RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
CTSB-213ENST00000527215 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
CTSB-213ENST00000527215 POLR3AO14802 1390 aaPredicted RBP23.01■■□□□ 1.27
CTSB-213ENST00000527215 PHRF1Q9P1Y6 1649 aaKnown RBP23.01■■□□□ 1.27
CTSB-213ENST00000527215 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
CTSB-213ENST00000527215 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
CTSB-213ENST00000527215 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
CTSB-213ENST00000527215 RALGAPBQ86X10 1494 aa23■■□□□ 1.27
CTSB-213ENST00000527215 ACEP12821 1306 aa23■■□□□ 1.27
CTSB-213ENST00000527215 PLEKHG3A1L390 1219 aa22.99■■□□□ 1.27
CTSB-213ENST00000527215 NRAPQ86VF7 1730 aa22.98■■□□□ 1.27
CTSB-213ENST00000527215 COL14A1Q05707 1796 aaKnown RBP22.98■■□□□ 1.27
CTSB-213ENST00000527215 GLI3P10071 1580 aa22.96■■□□□ 1.27
CTSB-213ENST00000527215 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
CTSB-213ENST00000527215 EVC2Q86UK5 1308 aa22.95■■□□□ 1.26
CTSB-213ENST00000527215 UNC5CLQ8IV45 518 aa22.95■■□□□ 1.26
CTSB-213ENST00000527215 CARD11Q9BXL7 1154 aa22.94■■□□□ 1.26
CTSB-213ENST00000527215 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
CTSB-213ENST00000527215 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
CTSB-213ENST00000527215 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
CTSB-213ENST00000527215 NUTM2GQ5VZR2 741 aa22.9■■□□□ 1.26
CTSB-213ENST00000527215 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
CTSB-213ENST00000527215 NRKQ7Z2Y5 1582 aa22.89■■□□□ 1.26
CTSB-213ENST00000527215 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.25
CTSB-213ENST00000527215 USP6P35125 1406 aa22.87■■□□□ 1.25
CTSB-213ENST00000527215 PIK3C2AO00443 1686 aa22.87■■□□□ 1.25
CTSB-213ENST00000527215 MON2Q7Z3U7 1717 aa22.86■■□□□ 1.25
CTSB-213ENST00000527215 ABTB2Q8N961 1025 aa22.86■■□□□ 1.25
CTSB-213ENST00000527215 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
CTSB-213ENST00000527215 VPS72Q15906 364 aa22.85■■□□□ 1.25
CTSB-213ENST00000527215 BTG4Q9NY30 223 aa22.85■■□□□ 1.25
CTSB-213ENST00000527215 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
CTSB-213ENST00000527215 KIAA0232Q92628 1395 aa22.84■■□□□ 1.25
CTSB-213ENST00000527215 CCDC125Q86Z20 511 aa22.83■■□□□ 1.25
CTSB-213ENST00000527215 PRDM11Q9NQV5 511 aa22.83■■□□□ 1.25
CTSB-213ENST00000527215 CCDC9Q9Y3X0 531 aaKnown RBP22.83■■□□□ 1.25
CTSB-213ENST00000527215 SSH2Q76I76 1423 aa22.82■■□□□ 1.24
CTSB-213ENST00000527215 USP19O94966 1318 aa22.81■■□□□ 1.24
CTSB-213ENST00000527215 ZC3H6P61129 1189 aaKnown RBP22.8■■□□□ 1.24
CTSB-213ENST00000527215 LMO7Q8WWI1 1683 aa22.8■■□□□ 1.24
CTSB-213ENST00000527215 EP400Q96L91 3159 aa22.79■■□□□ 1.24
CTSB-213ENST00000527215 CHRNA2Q15822 529 aa22.79■■□□□ 1.24
CTSB-213ENST00000527215 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
CTSB-213ENST00000527215 CPSF1Q10570 1443 aaKnown RBP22.78■■□□□ 1.24
CTSB-213ENST00000527215 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
CTSB-213ENST00000527215 SLIT3O75094 1523 aa22.77■■□□□ 1.24
CTSB-213ENST00000527215 ZNF692Q9BU19 519 aaPredicted RBP22.76■■□□□ 1.23
CTSB-213ENST00000527215 NLRP6P59044 892 aa22.75■■□□□ 1.23
CTSB-213ENST00000527215 SEPT12Q8IYM1 358 aa22.75■■□□□ 1.23
CTSB-213ENST00000527215 CPDO75976 1380 aa22.75■■□□□ 1.23
CTSB-213ENST00000527215 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
CTSB-213ENST00000527215 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 CD163L1Q9NR16 1453 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 ST20-MTHFSA0A0A6YYL1 179 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 ONECUT3O60422 494 aaPredicted RBP22.74■■□□□ 1.23
CTSB-213ENST00000527215 GCP02774 474 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 TTC21BQ7Z4L5 1316 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 THSD7AQ9UPZ6 1657 aa22.74■■□□□ 1.23
CTSB-213ENST00000527215 BLMP54132 1417 aaPredicted RBP22.74■■□□□ 1.23
CTSB-213ENST00000527215 RGPD5Q99666 1765 aa22.73■■□□□ 1.23
CTSB-213ENST00000527215 TESK2Q96S53 571 aa22.73■■□□□ 1.23
CTSB-213ENST00000527215 USP54Q70EL1 1684 aa22.73■■□□□ 1.23
CTSB-213ENST00000527215 SPATA31A5Q5VU36 1347 aa22.73■■□□□ 1.23
CTSB-213ENST00000527215 SPATA31A7Q8IWB4 1347 aa22.73■■□□□ 1.23
CTSB-213ENST00000527215 COL18A1P39060 1754 aa22.72■■□□□ 1.23
CTSB-213ENST00000527215 TIMELESSQ9UNS1 1208 aa22.72■■□□□ 1.23
CTSB-213ENST00000527215 FAM98CQ17RN3 349 aaKnown RBP22.71■■□□□ 1.23
CTSB-213ENST00000527215 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
CTSB-213ENST00000527215 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
CTSB-213ENST00000527215 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
CTSB-213ENST00000527215 A0A0G2JS52 829 aa22.7■■□□□ 1.22
CTSB-213ENST00000527215 MYT1Q01538 1121 aa22.7■■□□□ 1.22
CTSB-213ENST00000527215 SF3B2Q13435 895 aaKnown RBP22.7■■□□□ 1.22
CTSB-213ENST00000527215 USP47Q96K76 1375 aa22.7■■□□□ 1.22
CTSB-213ENST00000527215 PUS7Q96PZ0 661 aaKnown RBP22.68■■□□□ 1.22
CTSB-213ENST00000527215 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
CTSB-213ENST00000527215 SPATA31A1Q5TZJ5 1347 aa22.67■■□□□ 1.22
CTSB-213ENST00000527215 LTN1O94822 1766 aa22.66■■□□□ 1.22
CTSB-213ENST00000527215 ZBTB7CA1YPR0 619 aa22.66■■□□□ 1.22
CTSB-213ENST00000527215 EVA1CP58658 441 aa22.66■■□□□ 1.22
CTSB-213ENST00000527215 KRT27Q7Z3Y8 459 aa22.66■■□□□ 1.22
CTSB-213ENST00000527215 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
CTSB-213ENST00000527215 NFAT5O94916 1531 aa22.66■■□□□ 1.22
CTSB-213ENST00000527215 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
CTSB-213ENST00000527215 A0A1W2PP64 1363 aa22.65■■□□□ 1.22
CTSB-213ENST00000527215 HDGFL2Q7Z4V5 671 aaPredicted RBP22.65■■□□□ 1.22
CTSB-213ENST00000527215 SLC24A1O60721 1099 aa22.64■■□□□ 1.21
CTSB-213ENST00000527215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.64■■□□□ 1.21
CTSB-213ENST00000527215 EDC4Q6P2E9 1401 aaKnown RBP22.64■■□□□ 1.21
CTSB-213ENST00000527215 WNK3Q9BYP7 1800 aa22.64■■□□□ 1.21
CTSB-213ENST00000527215 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
CTSB-213ENST00000527215 LARP1Q6PKG0 1096 aaKnown RBP22.63■■□□□ 1.21
CTSB-213ENST00000527215 TERF2IPQ9NYB0 399 aa22.63■■□□□ 1.21
CTSB-213ENST00000527215 SOX12O15370 315 aa22.62■■□□□ 1.21
CTSB-213ENST00000527215 USP35Q9P2H5 1018 aa22.62■■□□□ 1.21
CTSB-213ENST00000527215 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
CTSB-213ENST00000527215 NME9Q86XW9 330 aa22.61■■□□□ 1.21
CTSB-213ENST00000527215 KCNH5Q8NCM2 988 aa22.61■■□□□ 1.21
CTSB-213ENST00000527215 USP31Q70CQ4 1352 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms