RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 CENPJQ9HC77 1338 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-203ENST00000526877 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-203ENST00000526877 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
SSSCA1-203ENST00000526877 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
SSSCA1-203ENST00000526877 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
SSSCA1-203ENST00000526877 USP47Q96K76 1375 aa17.75■□□□□ 0.43
SSSCA1-203ENST00000526877 UNC5CLQ8IV45 518 aa17.74■□□□□ 0.43
SSSCA1-203ENST00000526877 POLR3AO14802 1390 aaPredicted RBP17.74■□□□□ 0.43
SSSCA1-203ENST00000526877 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
SSSCA1-203ENST00000526877 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
SSSCA1-203ENST00000526877 GJD4Q96KN9 370 aaPredicted RBP17.73■□□□□ 0.43
SSSCA1-203ENST00000526877 ACEP12821 1306 aa17.72■□□□□ 0.43
SSSCA1-203ENST00000526877 QRICH2Q9H0J4 1663 aa17.72■□□□□ 0.43
SSSCA1-203ENST00000526877 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
SSSCA1-203ENST00000526877 CABP2Q9NPB3 220 aa17.71■□□□□ 0.43
SSSCA1-203ENST00000526877 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.43
SSSCA1-203ENST00000526877 NWD2Q9ULI1 1742 aa17.7■□□□□ 0.42
SSSCA1-203ENST00000526877 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
SSSCA1-203ENST00000526877 PLCH1Q4KWH8 1693 aa17.7■□□□□ 0.42
SSSCA1-203ENST00000526877 GLI3P10071 1580 aa17.7■□□□□ 0.42
SSSCA1-203ENST00000526877 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-203ENST00000526877 VPS72Q15906 364 aa17.67■□□□□ 0.42
SSSCA1-203ENST00000526877 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
SSSCA1-203ENST00000526877 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
SSSCA1-203ENST00000526877 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-203ENST00000526877 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
SSSCA1-203ENST00000526877 COL14A1Q05707 1796 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-203ENST00000526877 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
SSSCA1-203ENST00000526877 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
SSSCA1-203ENST00000526877 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
SSSCA1-203ENST00000526877 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
SSSCA1-203ENST00000526877 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
SSSCA1-203ENST00000526877 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
SSSCA1-203ENST00000526877 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
SSSCA1-203ENST00000526877 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-203ENST00000526877 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
SSSCA1-203ENST00000526877 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-203ENST00000526877 KIAA0232Q92628 1395 aa17.6■□□□□ 0.41
SSSCA1-203ENST00000526877 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
SSSCA1-203ENST00000526877 USP6P35125 1406 aa17.59■□□□□ 0.41
SSSCA1-203ENST00000526877 SBNO2Q9Y2G9 1366 aa17.59■□□□□ 0.41
SSSCA1-203ENST00000526877 USP19O94966 1318 aa17.59■□□□□ 0.41
SSSCA1-203ENST00000526877 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-203ENST00000526877 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
SSSCA1-203ENST00000526877 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
SSSCA1-203ENST00000526877 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
SSSCA1-203ENST00000526877 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-203ENST00000526877 TMF1P82094 1093 aa17.57■□□□□ 0.4
SSSCA1-203ENST00000526877 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
SSSCA1-203ENST00000526877 SPATA31A5Q5VU36 1347 aa17.56■□□□□ 0.4
SSSCA1-203ENST00000526877 SPATA31A7Q8IWB4 1347 aa17.56■□□□□ 0.4
SSSCA1-203ENST00000526877 EP400Q96L91 3159 aa17.56■□□□□ 0.4
SSSCA1-203ENST00000526877 TESK2Q96S53 571 aa17.56■□□□□ 0.4
SSSCA1-203ENST00000526877 NRKQ7Z2Y5 1582 aa17.56■□□□□ 0.4
SSSCA1-203ENST00000526877 CCDC7Q96M83 1385 aa17.55■□□□□ 0.4
SSSCA1-203ENST00000526877 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
SSSCA1-203ENST00000526877 C11orf95C9JLR9 678 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-203ENST00000526877 GCP02774 474 aa17.55■□□□□ 0.4
SSSCA1-203ENST00000526877 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-203ENST00000526877 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-203ENST00000526877 CPDO75976 1380 aa17.54■□□□□ 0.4
SSSCA1-203ENST00000526877 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
SSSCA1-203ENST00000526877 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
SSSCA1-203ENST00000526877 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
SSSCA1-203ENST00000526877 KIF7Q2M1P5 1343 aa17.53■□□□□ 0.4
SSSCA1-203ENST00000526877 CAMTA1Q9Y6Y1 1673 aa17.53■□□□□ 0.4
SSSCA1-203ENST00000526877 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-203ENST00000526877 CDCA8Q53HL2 280 aa17.53■□□□□ 0.4
SSSCA1-203ENST00000526877 NLRP6P59044 892 aa17.52■□□□□ 0.4
SSSCA1-203ENST00000526877 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-203ENST00000526877 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
SSSCA1-203ENST00000526877 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
SSSCA1-203ENST00000526877 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
SSSCA1-203ENST00000526877 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
SSSCA1-203ENST00000526877 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
SSSCA1-203ENST00000526877 KRT27Q7Z3Y8 459 aa17.51■□□□□ 0.39
SSSCA1-203ENST00000526877 SLIT3O75094 1523 aa17.51■□□□□ 0.39
SSSCA1-203ENST00000526877 THSD7AQ9UPZ6 1657 aa17.49■□□□□ 0.39
SSSCA1-203ENST00000526877 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-203ENST00000526877 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
SSSCA1-203ENST00000526877 CD163L1Q9NR16 1453 aa17.49■□□□□ 0.39
SSSCA1-203ENST00000526877 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
SSSCA1-203ENST00000526877 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
SSSCA1-203ENST00000526877 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
SSSCA1-203ENST00000526877 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
SSSCA1-203ENST00000526877 EVA1CP58658 441 aa17.47■□□□□ 0.39
SSSCA1-203ENST00000526877 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
SSSCA1-203ENST00000526877 SLC12A5Q9H2X9 1139 aa17.47■□□□□ 0.39
SSSCA1-203ENST00000526877 COL18A1P39060 1754 aa17.46■□□□□ 0.39
SSSCA1-203ENST00000526877 AATKQ6ZMQ8 1374 aa17.45■□□□□ 0.38
SSSCA1-203ENST00000526877 A0A0G2JS52 829 aa17.45■□□□□ 0.38
SSSCA1-203ENST00000526877 MYT1Q01538 1121 aa17.45■□□□□ 0.38
SSSCA1-203ENST00000526877 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
SSSCA1-203ENST00000526877 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
SSSCA1-203ENST00000526877 FAM182BQ5T319 152 aa17.43■□□□□ 0.38
SSSCA1-203ENST00000526877 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
SSSCA1-203ENST00000526877 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
SSSCA1-203ENST00000526877 USP35Q9P2H5 1018 aa17.43■□□□□ 0.38
SSSCA1-203ENST00000526877 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
SSSCA1-203ENST00000526877 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms