RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MRS2Q9HD23 443 aa25.42■■□□□ 1.66
SMPD1-203ENST00000527275 GGNBP2Q9H3C7 697 aa25.4■■□□□ 1.66
SMPD1-203ENST00000527275 TTC21BQ7Z4L5 1316 aa25.39■■□□□ 1.65
SMPD1-203ENST00000527275 SSH2Q76I76 1423 aa25.39■■□□□ 1.65
SMPD1-203ENST00000527275 PSME1Q06323 249 aa25.38■■□□□ 1.65
SMPD1-203ENST00000527275 NME9Q86XW9 330 aa25.38■■□□□ 1.65
SMPD1-203ENST00000527275 NRKQ7Z2Y5 1582 aa25.37■■□□□ 1.65
SMPD1-203ENST00000527275 NSD2O96028 1365 aa25.37■■□□□ 1.65
SMPD1-203ENST00000527275 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
SMPD1-203ENST00000527275 XPCQ01831 940 aaPredicted RBP25.35■■□□□ 1.65
SMPD1-203ENST00000527275 KIF1AQ12756 1690 aa25.35■■□□□ 1.65
SMPD1-203ENST00000527275 MORC1Q86VD1 984 aa25.35■■□□□ 1.65
SMPD1-203ENST00000527275 DDX17Q92841 729 aaKnown RBP25.34■■□□□ 1.65
SMPD1-203ENST00000527275 ZRANB1Q9UGI0 708 aa25.34■■□□□ 1.65
SMPD1-203ENST00000527275 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.65
SMPD1-203ENST00000527275 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.65
SMPD1-203ENST00000527275 PAK3O75914 559 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-203ENST00000527275 TNNT2P45379 298 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-203ENST00000527275 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
SMPD1-203ENST00000527275 TTC21AQ8NDW8 1320 aa25.32■■□□□ 1.64
SMPD1-203ENST00000527275 HNRNPUQ00839 825 aaKnown RBP eCLIP25.31■■□□□ 1.64
SMPD1-203ENST00000527275 KRT28Q7Z3Y7 464 aa25.3■■□□□ 1.64
SMPD1-203ENST00000527275 PPP2R1AP30153 589 aa25.29■■□□□ 1.64
SMPD1-203ENST00000527275 NPHP3Q7Z494 1330 aa25.29■■□□□ 1.64
SMPD1-203ENST00000527275 BRD4O60885 1362 aaPredicted RBP25.28■■□□□ 1.64
SMPD1-203ENST00000527275 COG3Q96JB2 828 aa25.28■■□□□ 1.64
SMPD1-203ENST00000527275 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
SMPD1-203ENST00000527275 NLRP13Q86W25 1043 aa25.27■■□□□ 1.64
SMPD1-203ENST00000527275 ABTB2Q8N961 1025 aa25.27■■□□□ 1.64
SMPD1-203ENST00000527275 NUTM2GQ5VZR2 741 aa25.25■■□□□ 1.63
SMPD1-203ENST00000527275 PIK3C2AO00443 1686 aa25.25■■□□□ 1.63
SMPD1-203ENST00000527275 NLRP6P59044 892 aa25.24■■□□□ 1.63
SMPD1-203ENST00000527275 OVOS2A0A0J9YW53 1432 aa25.23■■□□□ 1.63
SMPD1-203ENST00000527275 OVOS2Q6IE36 1432 aa25.23■■□□□ 1.63
SMPD1-203ENST00000527275 FBLN1P23142 703 aa25.23■■□□□ 1.63
SMPD1-203ENST00000527275 TOM1O60784 492 aa25.22■■□□□ 1.63
SMPD1-203ENST00000527275 CERKQ8TCT0 537 aa25.22■■□□□ 1.63
SMPD1-203ENST00000527275 TRPM3Q9HCF6 1732 aaPredicted RBP25.22■■□□□ 1.63
SMPD1-203ENST00000527275 PXDNQ92626 1479 aa25.21■■□□□ 1.63
SMPD1-203ENST00000527275 LMOD2Q6P5Q4 547 aa25.21■■□□□ 1.63
SMPD1-203ENST00000527275 USP31Q70CQ4 1352 aa25.21■■□□□ 1.63
SMPD1-203ENST00000527275 ROBO1Q9Y6N7 1651 aa25.19■■□□□ 1.62
SMPD1-203ENST00000527275 SOS2Q07890 1332 aaPredicted RBP25.18■■□□□ 1.62
SMPD1-203ENST00000527275 IQSEC2Q5JU85 1478 aa25.18■■□□□ 1.62
SMPD1-203ENST00000527275 SBNO1A3KN83 1393 aa25.18■■□□□ 1.62
SMPD1-203ENST00000527275 UBAP1LF5GYI3 381 aa25.18■■□□□ 1.62
SMPD1-203ENST00000527275 MTHFSP49914 203 aa25.18■■□□□ 1.62
SMPD1-203ENST00000527275 PNISRQ8TF01 805 aaKnown RBP25.18■■□□□ 1.62
SMPD1-203ENST00000527275 SOX12O15370 315 aa25.17■■□□□ 1.62
SMPD1-203ENST00000527275 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
SMPD1-203ENST00000527275 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
SMPD1-203ENST00000527275 MARF1Q9Y4F3 1742 aaKnown RBP25.15■■□□□ 1.62
SMPD1-203ENST00000527275 SPATA31A3Q5VYP0 1347 aa25.15■■□□□ 1.62
SMPD1-203ENST00000527275 ALS2Q96Q42 1657 aa25.14■■□□□ 1.62
SMPD1-203ENST00000527275 POLKQ9UBT6 870 aa25.14■■□□□ 1.61
SMPD1-203ENST00000527275 AATKQ6ZMQ8 1374 aa25.13■■□□□ 1.61
SMPD1-203ENST00000527275 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
SMPD1-203ENST00000527275 PLEKHG5O94827 1062 aa25.13■■□□□ 1.61
SMPD1-203ENST00000527275 RRS1Q15050 365 aaKnown RBP25.13■■□□□ 1.61
SMPD1-203ENST00000527275 MAP2P11137 1827 aaKnown RBP25.13■■□□□ 1.61
SMPD1-203ENST00000527275 USP54Q70EL1 1684 aa25.12■■□□□ 1.61
SMPD1-203ENST00000527275 PPM1GO15355 546 aaPredicted RBP25.11■■□□□ 1.61
SMPD1-203ENST00000527275 EMILIN1Q9Y6C2 1016 aa25.11■■□□□ 1.61
SMPD1-203ENST00000527275 ZBED9Q6R2W3 1325 aa25.09■■□□□ 1.61
SMPD1-203ENST00000527275 ARHGEF10O15013 1369 aa25.08■■□□□ 1.6
SMPD1-203ENST00000527275 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
SMPD1-203ENST00000527275 USP19O94966 1318 aa25.07■■□□□ 1.6
SMPD1-203ENST00000527275 GCP02774 474 aa25.07■■□□□ 1.6
SMPD1-203ENST00000527275 KCNH5Q8NCM2 988 aa25.05■■□□□ 1.6
SMPD1-203ENST00000527275 CABLES1Q8TDN4 633 aa25.05■■□□□ 1.6
SMPD1-203ENST00000527275 CFAP53Q96M91 514 aa25.05■■□□□ 1.6
SMPD1-203ENST00000527275 MAP3K19Q56UN5 1328 aa25.05■■□□□ 1.6
SMPD1-203ENST00000527275 SMG6Q86US8 1419 aaKnown RBP25.04■■□□□ 1.6
SMPD1-203ENST00000527275 MED1Q15648 1581 aaPredicted RBP25.04■■□□□ 1.6
SMPD1-203ENST00000527275 LRRC59Q96AG4 307 aaKnown RBP25.04■■□□□ 1.6
SMPD1-203ENST00000527275 PNPLA6Q8IY17 1366 aa25.03■■□□□ 1.6
SMPD1-203ENST00000527275 SLIT3O75094 1523 aa25.03■■□□□ 1.6
SMPD1-203ENST00000527275 NFAT5O94916 1531 aa25.02■■□□□ 1.6
SMPD1-203ENST00000527275 CDK12Q9NYV4 1490 aaPredicted RBP25■■□□□ 1.59
SMPD1-203ENST00000527275 PHLPP1O60346 1717 aa24.99■■□□□ 1.59
SMPD1-203ENST00000527275 COL3A1P02461 1466 aaPredicted RBP24.99■■□□□ 1.59
SMPD1-203ENST00000527275 AMPHP49418 695 aa24.99■■□□□ 1.59
SMPD1-203ENST00000527275 INSRP06213 1382 aa24.99■■□□□ 1.59
SMPD1-203ENST00000527275 PEAK1Q9H792 1746 aa24.99■■□□□ 1.59
SMPD1-203ENST00000527275 HSP90AB2PQ58FF8 381 aa24.98■■□□□ 1.59
SMPD1-203ENST00000527275 WDR43Q15061 677 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMPD1-203ENST00000527275 SUPT16HQ9Y5B9 1047 aaKnown RBP24.98■■□□□ 1.59
SMPD1-203ENST00000527275 ZC3H6P61129 1189 aaKnown RBP24.97■■□□□ 1.59
SMPD1-203ENST00000527275 ADAMTS8Q9UP79 889 aa24.97■■□□□ 1.59
SMPD1-203ENST00000527275 COL16A1Q07092 1604 aaPredicted RBP24.97■■□□□ 1.59
SMPD1-203ENST00000527275 DIAPH1O60610 1272 aaKnown RBP24.97■■□□□ 1.59
SMPD1-203ENST00000527275 ARHGEF25Q86VW2 580 aa24.97■■□□□ 1.59
SMPD1-203ENST00000527275 FLT4P35916 1363 aa24.97■■□□□ 1.59
SMPD1-203ENST00000527275 LTN1O94822 1766 aa24.96■■□□□ 1.59
SMPD1-203ENST00000527275 ZBTB7CA1YPR0 619 aa24.96■■□□□ 1.59
SMPD1-203ENST00000527275 CRYBG1Q9Y4K1 1723 aa24.96■■□□□ 1.59
SMPD1-203ENST00000527275 PHRF1Q9P1Y6 1649 aaKnown RBP24.96■■□□□ 1.59
SMPD1-203ENST00000527275 SHPRHQ149N8 1683 aa24.95■■□□□ 1.59
SMPD1-203ENST00000527275 HOXC9P31274 260 aa24.94■■□□□ 1.58
SMPD1-203ENST00000527275 KIF24Q5T7B8 1368 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms