RNA–Protein interactions for RNA: ENST00000526884.1

NFRKB-204, Transcript of nuclear factor related to kappaB binding protein, human

TSL 3

Gene NFRKB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFRKB-204	ENST00000526884	CABP2	Q9NPB3	220 aa		33.77	■■■■□ 3
NFRKB-204	ENST00000526884	AKAP12	Q02952	1782 aa		33.75	■■■□□ 2.99
NFRKB-204	ENST00000526884	RXRB	P28702	533 aa		33.75	■■■□□ 2.99
NFRKB-204	ENST00000526884	HAP1	P54257	671 aa	Predicted RBP	33.75	■■■□□ 2.99
NFRKB-204	ENST00000526884	USP21	Q9UK80	565 aa		33.74	■■■□□ 2.99
NFRKB-204	ENST00000526884	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.74	■■■□□ 2.99
NFRKB-204	ENST00000526884	SLIT2	O94813	1529 aa		33.73	■■■□□ 2.99
NFRKB-204	ENST00000526884	ATAD2	Q6PL18	1390 aa		33.72	■■■□□ 2.99
NFRKB-204	ENST00000526884	ATRN	O75882	1429 aa		33.7	■■■□□ 2.99
NFRKB-204	ENST00000526884	BCL9L	Q86UU0	1499 aa		33.7	■■■□□ 2.99
NFRKB-204	ENST00000526884	PAK3	O75914	559 aa	Predicted RBP	33.7	■■■□□ 2.99
NFRKB-204	ENST00000526884	QTRT2	Q9H974	415 aa	Known RBP	33.7	■■■□□ 2.99
NFRKB-204	ENST00000526884	TRPC5	Q9UL62	973 aa	Predicted RBP	33.7	■■■□□ 2.99
NFRKB-204	ENST00000526884	COL14A1	Q05707	1796 aa	Known RBP	33.7	■■■□□ 2.98
NFRKB-204	ENST00000526884	RBM6	P78332	1123 aa	Known RBP	33.69	■■■□□ 2.98
NFRKB-204	ENST00000526884	CABLES1	Q8TDN4	633 aa		33.67	■■■□□ 2.98
NFRKB-204	ENST00000526884	USP6	P35125	1406 aa		33.66	■■■□□ 2.98
NFRKB-204	ENST00000526884	SLC24A1	O60721	1099 aa		33.65	■■■□□ 2.98
NFRKB-204	ENST00000526884	CABP1	Q9NZU7	370 aa		33.64	■■■□□ 2.98
NFRKB-204	ENST00000526884	MON2	Q7Z3U7	1717 aa		33.64	■■■□□ 2.98
NFRKB-204	ENST00000526884	NRAP	Q86VF7	1730 aa		33.63	■■■□□ 2.97
NFRKB-204	ENST00000526884	NRK	Q7Z2Y5	1582 aa		33.61	■■■□□ 2.97
NFRKB-204	ENST00000526884	CCER1	Q8TC90	406 aa	Predicted RBP	33.61	■■■□□ 2.97
NFRKB-204	ENST00000526884	UNC5CL	Q8IV45	518 aa		33.6	■■■□□ 2.97
NFRKB-204	ENST00000526884	PUS7	Q96PZ0	661 aa	Known RBP	33.6	■■■□□ 2.97
NFRKB-204	ENST00000526884	RGS12	O14924	1447 aa		33.6	■■■□□ 2.97
NFRKB-204	ENST00000526884	ZNF692	Q9BU19	519 aa	Predicted RBP	33.58	■■■□□ 2.97
NFRKB-204	ENST00000526884	SSH2	Q76I76	1423 aa		33.57	■■■□□ 2.96
NFRKB-204	ENST00000526884	PIK3C2A	O00443	1686 aa		33.57	■■■□□ 2.96
NFRKB-204	ENST00000526884	CPSF1	Q10570	1443 aa	Known RBP	33.56	■■■□□ 2.96
NFRKB-204	ENST00000526884	ABTB2	Q8N961	1025 aa		33.56	■■■□□ 2.96
NFRKB-204	ENST00000526884	USP47	Q96K76	1375 aa		33.56	■■■□□ 2.96
NFRKB-204	ENST00000526884	PLEKHG5	O94827	1062 aa		33.55	■■■□□ 2.96
NFRKB-204	ENST00000526884	USP19	O94966	1318 aa		33.54	■■■□□ 2.96
NFRKB-204	ENST00000526884	GLI3	P10071	1580 aa		33.53	■■■□□ 2.96
NFRKB-204	ENST00000526884	ST20-MTHFS	A0A0A6YYL1	179 aa		33.53	■■■□□ 2.96
NFRKB-204	ENST00000526884	TESK2	Q96S53	571 aa		33.53	■■■□□ 2.96
NFRKB-204	ENST00000526884	NLRP13	Q86W25	1043 aa		33.52	■■■□□ 2.96
NFRKB-204	ENST00000526884	NINL	Q9Y2I6	1382 aa		33.51	■■■□□ 2.96
NFRKB-204	ENST00000526884	FAM83G	A6ND36	823 aa		33.51	■■■□□ 2.95
NFRKB-204	ENST00000526884	GJD4	Q96KN9	370 aa	Predicted RBP	33.51	■■■□□ 2.95
NFRKB-204	ENST00000526884	SLIT3	O75094	1523 aa		33.49	■■■□□ 2.95
NFRKB-204	ENST00000526884	USP54	Q70EL1	1684 aa		33.49	■■■□□ 2.95
NFRKB-204	ENST00000526884	VPS72	Q15906	364 aa		33.48	■■■□□ 2.95
NFRKB-204	ENST00000526884	TTC21A	Q8NDW8	1320 aa		33.48	■■■□□ 2.95
NFRKB-204	ENST00000526884	KTN1	Q86UP2	1357 aa	Known RBP	33.47	■■■□□ 2.95
NFRKB-204	ENST00000526884	PRDM11	Q9NQV5	511 aa		33.47	■■■□□ 2.95
NFRKB-204	ENST00000526884	CPD	O75976	1380 aa		33.47	■■■□□ 2.95
NFRKB-204	ENST00000526884	KIAA0232	Q92628	1395 aa		33.47	■■■□□ 2.95
NFRKB-204	ENST00000526884	CD163L1	Q9NR16	1453 aa		33.46	■■■□□ 2.95
NFRKB-204	ENST00000526884	NUTM2G	Q5VZR2	741 aa		33.46	■■■□□ 2.95
NFRKB-204	ENST00000526884	LMO7	Q8WWI1	1683 aa		33.44	■■■□□ 2.94
NFRKB-204	ENST00000526884	BTG4	Q9NY30	223 aa		33.43	■■■□□ 2.94
NFRKB-204	ENST00000526884	TTC21B	Q7Z4L5	1316 aa		33.43	■■■□□ 2.94
NFRKB-204	ENST00000526884	NLRP6	P59044	892 aa		33.4	■■■□□ 2.94
NFRKB-204	ENST00000526884	TMF1	P82094	1093 aa		33.4	■■■□□ 2.94
NFRKB-204	ENST00000526884	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.4	■■■□□ 2.94
NFRKB-204	ENST00000526884	BRWD3	Q6RI45	1802 aa		33.39	■■■□□ 2.94
NFRKB-204	ENST00000526884	TMC1	Q8TDI8	760 aa		33.39	■■■□□ 2.94
NFRKB-204	ENST00000526884	TERF2IP	Q9NYB0	399 aa		33.39	■■■□□ 2.94
NFRKB-204	ENST00000526884	EDC4	Q6P2E9	1401 aa	Known RBP	33.38	■■■□□ 2.93
NFRKB-204	ENST00000526884	GC	P02774	474 aa		33.38	■■■□□ 2.93
NFRKB-204	ENST00000526884	ZC3H6	P61129	1189 aa	Known RBP	33.37	■■■□□ 2.93
NFRKB-204	ENST00000526884	CDCA8	Q53HL2	280 aa		33.36	■■■□□ 2.93
NFRKB-204	ENST00000526884		A0A1W2PP64	1363 aa		33.35	■■■□□ 2.93
NFRKB-204	ENST00000526884	SLC12A5	Q9H2X9	1139 aa		33.34	■■■□□ 2.93
NFRKB-204	ENST00000526884	CCDC9	Q9Y3X0	531 aa	Known RBP	33.34	■■■□□ 2.93
NFRKB-204	ENST00000526884	KCNH5	Q8NCM2	988 aa		33.32	■■■□□ 2.92
NFRKB-204	ENST00000526884	CAMTA1	Q9Y6Y1	1673 aa		33.32	■■■□□ 2.92
NFRKB-204	ENST00000526884	USP31	Q70CQ4	1352 aa		33.32	■■■□□ 2.92
NFRKB-204	ENST00000526884	ONECUT3	O60422	494 aa	Predicted RBP	33.31	■■■□□ 2.92
NFRKB-204	ENST00000526884	CHRNA2	Q15822	529 aa		33.31	■■■□□ 2.92
NFRKB-204	ENST00000526884	ABCC6	O95255	1503 aa		33.31	■■■□□ 2.92
NFRKB-204	ENST00000526884	COL18A1	P39060	1754 aa		33.31	■■■□□ 2.92
NFRKB-204	ENST00000526884	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.3	■■■□□ 2.92
NFRKB-204	ENST00000526884	MYOM1	P52179	1685 aa		33.29	■■■□□ 2.92
NFRKB-204	ENST00000526884	SPATA31A5	Q5VU36	1347 aa		33.29	■■■□□ 2.92
NFRKB-204	ENST00000526884	SPATA31A7	Q8IWB4	1347 aa		33.29	■■■□□ 2.92
NFRKB-204	ENST00000526884	NFAT5	O94916	1531 aa		33.29	■■■□□ 2.92
NFRKB-204	ENST00000526884	THSD7A	Q9UPZ6	1657 aa		33.29	■■■□□ 2.92
NFRKB-204	ENST00000526884	AATK	Q6ZMQ8	1374 aa		33.28	■■■□□ 2.92
NFRKB-204	ENST00000526884	ANKRD36B	Q8N2N9	1353 aa		33.28	■■■□□ 2.92
NFRKB-204	ENST00000526884	LTN1	O94822	1766 aa		33.26	■■■□□ 2.91
NFRKB-204	ENST00000526884	EP400	Q96L91	3159 aa		33.25	■■■□□ 2.91
NFRKB-204	ENST00000526884	COL5A2	P05997	1499 aa	Predicted RBP	33.25	■■■□□ 2.91
NFRKB-204	ENST00000526884	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.24	■■■□□ 2.91
NFRKB-204	ENST00000526884	RGPD5	Q99666	1765 aa		33.24	■■■□□ 2.91
NFRKB-204	ENST00000526884	SEPT12	Q8IYM1	358 aa		33.23	■■■□□ 2.91
NFRKB-204	ENST00000526884	SPATA31A1	Q5TZJ5	1347 aa		33.22	■■■□□ 2.91
NFRKB-204	ENST00000526884	OVOS2	A0A0J9YW53	1432 aa		33.21	■■■□□ 2.91
NFRKB-204	ENST00000526884	OVOS2	Q6IE36	1432 aa		33.21	■■■□□ 2.91
NFRKB-204	ENST00000526884	EVA1C	P58658	441 aa		33.2	■■■□□ 2.91
NFRKB-204	ENST00000526884	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
NFRKB-204	ENST00000526884	STRN4	Q9NRL3	753 aa		33.2	■■■□□ 2.91
NFRKB-204	ENST00000526884	KIF20B	Q96Q89	1820 aa		33.2	■■■□□ 2.91
NFRKB-204	ENST00000526884	ARHGEF25	Q86VW2	580 aa		33.18	■■■□□ 2.9
NFRKB-204	ENST00000526884	NME9	Q86XW9	330 aa		33.18	■■■□□ 2.9
NFRKB-204	ENST00000526884	FAM98C	Q17RN3	349 aa	Known RBP	33.17	■■■□□ 2.9
NFRKB-204	ENST00000526884	WNK3	Q9BYP7	1800 aa		33.16	■■■□□ 2.9
NFRKB-204	ENST00000526884	CRB1	P82279	1406 aa		33.15	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms