RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 KRT76Q01546 638 aa7.52□□□□□ -1.21
COPB1-205ENST00000526527 PTPRNQ16849 979 aa7.52□□□□□ -1.21
COPB1-205ENST00000526527 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
COPB1-205ENST00000526527 GPR161Q8N6U8 529 aaKnown RBP7.52□□□□□ -1.21
COPB1-205ENST00000526527 IGHA1P01876 353 aa7.51□□□□□ -1.21
COPB1-205ENST00000526527 C6orf118Q5T5N4 469 aa7.51□□□□□ -1.21
COPB1-205ENST00000526527 PCDHGC3Q9UN70 934 aa7.51□□□□□ -1.21
COPB1-205ENST00000526527 C6orf229H3BNL8 230 aa7.5□□□□□ -1.21
COPB1-205ENST00000526527 MAP2K5Q13163 448 aa7.5□□□□□ -1.21
COPB1-205ENST00000526527 NUTM1Q86Y26 1132 aa7.5□□□□□ -1.21
COPB1-205ENST00000526527 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
COPB1-205ENST00000526527 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
COPB1-205ENST00000526527 IRF6O14896 467 aa7.49□□□□□ -1.21
COPB1-205ENST00000526527 ZIC2O95409 532 aaPredicted RBP7.49□□□□□ -1.21
COPB1-205ENST00000526527 FDX1P10109 184 aa7.49□□□□□ -1.21
COPB1-205ENST00000526527 GPAT2Q6NUI2 795 aa7.49□□□□□ -1.21
COPB1-205ENST00000526527 FAM174AQ8TBP5 190 aa7.49□□□□□ -1.21
COPB1-205ENST00000526527 CDK15Q96Q40 435 aa7.49□□□□□ -1.21
COPB1-205ENST00000526527 ZFAND3Q9H8U3 227 aa7.49□□□□□ -1.21
COPB1-205ENST00000526527 ITPKCQ96DU7 683 aa7.48□□□□□ -1.21
COPB1-205ENST00000526527 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
COPB1-205ENST00000526527 BMP2P12643 396 aa7.47□□□□□ -1.21
COPB1-205ENST00000526527 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
COPB1-205ENST00000526527 SOS2Q07890 1332 aaPredicted RBP7.47□□□□□ -1.21
COPB1-205ENST00000526527 NR5A1Q13285 461 aa7.46□□□□□ -1.22
COPB1-205ENST00000526527 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
COPB1-205ENST00000526527 UPP2O95045 317 aa7.45□□□□□ -1.22
COPB1-205ENST00000526527 IRS1P35568 1242 aa7.45□□□□□ -1.22
COPB1-205ENST00000526527 ARID5BQ14865 1188 aa7.45□□□□□ -1.22
COPB1-205ENST00000526527 COL25A1Q9BXS0 654 aaPredicted RBP7.45□□□□□ -1.22
COPB1-205ENST00000526527 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
COPB1-205ENST00000526527 DNMT3LQ9UJW3 386 aa7.45□□□□□ -1.22
COPB1-205ENST00000526527 NR3C2P08235 984 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 GRM5P41594 1212 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 FOXK2Q01167 660 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 XP32Q5T750 250 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 SVOPQ8N4V2 548 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 PRR7Q8TB68 274 aa7.44□□□□□ -1.22
COPB1-205ENST00000526527 MINK1Q8N4C8 1332 aaPredicted RBP7.44□□□□□ -1.22
COPB1-205ENST00000526527 SPTLC1O15269 473 aa7.43□□□□□ -1.22
COPB1-205ENST00000526527 ARHGEF15O94989 841 aa7.43□□□□□ -1.22
COPB1-205ENST00000526527 CLCN1P35523 988 aa7.43□□□□□ -1.22
COPB1-205ENST00000526527 DESI1Q6ICB0 168 aa7.43□□□□□ -1.22
COPB1-205ENST00000526527 NANOS1Q8WY41 292 aaKnown RBP7.43□□□□□ -1.22
COPB1-205ENST00000526527 KANK3Q6NY19 840 aa7.42□□□□□ -1.22
COPB1-205ENST00000526527 MEIOBQ8N635 442 aa7.42□□□□□ -1.22
COPB1-205ENST00000526527 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
COPB1-205ENST00000526527 FOXJ1Q92949 421 aa7.42□□□□□ -1.22
COPB1-205ENST00000526527 SLURP2P0DP57 97 aa7.41□□□□□ -1.22
COPB1-205ENST00000526527 MARSP56192 900 aaKnown RBP7.41□□□□□ -1.22
COPB1-205ENST00000526527 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.41□□□□□ -1.22
COPB1-205ENST00000526527 RNFT1Q5M7Z0 435 aa7.41□□□□□ -1.22
COPB1-205ENST00000526527 NDUFV2P19404 249 aa7.4□□□□□ -1.22
COPB1-205ENST00000526527 CTHP32929 405 aa7.4□□□□□ -1.22
COPB1-205ENST00000526527 PTSQ03393 145 aa7.4□□□□□ -1.22
COPB1-205ENST00000526527 SPIRE2Q8WWL2 714 aa7.4□□□□□ -1.22
COPB1-205ENST00000526527 SPDYE5A6NIY4 337 aa7.39□□□□□ -1.23
COPB1-205ENST00000526527 LYPD8Q6UX82 237 aa7.39□□□□□ -1.23
COPB1-205ENST00000526527 SCARF2Q96GP6 870 aaPredicted RBP7.39□□□□□ -1.23
COPB1-205ENST00000526527 TSEN34Q9BSV6 310 aaKnown RBP7.39□□□□□ -1.23
COPB1-205ENST00000526527 TULP1O00294 542 aaPredicted RBP7.38□□□□□ -1.23
COPB1-205ENST00000526527 MTMR2Q13614 643 aa7.38□□□□□ -1.23
COPB1-205ENST00000526527 CCDC102AQ96A19 550 aa7.38□□□□□ -1.23
COPB1-205ENST00000526527 MOXD2PA6NHM9 499 aa7.37□□□□□ -1.23
COPB1-205ENST00000526527 TTLL8A6PVC2 850 aa7.37□□□□□ -1.23
COPB1-205ENST00000526527 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
COPB1-205ENST00000526527 VSIG10Q8N0Z9 540 aa7.37□□□□□ -1.23
COPB1-205ENST00000526527 CCDC155Q8N6L0 562 aa7.37□□□□□ -1.23
COPB1-205ENST00000526527 KRI1Q8N9T8 703 aaKnown RBP7.37□□□□□ -1.23
COPB1-205ENST00000526527 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
COPB1-205ENST00000526527 ADAM23O75077 832 aa7.35□□□□□ -1.23
COPB1-205ENST00000526527 SSTR3P32745 418 aaPredicted RBP7.35□□□□□ -1.23
COPB1-205ENST00000526527 AGERQ15109 404 aa7.35□□□□□ -1.23
COPB1-205ENST00000526527 BPHLQ86WA6 291 aaPredicted RBP7.35□□□□□ -1.23
COPB1-205ENST00000526527 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
COPB1-205ENST00000526527 SLC35F4A4IF30 521 aa7.34□□□□□ -1.23
COPB1-205ENST00000526527 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
COPB1-205ENST00000526527 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
COPB1-205ENST00000526527 MSTNO14793 375 aa7.32□□□□□ -1.24
COPB1-205ENST00000526527 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
COPB1-205ENST00000526527 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
COPB1-205ENST00000526527 MAP10Q9P2G4 905 aa7.32□□□□□ -1.24
COPB1-205ENST00000526527 EMILIN1Q9Y6C2 1016 aa7.32□□□□□ -1.24
COPB1-205ENST00000526527 SLC24A1O60721 1099 aa7.31□□□□□ -1.24
COPB1-205ENST00000526527 ITGA6P23229 1130 aa7.31□□□□□ -1.24
COPB1-205ENST00000526527 MAP4K5Q9Y4K4 846 aa7.31□□□□□ -1.24
COPB1-205ENST00000526527 SPINT1O43278 529 aa7.3□□□□□ -1.24
COPB1-205ENST00000526527 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
COPB1-205ENST00000526527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.3□□□□□ -1.24
COPB1-205ENST00000526527 C1QTNF2Q9BXJ5 285 aa7.3□□□□□ -1.24
COPB1-205ENST00000526527 CDC14CA4D256 554 aa7.29□□□□□ -1.24
COPB1-205ENST00000526527 CFAP99D6REC4 459 aa7.29□□□□□ -1.24
COPB1-205ENST00000526527 ADAMTS2O95450 1211 aa7.29□□□□□ -1.24
COPB1-205ENST00000526527 FSHRP23945 695 aa7.29□□□□□ -1.24
COPB1-205ENST00000526527 GJA5P36382 358 aa7.29□□□□□ -1.24
COPB1-205ENST00000526527 VASH1Q7L8A9 365 aaPredicted RBP7.29□□□□□ -1.24
COPB1-205ENST00000526527 Q6ZVU0 165 aa7.28□□□□□ -1.24
COPB1-205ENST00000526527 SH3RF1Q7Z6J0 888 aa7.28□□□□□ -1.24
COPB1-205ENST00000526527 CCDC116Q8IYX3 515 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms