RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-218ENST00000527118 NRAPQ86VF7 1730 aa22.45■■□□□ 1.19
RBBP4-218ENST00000527118 BRWD3Q6RI45 1802 aa22.45■■□□□ 1.19
RBBP4-218ENST00000527118 FAM83GA6ND36 823 aa22.44■■□□□ 1.18
RBBP4-218ENST00000527118 COL14A1Q05707 1796 aaKnown RBP22.43■■□□□ 1.18
RBBP4-218ENST00000527118 ATAD2Q6PL18 1390 aa22.43■■□□□ 1.18
RBBP4-218ENST00000527118 ACEP12821 1306 aa22.43■■□□□ 1.18
RBBP4-218ENST00000527118 CCDC61Q9Y6R9 512 aa22.43■■□□□ 1.18
RBBP4-218ENST00000527118 PHRF1Q9P1Y6 1649 aaKnown RBP22.42■■□□□ 1.18
RBBP4-218ENST00000527118 POLR3AO14802 1390 aaPredicted RBP22.42■■□□□ 1.18
RBBP4-218ENST00000527118 SRPK2P78362 688 aaKnown RBP22.42■■□□□ 1.18
RBBP4-218ENST00000527118 CABP2Q9NPB3 220 aa22.41■■□□□ 1.18
RBBP4-218ENST00000527118 ROCK2O75116 1388 aaKnown RBP22.4■■□□□ 1.18
RBBP4-218ENST00000527118 CCDC9Q9Y3X0 531 aaKnown RBP22.4■■□□□ 1.18
RBBP4-218ENST00000527118 PPIP5K1Q6PFW1 1433 aa22.4■■□□□ 1.18
RBBP4-218ENST00000527118 PLEKHG3A1L390 1219 aa22.39■■□□□ 1.17
RBBP4-218ENST00000527118 VPS72Q15906 364 aa22.39■■□□□ 1.17
RBBP4-218ENST00000527118 NBPF8Q3BBV2 869 aa22.39■■□□□ 1.17
RBBP4-218ENST00000527118 NUTM2GQ5VZR2 741 aa22.39■■□□□ 1.17
RBBP4-218ENST00000527118 EP400Q96L91 3159 aa22.38■■□□□ 1.17
RBBP4-218ENST00000527118 BTG4Q9NY30 223 aa22.37■■□□□ 1.17
RBBP4-218ENST00000527118 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
RBBP4-218ENST00000527118 PRDM11Q9NQV5 511 aa22.33■■□□□ 1.17
RBBP4-218ENST00000527118 SEPT12Q8IYM1 358 aa22.32■■□□□ 1.16
RBBP4-218ENST00000527118 ABTB2Q8N961 1025 aa22.32■■□□□ 1.16
RBBP4-218ENST00000527118 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
RBBP4-218ENST00000527118 NRKQ7Z2Y5 1582 aa22.32■■□□□ 1.16
RBBP4-218ENST00000527118 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
RBBP4-218ENST00000527118 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
RBBP4-218ENST00000527118 CABP1Q9NZU7 370 aa22.31■■□□□ 1.16
RBBP4-218ENST00000527118 ZC3H6P61129 1189 aaKnown RBP22.3■■□□□ 1.16
RBBP4-218ENST00000527118 CHRNA2Q15822 529 aa22.3■■□□□ 1.16
RBBP4-218ENST00000527118 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
RBBP4-218ENST00000527118 A0A0G2JS52 829 aa22.28■■□□□ 1.16
RBBP4-218ENST00000527118 ONECUT3O60422 494 aaPredicted RBP22.28■■□□□ 1.16
RBBP4-218ENST00000527118 MYT1Q01538 1121 aa22.28■■□□□ 1.16
RBBP4-218ENST00000527118 USP6P35125 1406 aa22.27■■□□□ 1.16
RBBP4-218ENST00000527118 FAM98CQ17RN3 349 aaKnown RBP22.27■■□□□ 1.16
RBBP4-218ENST00000527118 PIK3C2AO00443 1686 aa22.25■■□□□ 1.15
RBBP4-218ENST00000527118 USP19O94966 1318 aa22.25■■□□□ 1.15
RBBP4-218ENST00000527118 SPATA31A5Q5VU36 1347 aa22.25■■□□□ 1.15
RBBP4-218ENST00000527118 SPATA31A7Q8IWB4 1347 aa22.25■■□□□ 1.15
RBBP4-218ENST00000527118 KRT27Q7Z3Y8 459 aa22.24■■□□□ 1.15
RBBP4-218ENST00000527118 CARD11Q9BXL7 1154 aa22.24■■□□□ 1.15
RBBP4-218ENST00000527118 STRN4Q9NRL3 753 aa22.24■■□□□ 1.15
RBBP4-218ENST00000527118 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
RBBP4-218ENST00000527118 CCDC125Q86Z20 511 aa22.23■■□□□ 1.15
RBBP4-218ENST00000527118 LMO7Q8WWI1 1683 aa22.23■■□□□ 1.15
RBBP4-218ENST00000527118 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
RBBP4-218ENST00000527118 BRD4O60885 1362 aaPredicted RBP22.22■■□□□ 1.15
RBBP4-218ENST00000527118 CAMTA1Q9Y6Y1 1673 aa22.21■■□□□ 1.15
RBBP4-218ENST00000527118 BLMP54132 1417 aaPredicted RBP22.21■■□□□ 1.15
RBBP4-218ENST00000527118 CPDO75976 1380 aa22.2■■□□□ 1.14
RBBP4-218ENST00000527118 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
RBBP4-218ENST00000527118 GCP02774 474 aa22.19■■□□□ 1.14
RBBP4-218ENST00000527118 NLRP6P59044 892 aa22.19■■□□□ 1.14
RBBP4-218ENST00000527118 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
RBBP4-218ENST00000527118 MON2Q7Z3U7 1717 aa22.19■■□□□ 1.14
RBBP4-218ENST00000527118 SLIT3O75094 1523 aa22.18■■□□□ 1.14
RBBP4-218ENST00000527118 SBNO2Q9Y2G9 1366 aa22.18■■□□□ 1.14
RBBP4-218ENST00000527118 EVA1CP58658 441 aa22.18■■□□□ 1.14
RBBP4-218ENST00000527118 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
RBBP4-218ENST00000527118 ZBTB7CA1YPR0 619 aa22.16■■□□□ 1.14
RBBP4-218ENST00000527118 FAM182BQ5T319 152 aa22.15■■□□□ 1.14
RBBP4-218ENST00000527118 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
RBBP4-218ENST00000527118 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.14
RBBP4-218ENST00000527118 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.14
RBBP4-218ENST00000527118 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
RBBP4-218ENST00000527118 LARP1Q6PKG0 1096 aaKnown RBP22.14■■□□□ 1.13
RBBP4-218ENST00000527118 DEFB132Q7Z7B7 95 aa22.14■■□□□ 1.13
RBBP4-218ENST00000527118 ZNF692Q9BU19 519 aaPredicted RBP22.14■■□□□ 1.13
RBBP4-218ENST00000527118 KTN1Q86UP2 1357 aaKnown RBP22.13■■□□□ 1.13
RBBP4-218ENST00000527118 COL18A1P39060 1754 aa22.13■■□□□ 1.13
RBBP4-218ENST00000527118 RGPD1P0DJD0 1748 aa22.13■■□□□ 1.13
RBBP4-218ENST00000527118 COL5A2P05997 1499 aaPredicted RBP22.13■■□□□ 1.13
RBBP4-218ENST00000527118 CD163L1Q9NR16 1453 aa22.09■■□□□ 1.13
RBBP4-218ENST00000527118 TTC21AQ8NDW8 1320 aa22.09■■□□□ 1.13
RBBP4-218ENST00000527118 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
RBBP4-218ENST00000527118 SOX12O15370 315 aa22.09■■□□□ 1.13
RBBP4-218ENST00000527118 TMC1Q8TDI8 760 aa22.09■■□□□ 1.13
RBBP4-218ENST00000527118 ZRANB1Q9UGI0 708 aa22.09■■□□□ 1.13
RBBP4-218ENST00000527118 AATKQ6ZMQ8 1374 aa22.08■■□□□ 1.12
RBBP4-218ENST00000527118 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
RBBP4-218ENST00000527118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.07■■□□□ 1.12
RBBP4-218ENST00000527118 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
RBBP4-218ENST00000527118 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
RBBP4-218ENST00000527118 SLC12A5Q9H2X9 1139 aa22.06■■□□□ 1.12
RBBP4-218ENST00000527118 WNK3Q9BYP7 1800 aa22.06■■□□□ 1.12
RBBP4-218ENST00000527118 PARP4Q9UKK3 1724 aaKnown RBP22.06■■□□□ 1.12
RBBP4-218ENST00000527118 NFAT5O94916 1531 aa22.06■■□□□ 1.12
RBBP4-218ENST00000527118 USP54Q70EL1 1684 aa22.05■■□□□ 1.12
RBBP4-218ENST00000527118 CRB1P82279 1406 aa22.05■■□□□ 1.12
RBBP4-218ENST00000527118 LTN1O94822 1766 aa22.04■■□□□ 1.12
RBBP4-218ENST00000527118 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
RBBP4-218ENST00000527118 TESK2Q96S53 571 aa22.04■■□□□ 1.12
RBBP4-218ENST00000527118 BAG6P46379 1132 aa22.03■■□□□ 1.12
RBBP4-218ENST00000527118 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
RBBP4-218ENST00000527118 ARHGEF25Q86VW2 580 aa22.03■■□□□ 1.12
RBBP4-218ENST00000527118 AXIN2Q9Y2T1 843 aa22.03■■□□□ 1.12
RBBP4-218ENST00000527118 NME9Q86XW9 330 aa22.02■■□□□ 1.12
RBBP4-218ENST00000527118 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms