RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 A0A0G2JS52 829 aa17.23■□□□□ 0.35
CAPN1-204ENST00000526468 MYT1Q01538 1121 aa17.23■□□□□ 0.35
CAPN1-204ENST00000526468 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
CAPN1-204ENST00000526468 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
CAPN1-204ENST00000526468 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
CAPN1-204ENST00000526468 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
CAPN1-204ENST00000526468 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
CAPN1-204ENST00000526468 DCAF11Q8TEB1 546 aa17.2■□□□□ 0.34
CAPN1-204ENST00000526468 WNK3Q9BYP7 1800 aa17.19■□□□□ 0.34
CAPN1-204ENST00000526468 KRT27Q7Z3Y8 459 aa17.17■□□□□ 0.34
CAPN1-204ENST00000526468 DEFB132Q7Z7B7 95 aa17.17■□□□□ 0.34
CAPN1-204ENST00000526468 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
CAPN1-204ENST00000526468 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-204ENST00000526468 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
CAPN1-204ENST00000526468 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
CAPN1-204ENST00000526468 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-204ENST00000526468 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
CAPN1-204ENST00000526468 RREB1Q92766 1687 aa17.15■□□□□ 0.34
CAPN1-204ENST00000526468 FAM98CQ17RN3 349 aaKnown RBP17.14■□□□□ 0.33
CAPN1-204ENST00000526468 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
CAPN1-204ENST00000526468 PARP4Q9UKK3 1724 aaKnown RBP17.13■□□□□ 0.33
CAPN1-204ENST00000526468 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
CAPN1-204ENST00000526468 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
CAPN1-204ENST00000526468 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
CAPN1-204ENST00000526468 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
CAPN1-204ENST00000526468 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-204ENST00000526468 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
CAPN1-204ENST00000526468 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
CAPN1-204ENST00000526468 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
CAPN1-204ENST00000526468 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
CAPN1-204ENST00000526468 BAG6P46379 1132 aa17.09■□□□□ 0.33
CAPN1-204ENST00000526468 STAC3Q96MF2 364 aa17.09■□□□□ 0.33
CAPN1-204ENST00000526468 PIK3C2AO00443 1686 aa17.08■□□□□ 0.32
CAPN1-204ENST00000526468 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
CAPN1-204ENST00000526468 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
CAPN1-204ENST00000526468 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-204ENST00000526468 DISP2A7MBM2 1401 aa17.06■□□□□ 0.32
CAPN1-204ENST00000526468 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
CAPN1-204ENST00000526468 RGPD3A6NKT7 1758 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-204ENST00000526468 RGPD4Q7Z3J3 1758 aa17.06■□□□□ 0.32
CAPN1-204ENST00000526468 CAMTA1Q9Y6Y1 1673 aa17.05■□□□□ 0.32
CAPN1-204ENST00000526468 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-204ENST00000526468 HRCP23327 699 aa17.05■□□□□ 0.32
CAPN1-204ENST00000526468 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
CAPN1-204ENST00000526468 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
CAPN1-204ENST00000526468 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
CAPN1-204ENST00000526468 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
CAPN1-204ENST00000526468 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
CAPN1-204ENST00000526468 CDK19Q9BWU1 502 aa17.04■□□□□ 0.32
CAPN1-204ENST00000526468 ACEP12821 1306 aa17.03■□□□□ 0.32
CAPN1-204ENST00000526468 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
CAPN1-204ENST00000526468 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
CAPN1-204ENST00000526468 ZC3H6P61129 1189 aaKnown RBP17.02■□□□□ 0.32
CAPN1-204ENST00000526468 COL18A1P39060 1754 aa17.02■□□□□ 0.31
CAPN1-204ENST00000526468 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
CAPN1-204ENST00000526468 EN1Q05925 392 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-204ENST00000526468 SLIT3O75094 1523 aa17.01■□□□□ 0.31
CAPN1-204ENST00000526468 LTN1O94822 1766 aa17■□□□□ 0.31
CAPN1-204ENST00000526468 USP35Q9P2H5 1018 aa17■□□□□ 0.31
CAPN1-204ENST00000526468 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-204ENST00000526468 USP19O94966 1318 aa16.99■□□□□ 0.31
CAPN1-204ENST00000526468 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-204ENST00000526468 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
CAPN1-204ENST00000526468 CCDC61Q9Y6R9 512 aa16.99■□□□□ 0.31
CAPN1-204ENST00000526468 CPDO75976 1380 aa16.99■□□□□ 0.31
CAPN1-204ENST00000526468 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
CAPN1-204ENST00000526468 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
CAPN1-204ENST00000526468 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
CAPN1-204ENST00000526468 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
CAPN1-204ENST00000526468 USP6P35125 1406 aa16.96■□□□□ 0.31
CAPN1-204ENST00000526468 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
CAPN1-204ENST00000526468 PARD3Q8TEW0 1356 aa16.95■□□□□ 0.3
CAPN1-204ENST00000526468 PLEKHG3A1L390 1219 aa16.95■□□□□ 0.3
CAPN1-204ENST00000526468 TRIM37O94972 964 aa16.95■□□□□ 0.3
CAPN1-204ENST00000526468 EVA1CP58658 441 aa16.95■□□□□ 0.3
CAPN1-204ENST00000526468 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
CAPN1-204ENST00000526468 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
CAPN1-204ENST00000526468 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
CAPN1-204ENST00000526468 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
CAPN1-204ENST00000526468 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-204ENST00000526468 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
CAPN1-204ENST00000526468 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
CAPN1-204ENST00000526468 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
CAPN1-204ENST00000526468 CRB1P82279 1406 aa16.93■□□□□ 0.3
CAPN1-204ENST00000526468 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
CAPN1-204ENST00000526468 BARGINQ6ZT62 677 aa16.92■□□□□ 0.3
CAPN1-204ENST00000526468 OVOS2A0A0G2JMS6 1433 aa16.91■□□□□ 0.3
CAPN1-204ENST00000526468 OVOS2A0A0J9YW53 1432 aa16.91■□□□□ 0.3
CAPN1-204ENST00000526468 OVOS2Q6IE36 1432 aa16.91■□□□□ 0.3
CAPN1-204ENST00000526468 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
CAPN1-204ENST00000526468 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
CAPN1-204ENST00000526468 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
CAPN1-204ENST00000526468 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
CAPN1-204ENST00000526468 APBA3O96018 575 aa16.89■□□□□ 0.29
CAPN1-204ENST00000526468 NFAT5O94916 1531 aa16.88■□□□□ 0.29
CAPN1-204ENST00000526468 ABCC6O95255 1503 aa16.88■□□□□ 0.29
CAPN1-204ENST00000526468 GCP02774 474 aa16.88■□□□□ 0.29
CAPN1-204ENST00000526468 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
CAPN1-204ENST00000526468 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
CAPN1-204ENST00000526468 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms