RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 ZKSCAN2Q63HK3 967 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 MYBBP1AQ9BQG0 1328 aaKnown RBP9.15□□□□□ -0.94
LRRK1-205ENST00000526457 NBPF1Q3BBV0 1214 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 LUC7LQ9NQ29 371 aaKnown RBP9.15□□□□□ -0.94
LRRK1-205ENST00000526457 SARNPP82979 210 aaKnown RBP9.15□□□□□ -0.95
LRRK1-205ENST00000526457 COG6Q9Y2V7 657 aa9.15□□□□□ -0.95
LRRK1-205ENST00000526457 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.95
LRRK1-205ENST00000526457 TXLNBQ8N3L3 684 aa9.14□□□□□ -0.95
LRRK1-205ENST00000526457 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
LRRK1-205ENST00000526457 CTR9Q6PD62 1173 aa9.14□□□□□ -0.95
LRRK1-205ENST00000526457 ROCK1Q13464 1354 aa9.14□□□□□ -0.95
LRRK1-205ENST00000526457 FIBPO43427 364 aa9.14□□□□□ -0.95
LRRK1-205ENST00000526457 CFAP57Q96MR6 1250 aa9.14□□□□□ -0.95
LRRK1-205ENST00000526457 SERPINC1P01008 464 aa9.14□□□□□ -0.95
LRRK1-205ENST00000526457 TNMDQ9H2S6 317 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 PSMD1Q99460 953 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 BCL2L13Q9BXK5 485 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 TMX4Q9H1E5 349 aaPredicted RBP9.13□□□□□ -0.95
LRRK1-205ENST00000526457 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 TTC31Q49AM3 519 aaPredicted RBP9.13□□□□□ -0.95
LRRK1-205ENST00000526457 JAKMIP3Q5VZ66 844 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 NFXL1Q6ZNB6 911 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 CNKSR2Q8WXI2 1034 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 TXLNAP40222 546 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 LMAN1P49257 510 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 DAAM2Q86T65 1068 aa9.13□□□□□ -0.95
LRRK1-205ENST00000526457 PAIP2Q9BPZ3 127 aaKnown RBP9.13□□□□□ -0.95
LRRK1-205ENST00000526457 C11orf95C9JLR9 678 aaPredicted RBP9.12□□□□□ -0.95
LRRK1-205ENST00000526457 BRD2P25440 801 aaKnown RBP9.12□□□□□ -0.95
LRRK1-205ENST00000526457 KIF18AQ8NI77 898 aa9.12□□□□□ -0.95
LRRK1-205ENST00000526457 CCDC175P0C221 793 aa9.12□□□□□ -0.95
LRRK1-205ENST00000526457 PDCP20941 246 aa9.12□□□□□ -0.95
LRRK1-205ENST00000526457 XPCQ01831 940 aaPredicted RBP9.12□□□□□ -0.95
LRRK1-205ENST00000526457 CCDC43Q96MW1 224 aaKnown RBP9.12□□□□□ -0.95
LRRK1-205ENST00000526457 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
LRRK1-205ENST00000526457 FILIP1Q7Z7B0 1213 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 NINLQ9Y2I6 1382 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 GTPBP4Q9BZE4 634 aaKnown RBP9.11□□□□□ -0.95
LRRK1-205ENST00000526457 ERCC6Q03468 1493 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 PTPN14Q15678 1187 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 PDS5BQ9NTI5 1447 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 CECR2Q9BXF3 1484 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 MCM3P25205 808 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 TRDNQ13061 729 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 SUDS3Q9H7L9 328 aaPredicted RBP9.11□□□□□ -0.95
LRRK1-205ENST00000526457 MIA2Q96PC5 1412 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 CBFA2T2O43439 604 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 CCDC148Q8NFR7 591 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 DDX19BQ9UMR2 479 aa9.11□□□□□ -0.95
LRRK1-205ENST00000526457 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
LRRK1-205ENST00000526457 KRT222Q8N1A0 295 aa9.1□□□□□ -0.95
LRRK1-205ENST00000526457 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
LRRK1-205ENST00000526457 RRP7AQ9Y3A4 280 aaKnown RBP9.1□□□□□ -0.95
LRRK1-205ENST00000526457 CNTLNQ9NXG0 1405 aa9.1□□□□□ -0.95
LRRK1-205ENST00000526457 CDC45O75419 566 aa9.1□□□□□ -0.95
LRRK1-205ENST00000526457 SWAP70Q9UH65 585 aa9.1□□□□□ -0.95
LRRK1-205ENST00000526457 FAM114A1Q8IWE2 563 aa9.1□□□□□ -0.95
LRRK1-205ENST00000526457 IVLP07476 585 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 SAFB2Q14151 953 aaKnown RBP eCLIP9.09□□□□□ -0.95
LRRK1-205ENST00000526457 MCM4P33991 863 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 STAMBPO95630 424 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 MSH5O43196 834 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 SMARCC1Q92922 1105 aaPredicted RBP9.09□□□□□ -0.95
LRRK1-205ENST00000526457 ZNF396Q96N95 335 aaPredicted RBP9.09□□□□□ -0.95
LRRK1-205ENST00000526457 CCDC113Q9H0I3 377 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 SMC1AQ14683 1233 aaKnown RBP9.09□□□□□ -0.95
LRRK1-205ENST00000526457 HSPA4P34932 840 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 PPM1EQ8WY54 764 aa9.09□□□□□ -0.95
LRRK1-205ENST00000526457 LNPKQ9C0E8 428 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 SYCP1Q15431 976 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 CCDC144AA2RUR9 1427 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 ARHGAP29Q52LW3 1261 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 BRMS1Q9HCU9 246 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 SEPT11Q9NVA2 429 aaKnown RBP9.08□□□□□ -0.96
LRRK1-205ENST00000526457 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 CASQ1P31415 396 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 ARID4AP29374 1257 aaPredicted RBP9.08□□□□□ -0.96
LRRK1-205ENST00000526457 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
LRRK1-205ENST00000526457 RBM28Q9NW13 759 aaKnown RBP9.08□□□□□ -0.96
LRRK1-205ENST00000526457 IFFO1Q0D2I5 559 aa9.08□□□□□ -0.96
LRRK1-205ENST00000526457 MPHOSPH10O00566 681 aaKnown RBP9.07□□□□□ -0.96
LRRK1-205ENST00000526457 EPB41L2O43491 1005 aaKnown RBP9.07□□□□□ -0.96
LRRK1-205ENST00000526457 IFIT2P09913 472 aaKnown RBP9.07□□□□□ -0.96
LRRK1-205ENST00000526457 MCM2P49736 904 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 SPECC1LQ69YQ0 1117 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 TERF2IPQ9NYB0 399 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 PLEKHH2Q8IVE3 1493 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 KRI1Q8N9T8 703 aaKnown RBP9.07□□□□□ -0.96
LRRK1-205ENST00000526457 CUL7Q14999 1698 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 CEP57Q86XR8 500 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 NAP1L3Q99457 506 aaPredicted RBP9.07□□□□□ -0.96
LRRK1-205ENST00000526457 CWC22Q9HCG8 908 aaKnown RBP9.07□□□□□ -0.96
LRRK1-205ENST00000526457 STIM1Q13586 685 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 NAA25Q14CX7 972 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 WASHC2AQ641Q2 1341 aa9.07□□□□□ -0.96
LRRK1-205ENST00000526457 WASHC2CQ9Y4E1 1318 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms