00000527333 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
CKAP5-208ENST00000527333 RGL3Q3MIN7 710 aa12.78□□□□□ -0.36
CKAP5-208ENST00000527333 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
CKAP5-208ENST00000527333 RALGAPBQ86X10 1494 aa12.78□□□□□ -0.36
CKAP5-208ENST00000527333 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
CKAP5-208ENST00000527333 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
CKAP5-208ENST00000527333 EIF4G2P78344 907 aaKnown RBP eCLIP12.77□□□□□ -0.37
CKAP5-208ENST00000527333 PDIA6Q15084 440 aa12.77□□□□□ -0.37
CKAP5-208ENST00000527333 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
CKAP5-208ENST00000527333 ZFYVE9O95405 1425 aa12.77□□□□□ -0.37
CKAP5-208ENST00000527333 FAM205CA6NFA0 338 aa12.76□□□□□ -0.37
CKAP5-208ENST00000527333 GPRASP1Q5JY77 1395 aa12.76□□□□□ -0.37
CKAP5-208ENST00000527333 PRAG1Q86YV5 1406 aa12.76□□□□□ -0.37
CKAP5-208ENST00000527333 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
CKAP5-208ENST00000527333 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
CKAP5-208ENST00000527333 SLIT1O75093 1534 aa12.76□□□□□ -0.37
CKAP5-208ENST00000527333 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
CKAP5-208ENST00000527333 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
CKAP5-208ENST00000527333 DCAF11Q8TEB1 546 aa12.75□□□□□ -0.37
CKAP5-208ENST00000527333 RIMS2Q9UQ26 1411 aa12.73□□□□□ -0.37
CKAP5-208ENST00000527333 TMEM2Q9UHN6 1383 aa12.73□□□□□ -0.37
CKAP5-208ENST00000527333 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
CKAP5-208ENST00000527333 THEMISQ8N1K5 641 aaPredicted RBP12.73□□□□□ -0.37
CKAP5-208ENST00000527333 KIAA1210Q9ULL0 1709 aa12.73□□□□□ -0.37
CKAP5-208ENST00000527333 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
CKAP5-208ENST00000527333 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.72□□□□□ -0.37
CKAP5-208ENST00000527333 TRPM1Q7Z4N2 1603 aa12.71□□□□□ -0.37
CKAP5-208ENST00000527333 HDGFP51858 240 aaKnown RBP12.71□□□□□ -0.37
CKAP5-208ENST00000527333 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
CKAP5-208ENST00000527333 PIK3C2GO75747 1445 aa12.71□□□□□ -0.38
CKAP5-208ENST00000527333 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
CKAP5-208ENST00000527333 POTEMA6NI47 508 aa12.7□□□□□ -0.38
CKAP5-208ENST00000527333 PTGER2P43116 358 aa12.7□□□□□ -0.38
CKAP5-208ENST00000527333 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
CKAP5-208ENST00000527333 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
CKAP5-208ENST00000527333 LAMC1P11047 1609 aa12.7□□□□□ -0.38
CKAP5-208ENST00000527333 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
CKAP5-208ENST00000527333 NBR1Q14596 966 aa12.69□□□□□ -0.38
CKAP5-208ENST00000527333 NBPF1Q3BBV0 1214 aa12.69□□□□□ -0.38
CKAP5-208ENST00000527333 DDX12PQ92771 950 aa12.69□□□□□ -0.38
CKAP5-208ENST00000527333 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
CKAP5-208ENST00000527333 USP47Q96K76 1375 aa12.69□□□□□ -0.38
CKAP5-208ENST00000527333 SETBP1Q9Y6X0 1596 aa12.68□□□□□ -0.38
CKAP5-208ENST00000527333 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
CKAP5-208ENST00000527333 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
CKAP5-208ENST00000527333 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
CKAP5-208ENST00000527333 POLR1AO95602 1720 aaPredicted RBP12.67□□□□□ -0.38
CKAP5-208ENST00000527333 PLEKHG1Q9ULL1 1385 aa12.67□□□□□ -0.38
CKAP5-208ENST00000527333 NRXN3Q9Y4C0 1643 aa12.66□□□□□ -0.38
CKAP5-208ENST00000527333 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
CKAP5-208ENST00000527333 PHF14O94880 888 aa12.66□□□□□ -0.38
CKAP5-208ENST00000527333 LTKP29376 864 aa12.66□□□□□ -0.38
CKAP5-208ENST00000527333 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
CKAP5-208ENST00000527333 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
CKAP5-208ENST00000527333 IQGAP1P46940 1657 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 SEMA3EO15041 775 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 FOSBP53539 338 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 EPAS1Q99814 870 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
CKAP5-208ENST00000527333 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
CKAP5-208ENST00000527333 NUTM2DQ5VT03 806 aaPredicted RBP12.64□□□□□ -0.39
CKAP5-208ENST00000527333 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
CKAP5-208ENST00000527333 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
CKAP5-208ENST00000527333 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms